EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009232 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6716 bases
Position: chrreftig_58:1572995-1579710
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015721	MMR_HSR1	PF01926.23	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015900	-	1460	-	ENSCSAVP00000015721	430 (aa)	-	H2ZDQ5

Gene Model

Click here to download ENSCSAVG00000009232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009232's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009232	-	92	37.845	ENSG00000178605	GTPBP6	70	37.845	Homo_sapiens
ENSCSAVG00000009232	-	94	36.010	ENSAPOG00000001396	gtpbp6	70	36.010	Acanthochromis_polyacanthus
ENSCSAVG00000009232	-	92	39.206	ENSAMEG00000001958	GTPBP6	77	39.206	Ailuropoda_melanoleuca
ENSCSAVG00000009232	-	89	37.337	ENSACIG00000001694	gtpbp6	65	37.337	Amphilophus_citrinellus
ENSCSAVG00000009232	-	94	36.364	ENSAOCG00000014817	gtpbp6	70	36.364	Amphiprion_ocellaris
ENSCSAVG00000009232	-	94	36.364	ENSAPEG00000017894	gtpbp6	70	36.364	Amphiprion_percula
ENSCSAVG00000009232	-	92	36.591	ENSATEG00000012768	gtpbp6	68	36.591	Anabas_testudineus
ENSCSAVG00000009232	-	97	36.993	ENSAPLG00000005592	GTPBP6	94	36.993	Anas_platyrhynchos
ENSCSAVG00000009232	-	97	36.691	ENSACAG00000011834	GTPBP6	73	36.691	Anolis_carolinensis
ENSCSAVG00000009232	-	92	36.683	ENSACLG00000002216	gtpbp6	68	36.683	Astatotilapia_calliptera
ENSCSAVG00000009232	-	97	36.730	ENSAMXG00000012493	gtpbp6	78	36.730	Astyanax_mexicanus
ENSCSAVG00000009232	-	92	36.500	ENSBTAG00000054315	GTPBP6	73	35.250	Bos_taurus
ENSCSAVG00000009232	-	88	38.903	ENSCJAG00000013056	GTPBP6	97	38.903	Callithrix_jacchus
ENSCSAVG00000009232	-	97	35.782	ENSCAFG00000010931	GTPBP6	73	36.471	Canis_familiaris
ENSCSAVG00000009232	-	97	35.782	ENSCAFG00020001279	-	73	36.471	Canis_lupus_dingo
ENSCSAVG00000009232	-	97	35.782	ENSCAFG00020010766	-	73	36.471	Canis_lupus_dingo
ENSCSAVG00000009232	-	96	36.124	ENSCHIG00000000121	GTPBP6	74	36.124	Capra_hircus
ENSCSAVG00000009232	-	92	38.308	ENSCCAG00000032874	GTPBP6	74	37.143	Cebus_capucinus
ENSCSAVG00000009232	-	92	38.035	ENSCATG00000024945	GTPBP6	70	38.035	Cercocebus_atys
ENSCSAVG00000009232	-	57	40.816	ENSCLAG00000000054	-	82	40.816	Chinchilla_lanigera
ENSCSAVG00000009232	-	67	38.144	ENSCSAG00000018371	-	98	38.144	Chlorocebus_sabaeus
ENSCSAVG00000009232	-	97	37.410	ENSCPBG00000007520	GTPBP6	74	37.410	Chrysemys_picta_bellii
ENSCSAVG00000009232	-	97	64.916	ENSCING00000012867	-	75	64.916	Ciona_intestinalis
ENSCSAVG00000009232	-	90	38.402	ENSCGRG00001022411	Gtpbp6	70	38.402	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009232	-	90	38.402	ENSCGRG00000007715	Gtpbp6	82	38.402	Cricetulus_griseus_crigri
ENSCSAVG00000009232	-	91	38.071	ENSCSEG00000007271	gtpbp6	71	38.071	Cynoglossus_semilaevis
ENSCSAVG00000009232	-	95	36.408	ENSCVAG00000015417	gtpbp6	74	36.408	Cyprinodon_variegatus
ENSCSAVG00000009232	-	91	40.050	ENSDARG00000061091	gtpbp6	66	40.050	Danio_rerio
ENSCSAVG00000009232	-	92	34.550	FBgn0039339	CG5116	69	34.550	Drosophila_melanogaster
ENSCSAVG00000009232	-	97	35.800	ENSEBUG00000000404	gtpbp6	70	35.800	Eptatretus_burgeri
ENSCSAVG00000009232	-	87	38.845	ENSECAG00000032734	GTPBP6	66	38.845	Equus_caballus
ENSCSAVG00000009232	-	91	36.990	ENSELUG00000016376	gtpbp6	64	36.990	Esox_lucius
ENSCSAVG00000009232	-	88	38.421	ENSFCAG00000013263	-	67	38.421	Felis_catus
ENSCSAVG00000009232	-	96	34.450	ENSFCAG00000010310	-	98	38.351	Felis_catus
ENSCSAVG00000009232	-	98	35.211	ENSFALG00000004133	GTPBP6	82	34.965	Ficedula_albicollis
ENSCSAVG00000009232	-	94	37.561	ENSFHEG00000012018	gtpbp6	73	37.561	Fundulus_heteroclitus
ENSCSAVG00000009232	-	92	35.930	ENSGMOG00000004778	gtpbp6	90	35.930	Gadus_morhua
ENSCSAVG00000009232	-	98	36.235	ENSGALG00000016717	GTPBP6	97	36.235	Gallus_gallus
ENSCSAVG00000009232	-	94	36.829	ENSGAFG00000018158	gtpbp6	66	36.829	Gambusia_affinis
ENSCSAVG00000009232	-	95	36.105	ENSGACG00000013857	gtpbp6	95	35.581	Gasterosteus_aculeatus
ENSCSAVG00000009232	-	90	39.541	ENSGAGG00000021606	GTPBP6	68	39.541	Gopherus_agassizii
ENSCSAVG00000009232	-	69	39.130	ENSGGOG00000002792	-	92	39.130	Gorilla_gorilla
ENSCSAVG00000009232	-	92	36.935	ENSHBUG00000013113	gtpbp6	68	36.935	Haplochromis_burtoni
ENSCSAVG00000009232	-	97	37.381	ENSHGLG00000000207	GTPBP6	75	37.081	Heterocephalus_glaber_female
ENSCSAVG00000009232	-	87	39.096	ENSHGLG00100000320	GTPBP6	95	39.096	Heterocephalus_glaber_male
ENSCSAVG00000009232	-	64	41.091	ENSHCOG00000012544	gtpbp6	78	41.091	Hippocampus_comes
ENSCSAVG00000009232	-	98	37.500	ENSIPUG00000022531	gtpbp6	69	38.293	Ictalurus_punctatus
ENSCSAVG00000009232	-	94	36.740	ENSKMAG00000016464	gtpbp6	72	36.740	Kryptolebias_marmoratus
ENSCSAVG00000009232	-	97	36.085	ENSLBEG00000024203	gtpbp6	73	36.085	Labrus_bergylta
ENSCSAVG00000009232	-	91	39.286	ENSLACG00000012754	GTPBP6	65	39.286	Latimeria_chalumnae
ENSCSAVG00000009232	-	99	36.842	ENSLOCG00000008009	gtpbp6	82	36.842	Lepisosteus_oculatus
ENSCSAVG00000009232	-	96	36.516	ENSMFAG00000041568	GTPBP6	74	36.516	Macaca_fascicularis
ENSCSAVG00000009232	-	69	36.877	ENSMNEG00000039609	GTPBP6	54	36.877	Macaca_nemestrina
ENSCSAVG00000009232	-	92	37.531	ENSMAMG00000012631	gtpbp6	69	37.531	Mastacembelus_armatus
ENSCSAVG00000009232	-	92	36.683	ENSMZEG00005002869	gtpbp6	68	36.683	Maylandia_zebra
ENSCSAVG00000009232	-	71	42.581	ENSMGAG00000014752	GTPBP6	87	37.824	Meleagris_gallopavo
ENSCSAVG00000009232	-	97	35.198	ENSMMOG00000005950	gtpbp6	74	35.198	Mola_mola
ENSCSAVG00000009232	-	86	40.970	ENSMODG00000000326	GTPBP6	72	40.970	Monodelphis_domestica
ENSCSAVG00000009232	-	95	35.835	ENSMALG00000014993	gtpbp6	71	35.835	Monopterus_albus
ENSCSAVG00000009232	-	97	36.256	MGP_CAROLIEiJ_G0027536	Gtpbp6	75	36.256	Mus_caroli
ENSCSAVG00000009232	-	91	38.325	ENSMUSG00000033434	Gtpbp6	75	36.817	Mus_musculus
ENSCSAVG00000009232	-	97	36.580	MGP_SPRETEiJ_G0028534	Gtpbp6	75	36.580	Mus_spretus
ENSCSAVG00000009232	-	92	37.438	ENSMPUG00000001536	GTPBP6	78	37.438	Mustela_putorius_furo
ENSCSAVG00000009232	-	93	37.531	ENSNGAG00000011609	Gtpbp6	72	37.531	Nannospalax_galili
ENSCSAVG00000009232	-	92	36.683	ENSNBRG00000017629	gtpbp6	68	36.683	Neolamprologus_brichardi
ENSCSAVG00000009232	-	52	43.363	ENSMEUG00000001355	-	60	43.363	Notamacropus_eugenii
ENSCSAVG00000009232	-	84	37.912	ENSODEG00000001052	GTPBP6	67	37.912	Octodon_degus
ENSCSAVG00000009232	-	92	37.437	ENSONIG00000007330	gtpbp6	69	37.437	Oreochromis_niloticus
ENSCSAVG00000009232	-	91	31.218	ENSOANG00000007007	-	79	31.218	Ornithorhynchus_anatinus
ENSCSAVG00000009232	-	93	36.946	ENSOCUG00000008245	GTPBP6	71	36.946	Oryctolagus_cuniculus
ENSCSAVG00000009232	-	92	37.280	ENSORLG00000016077	gtpbp6	70	37.280	Oryzias_latipes
ENSCSAVG00000009232	-	92	37.280	ENSORLG00020018687	gtpbp6	70	37.531	Oryzias_latipes_hni
ENSCSAVG00000009232	-	92	37.531	ENSORLG00015014255	gtpbp6	70	37.531	Oryzias_latipes_hsok
ENSCSAVG00000009232	-	97	35.952	ENSOMEG00000004496	gtpbp6	74	35.952	Oryzias_melastigma
ENSCSAVG00000009232	-	96	36.429	ENSOGAG00000011327	GTPBP6	85	36.429	Otolemur_garnettii
ENSCSAVG00000009232	-	96	33.568	ENSOARG00000000946	GTPBP6	94	33.333	Ovis_aries
ENSCSAVG00000009232	-	86	39.024	ENSPPAG00000028400	-	74	39.024	Pan_paniscus
ENSCSAVG00000009232	-	96	33.729	ENSPPRG00000004932	-	75	33.729	Panthera_pardus
ENSCSAVG00000009232	-	92	38.095	ENSPTRG00000050696	GTPBP6	70	38.095	Pan_troglodytes
ENSCSAVG00000009232	-	88	37.958	ENSPANG00000011580	GTPBP6	67	37.958	Papio_anubis
ENSCSAVG00000009232	-	91	38.131	ENSPKIG00000022514	gtpbp6	64	38.131	Paramormyrops_kingsleyae
ENSCSAVG00000009232	-	97	36.754	ENSPSIG00000013117	GTPBP6	96	36.754	Pelodiscus_sinensis
ENSCSAVG00000009232	-	91	37.755	ENSPMAG00000006496	gtpbp6	89	37.755	Petromyzon_marinus
ENSCSAVG00000009232	-	86	39.623	ENSPCIG00000016456	GTPBP6	72	38.400	Phascolarctos_cinereus
ENSCSAVG00000009232	-	94	37.317	ENSPFOG00000015695	gtpbp6	94	36.829	Poecilia_formosa
ENSCSAVG00000009232	-	95	37.470	ENSPLAG00000015495	gtpbp6	73	37.470	Poecilia_latipinna
ENSCSAVG00000009232	-	94	36.829	ENSPMEG00000000859	gtpbp6	72	36.829	Poecilia_mexicana
ENSCSAVG00000009232	-	94	36.585	ENSPREG00000017643	gtpbp6	72	36.585	Poecilia_reticulata
ENSCSAVG00000009232	-	69	39.465	ENSPPYG00000020075	-	96	39.465	Pongo_abelii
ENSCSAVG00000009232	-	92	36.683	ENSPNYG00000000521	gtpbp6	67	36.683	Pundamilia_nyererei
ENSCSAVG00000009232	-	92	38.539	ENSPNAG00000002094	gtpbp6	66	38.539	Pygocentrus_nattereri
ENSCSAVG00000009232	-	91	36.735	ENSRNOG00000037426	Gtpbp6	70	36.735	Rattus_norvegicus
ENSCSAVG00000009232	-	91	36.735	ENSRNOG00000048168	Gtpbp6	70	36.735	Rattus_norvegicus
ENSCSAVG00000009232	-	96	36.730	ENSRBIG00000027538	GTPBP6	74	36.730	Rhinopithecus_bieti
ENSCSAVG00000009232	-	96	36.967	ENSRROG00000033503	GTPBP6	74	36.967	Rhinopithecus_roxellana
ENSCSAVG00000009232	-	86	40.701	ENSSHAG00000015570	GTPBP6	65	40.701	Sarcophilus_harrisii
ENSCSAVG00000009232	-	97	36.407	ENSSFOG00015004098	gtpbp6	69	36.407	Scleropages_formosus
ENSCSAVG00000009232	-	92	36.935	ENSSMAG00000019520	gtpbp6	68	36.935	Scophthalmus_maximus
ENSCSAVG00000009232	-	92	36.790	ENSSDUG00000002202	gtpbp6	67	36.790	Seriola_dumerili
ENSCSAVG00000009232	-	92	36.790	ENSSLDG00000023633	gtpbp6	75	36.790	Seriola_lalandi_dorsalis
ENSCSAVG00000009232	-	97	38.849	ENSSPUG00000005537	GTPBP6	75	38.849	Sphenodon_punctatus
ENSCSAVG00000009232	-	66	37.500	ENSSPAG00000017331	gtpbp6	85	37.500	Stegastes_partitus
ENSCSAVG00000009232	-	94	36.124	ENSSPAG00000017406	gtpbp6	70	36.124	Stegastes_partitus
ENSCSAVG00000009232	-	97	35.915	ENSSSCG00000033858	-	68	42.088	Sus_scrofa
ENSCSAVG00000009232	-	97	35.915	ENSSSCG00000037491	-	78	35.922	Sus_scrofa
ENSCSAVG00000009232	-	98	35.597	ENSTGUG00000010642	-	87	35.597	Taeniopygia_guttata
ENSCSAVG00000009232	-	95	36.893	ENSTRUG00000011175	gtpbp6	74	36.893	Takifugu_rubripes
ENSCSAVG00000009232	-	97	36.449	ENSTNIG00000010659	gtpbp6	90	36.131	Tetraodon_nigroviridis
ENSCSAVG00000009232	-	97	36.643	ENSUMAG00000018848	GTPBP6	95	36.643	Ursus_maritimus
ENSCSAVG00000009232	-	97	30.103	ENSVVUG00000008199	GTPBP6	70	30.328	Vulpes_vulpes
ENSCSAVG00000009232	-	91	40.102	ENSXETG00000004125	gtpbp6	68	40.102	Xenopus_tropicalis
ENSCSAVG00000009232	-	94	36.829	ENSXMAG00000015980	gtpbp6	72	36.829	Xiphophorus_maculatus