EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009298 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 2253 bases
Position: chrreftig_1:1685215-1687467
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015817	WGG	PF10273.9	3.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000015996	-	756	-	ENSCSAVP00000015817	192 (aa)	-	H2ZE01

Gene Model

Click here to download ENSCSAVG00000009298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009298's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009298	-	53	39.216	ENSG00000158526	TSR2	96	31.250	Homo_sapiens
ENSCSAVG00000009298	-	99	31.683	ENSAMEG00000002469	TSR2	100	31.683	Ailuropoda_melanoleuca
ENSCSAVG00000009298	-	59	33.333	ENSACIG00000004880	tsr2	79	33.333	Amphilophus_citrinellus
ENSCSAVG00000009298	-	59	32.456	ENSAOCG00000015893	tsr2	63	32.456	Amphiprion_ocellaris
ENSCSAVG00000009298	-	56	41.121	ENSACAG00000012270	TSR2	95	33.690	Anolis_carolinensis
ENSCSAVG00000009298	-	53	42.157	ENSANAG00000000062	TSR2	96	33.333	Aotus_nancymaae
ENSCSAVG00000009298	-	56	33.333	ENSACLG00000014269	tsr2	58	33.333	Astatotilapia_calliptera
ENSCSAVG00000009298	-	95	33.679	ENSBTAG00000015858	TSR2	95	33.679	Bos_taurus
ENSCSAVG00000009298	-	95	31.551	ENSCJAG00000000251	TSR2	96	32.804	Callithrix_jacchus
ENSCSAVG00000009298	-	99	30.808	ENSCAFG00000016440	TSR2	100	30.808	Canis_familiaris
ENSCSAVG00000009298	-	99	30.808	ENSCAFG00020014044	TSR2	100	30.808	Canis_lupus_dingo
ENSCSAVG00000009298	-	98	32.292	ENSTSYG00000005670	-	98	32.292	Carlito_syrichta
ENSCSAVG00000009298	-	95	31.217	ENSCPOG00000033139	TSR2	94	31.915	Cavia_porcellus
ENSCSAVG00000009298	-	57	39.286	ENSCCAG00000025421	TSR2	96	33.505	Cebus_capucinus
ENSCSAVG00000009298	-	57	37.500	ENSCATG00000036868	-	96	32.632	Cercocebus_atys
ENSCSAVG00000009298	-	53	37.255	ENSCATG00000045152	-	93	31.183	Cercocebus_atys
ENSCSAVG00000009298	-	99	32.308	ENSCLAG00000007235	TSR2	99	32.308	Chinchilla_lanigera
ENSCSAVG00000009298	-	91	33.516	ENSCSAG00000000402	-	93	33.149	Chlorocebus_sabaeus
ENSCSAVG00000009298	-	57	37.500	ENSCSAG00000012366	-	59	37.500	Chlorocebus_sabaeus
ENSCSAVG00000009298	-	99	30.964	ENSCHOG00000001068	TSR2	100	32.828	Choloepus_hoffmanni
ENSCSAVG00000009298	-	100	67.010	ENSCING00000002386	-	100	67.010	Ciona_intestinalis
ENSCSAVG00000009298	-	57	37.500	ENSCANG00000043156	-	96	32.632	Colobus_angolensis_palliatus
ENSCSAVG00000009298	-	95	33.684	ENSCGRG00001023321	Tsr2	95	34.211	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009298	-	95	32.642	ENSCGRG00000010855	Tsr2	95	33.161	Cricetulus_griseus_crigri
ENSCSAVG00000009298	-	94	31.351	ENSDARG00000005772	tsr2	95	31.351	Danio_rerio
ENSCSAVG00000009298	-	99	34.021	ENSDORG00000025574	Tsr2	99	34.021	Dipodomys_ordii
ENSCSAVG00000009298	-	99	31.683	ENSETEG00000018510	TSR2	96	32.474	Echinops_telfairi
ENSCSAVG00000009298	-	55	41.905	ENSEBUG00000012895	tsr2	92	33.702	Eptatretus_burgeri
ENSCSAVG00000009298	-	99	32.338	ENSEASG00005013005	TSR2	99	32.338	Equus_asinus_asinus
ENSCSAVG00000009298	-	99	32.338	ENSECAG00000029844	TSR2	86	32.338	Equus_caballus
ENSCSAVG00000009298	-	99	31.472	ENSFCAG00000002226	TSR2	100	31.472	Felis_catus
ENSCSAVG00000009298	-	94	32.447	ENSFDAG00000011554	TSR2	94	32.447	Fukomys_damarensis
ENSCSAVG00000009298	-	55	40.566	ENSGAGG00000007629	TSR2	93	32.759	Gopherus_agassizii
ENSCSAVG00000009298	-	53	39.216	ENSGGOG00000041368	TSR2	96	31.250	Gorilla_gorilla
ENSCSAVG00000009298	-	95	32.609	ENSHGLG00000002188	TSR2	95	32.609	Heterocephalus_glaber_female
ENSCSAVG00000009298	-	95	32.609	ENSHGLG00100001234	TSR2	95	32.609	Heterocephalus_glaber_male
ENSCSAVG00000009298	-	99	30.500	ENSSTOG00000033612	TSR2	99	30.500	Ictidomys_tridecemlineatus
ENSCSAVG00000009298	-	52	41.000	ENSJJAG00000004561	Tsr2	94	30.526	Jaculus_jaculus
ENSCSAVG00000009298	-	53	38.614	ENSLAFG00000018093	TSR2	95	30.964	Loxodonta_africana
ENSCSAVG00000009298	-	57	37.500	ENSMFAG00000001364	TSR2	96	32.632	Macaca_fascicularis
ENSCSAVG00000009298	-	53	38.235	ENSMMUG00000010044	-	94	30.726	Macaca_mulatta
ENSCSAVG00000009298	-	57	37.500	ENSMMUG00000012612	TSR2	97	32.948	Macaca_mulatta
ENSCSAVG00000009298	-	57	37.500	ENSMNEG00000041996	TSR2	96	32.632	Macaca_nemestrina
ENSCSAVG00000009298	-	57	37.500	ENSMLEG00000032632	TSR2	96	32.632	Mandrillus_leucophaeus
ENSCSAVG00000009298	-	53	41.176	ENSMAUG00000012389	Tsr2	52	41.176	Mesocricetus_auratus
ENSCSAVG00000009298	-	98	31.795	ENSMICG00000010116	TSR2	98	31.795	Microcebus_murinus
ENSCSAVG00000009298	-	94	33.158	ENSMOCG00000006662	Tsr2	94	33.158	Microtus_ochrogaster
ENSCSAVG00000009298	-	94	31.443	MGP_CAROLIEiJ_G0033491	Tsr2	94	31.443	Mus_caroli
ENSCSAVG00000009298	-	94	32.632	ENSMUSG00000025264	Tsr2	94	32.632	Mus_musculus
ENSCSAVG00000009298	-	94	31.443	MGP_PahariEiJ_G0032030	Tsr2	94	31.443	Mus_pahari
ENSCSAVG00000009298	-	94	32.632	MGP_SPRETEiJ_G0034661	Tsr2	94	32.632	Mus_spretus
ENSCSAVG00000009298	-	95	32.447	ENSMPUG00000011436	TSR2	96	32.447	Mustela_putorius_furo
ENSCSAVG00000009298	-	96	31.746	ENSMLUG00000010613	TSR2	97	31.746	Myotis_lucifugus
ENSCSAVG00000009298	-	52	42.000	ENSNGAG00000021351	Tsr2	94	33.854	Nannospalax_galili
ENSCSAVG00000009298	-	57	37.500	ENSNLEG00000030041	TSR2	96	31.250	Nomascus_leucogenys
ENSCSAVG00000009298	-	95	32.065	ENSODEG00000014931	-	99	32.065	Octodon_degus
ENSCSAVG00000009298	-	88	30.588	ENSODEG00000019951	-	97	30.588	Octodon_degus
ENSCSAVG00000009298	-	95	31.720	ENSODEG00000000542	-	95	31.720	Octodon_degus
ENSCSAVG00000009298	-	96	31.383	ENSONIG00000000763	tsr2	99	31.383	Oreochromis_niloticus
ENSCSAVG00000009298	-	59	38.261	ENSOANG00000000707	TSR2	82	38.261	Ornithorhynchus_anatinus
ENSCSAVG00000009298	-	99	32.500	ENSOCUG00000027678	-	100	32.500	Oryctolagus_cuniculus
ENSCSAVG00000009298	-	86	33.523	ENSOCUG00000014714	-	100	33.523	Oryctolagus_cuniculus
ENSCSAVG00000009298	-	95	31.414	ENSOGAG00000003468	TSR2	96	31.414	Otolemur_garnettii
ENSCSAVG00000009298	-	95	32.632	ENSOARG00000006467	-	95	32.632	Ovis_aries
ENSCSAVG00000009298	-	92	31.250	ENSOARG00000009487	-	95	31.250	Ovis_aries
ENSCSAVG00000009298	-	53	39.216	ENSPPAG00000021242	TSR2	96	31.250	Pan_paniscus
ENSCSAVG00000009298	-	99	31.472	ENSPPRG00000001337	TSR2	100	31.472	Panthera_pardus
ENSCSAVG00000009298	-	99	31.188	ENSPTIG00000007138	TSR2	99	31.188	Panthera_tigris_altaica
ENSCSAVG00000009298	-	53	39.216	ENSPTRG00000045904	TSR2	96	31.250	Pan_troglodytes
ENSCSAVG00000009298	-	57	37.500	ENSPANG00000008042	-	96	32.632	Papio_anubis
ENSCSAVG00000009298	-	53	37.624	ENSPANG00000002291	-	96	30.337	Papio_anubis
ENSCSAVG00000009298	-	94	32.105	ENSPEMG00000015713	Tsr2	94	32.804	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009298	-	93	31.383	ENSPMAG00000001705	tsr2	93	31.383	Petromyzon_marinus
ENSCSAVG00000009298	-	93	32.804	ENSPCIG00000024314	-	91	32.804	Phascolarctos_cinereus
ENSCSAVG00000009298	-	99	30.612	ENSPFOG00000011824	tsr2	100	30.612	Poecilia_formosa
ENSCSAVG00000009298	-	99	31.250	ENSPLAG00000023520	tsr2	100	31.250	Poecilia_latipinna
ENSCSAVG00000009298	-	99	31.250	ENSPMEG00000000360	tsr2	100	31.250	Poecilia_mexicana
ENSCSAVG00000009298	-	99	31.414	ENSPREG00000013009	tsr2	100	31.414	Poecilia_reticulata
ENSCSAVG00000009298	-	60	36.522	ENSPPYG00000020381	-	69	31.250	Pongo_abelii
ENSCSAVG00000009298	-	98	31.771	ENSPCOG00000002354	TSR2	98	31.771	Propithecus_coquereli
ENSCSAVG00000009298	-	56	35.514	ENSPNAG00000024167	tsr2	95	30.811	Pygocentrus_nattereri
ENSCSAVG00000009298	-	94	31.915	ENSRNOG00000002556	NEWGENE_1562416	94	31.915	Rattus_norvegicus
ENSCSAVG00000009298	-	57	37.500	ENSRBIG00000024521	-	96	32.632	Rhinopithecus_bieti
ENSCSAVG00000009298	-	57	37.500	ENSRROG00000029439	-	96	32.632	Rhinopithecus_roxellana
ENSCSAVG00000009298	-	57	39.286	ENSSBOG00000019737	TSR2	96	33.505	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009298	-	86	35.028	ENSSHAG00000004824	-	100	35.028	Sarcophilus_harrisii
ENSCSAVG00000009298	-	55	35.849	ENSSFOG00015002207	tsr2	95	30.851	Scleropages_formosus
ENSCSAVG00000009298	-	59	38.261	ENSSPUG00000019286	TSR2	100	30.729	Sphenodon_punctatus
ENSCSAVG00000009298	-	95	34.921	ENSSSCG00000012334	TSR2	95	34.921	Sus_scrofa
ENSCSAVG00000009298	-	57	38.182	ENSTBEG00000016242	TSR2	75	38.182	Tupaia_belangeri
ENSCSAVG00000009298	-	94	31.383	ENSUAMG00000009605	TSR2	95	31.383	Ursus_americanus
ENSCSAVG00000009298	-	94	31.383	ENSUMAG00000019189	TSR2	95	31.383	Ursus_maritimus
ENSCSAVG00000009298	-	94	30.481	ENSVPAG00000007532	TSR2	100	30.481	Vicugna_pacos
ENSCSAVG00000009298	-	99	30.303	ENSVVUG00000002247	TSR2	99	30.303	Vulpes_vulpes
ENSCSAVG00000009298	-	55	40.952	ENSXETG00000033574	TSR2	95	32.609	Xenopus_tropicalis
ENSCSAVG00000009298	-	99	30.890	ENSXMAG00000024827	tsr2	91	30.890	Xiphophorus_maculatus