EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009337 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 9032 bases
Position: chrreftig_1:1742213-1751244
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015880	SART-1	PF03343.13	7e-139	1	1
ENSCSAVP00000015879	SART-1	PF03343.13	2e-137	1	1
ENSCSAVP00000015881	SART-1	PF03343.13	2.3e-121	1	2
ENSCSAVP00000015881	SART-1	PF03343.13	2.3e-121	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016058	-	2449	-	ENSCSAVP00000015879	776 (aa)	-	H2ZE63
ENSCSAVT00000016059	-	2448	-	ENSCSAVP00000015880	766 (aa)	-	H2ZE64
ENSCSAVT00000016060	-	2278	-	ENSCSAVP00000015881	745 (aa)	-	H2ZE65

Gene Model

Click here to download ENSCSAVG00000009337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009337	-	86	38.061	ENSG00000175467	SART1	91	35.606	Homo_sapiens
ENSCSAVG00000009337	-	93	36.915	ENSANAG00000037219	SART1	83	69.697	Aotus_nancymaae
ENSCSAVG00000009337	-	93	36.626	ENSBTAG00000003094	SART1	94	35.309	Bos_taurus
ENSCSAVG00000009337	-	91	37.430	WBGene00017605	F19F10.9	52	47.222	Caenorhabditis_elegans
ENSCSAVG00000009337	-	87	38.319	ENSCJAG00000001741	SART1	91	35.525	Callithrix_jacchus
ENSCSAVG00000009337	-	85	38.127	ENSCAFG00000013103	SART1	94	34.667	Canis_familiaris
ENSCSAVG00000009337	-	85	38.796	ENSCAFG00020015337	SART1	94	34.909	Canis_lupus_dingo
ENSCSAVG00000009337	-	92	36.552	ENSCHIG00000016364	SART1	94	34.826	Capra_hircus
ENSCSAVG00000009337	-	65	50.838	ENSTSYG00000029994	SART1	91	35.775	Carlito_syrichta
ENSCSAVG00000009337	-	92	37.311	ENSCAPG00000016369	SART1	95	37.931	Cavia_aperea
ENSCSAVG00000009337	-	93	37.534	ENSCPOG00000020882	SART1	98	37.907	Cavia_porcellus
ENSCSAVG00000009337	-	93	36.900	ENSCCAG00000037852	SART1	83	69.697	Cebus_capucinus
ENSCSAVG00000009337	-	98	36.693	ENSCATG00000032953	SART1	88	69.697	Cercocebus_atys
ENSCSAVG00000009337	-	99	35.432	ENSCLAG00000016593	SART1	95	34.504	Chinchilla_lanigera
ENSCSAVG00000009337	-	98	37.032	ENSCSAG00000008081	SART1	91	36.020	Chlorocebus_sabaeus
ENSCSAVG00000009337	-	93	37.772	ENSCPBG00000023434	SART1	93	36.983	Chrysemys_picta_bellii
ENSCSAVG00000009337	-	100	64.423	ENSCING00000009048	-	98	64.865	Ciona_intestinalis
ENSCSAVG00000009337	-	95	34.003	ENSCANG00000043164	SART1	91	32.980	Colobus_angolensis_palliatus
ENSCSAVG00000009337	-	99	35.347	ENSCGRG00001021367	Sart1	94	35.618	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009337	-	93	36.906	ENSCGRG00000015292	Sart1	96	36.533	Cricetulus_griseus_crigri
ENSCSAVG00000009337	-	99	37.687	ENSCVAG00000009800	SART1	98	36.492	Cyprinodon_variegatus
ENSCSAVG00000009337	-	81	30.685	ENSDNOG00000041860	-	88	32.231	Dasypus_novemcinctus
ENSCSAVG00000009337	-	99	35.955	ENSDORG00000011887	Sart1	95	35.556	Dipodomys_ordii
ENSCSAVG00000009337	-	94	32.513	FBgn0032388	CG6686	78	32.552	Drosophila_melanogaster
ENSCSAVG00000009337	-	71	31.615	ENSEBUG00000006203	SART1	93	33.449	Eptatretus_burgeri
ENSCSAVG00000009337	-	85	38.796	ENSEASG00005004465	SART1	90	35.354	Equus_asinus_asinus
ENSCSAVG00000009337	-	86	41.176	ENSFCAG00000013278	SART1	94	35.018	Felis_catus
ENSCSAVG00000009337	-	99	36.121	ENSFDAG00000008891	SART1	95	35.910	Fukomys_damarensis
ENSCSAVG00000009337	-	99	37.841	ENSFHEG00000010334	SART1	98	35.881	Fundulus_heteroclitus
ENSCSAVG00000009337	-	99	37.687	ENSGAFG00000013919	SART1	96	36.607	Gambusia_affinis
ENSCSAVG00000009337	-	97	36.894	ENSGACG00000016951	SART1	96	36.504	Gasterosteus_aculeatus
ENSCSAVG00000009337	-	93	37.415	ENSGAGG00000022783	SART1	93	37.010	Gopherus_agassizii
ENSCSAVG00000009337	-	93	36.799	ENSGGOG00000009457	SART1	84	69.697	Gorilla_gorilla
ENSCSAVG00000009337	-	99	36.707	ENSHGLG00000015022	SART1	94	35.828	Heterocephalus_glaber_female
ENSCSAVG00000009337	-	98	37.014	ENSHGLG00100018346	SART1	94	35.837	Heterocephalus_glaber_male
ENSCSAVG00000009337	-	99	37.626	ENSHCOG00000007259	SART1	97	37.838	Hippocampus_comes
ENSCSAVG00000009337	-	99	37.759	ENSIPUG00000021117	sart1	98	37.161	Ictalurus_punctatus
ENSCSAVG00000009337	-	98	36.151	ENSSTOG00000023375	SART1	99	35.358	Ictidomys_tridecemlineatus
ENSCSAVG00000009337	-	98	36.411	ENSJJAG00000019103	Sart1	95	34.545	Jaculus_jaculus
ENSCSAVG00000009337	-	87	37.026	ENSLACG00000011165	SART1	96	37.578	Latimeria_chalumnae
ENSCSAVG00000009337	-	66	34.825	ENSLOCG00000001871	SART1	93	35.992	Lepisosteus_oculatus
ENSCSAVG00000009337	-	99	36.902	ENSLAFG00000001768	SART1	95	35.587	Loxodonta_africana
ENSCSAVG00000009337	-	98	36.693	ENSMFAG00000002484	SART1	88	69.697	Macaca_fascicularis
ENSCSAVG00000009337	-	98	36.693	ENSMNEG00000035507	SART1	88	69.697	Macaca_nemestrina
ENSCSAVG00000009337	-	98	36.693	ENSMLEG00000036259	SART1	98	36.026	Mandrillus_leucophaeus
ENSCSAVG00000009337	-	98	36.434	ENSMAUG00000016274	Sart1	94	35.662	Mesocricetus_auratus
ENSCSAVG00000009337	-	99	36.625	ENSMICG00000030096	SART1	95	35.112	Microcebus_murinus
ENSCSAVG00000009337	-	87	37.588	ENSMOCG00000019815	Sart1	94	35.523	Microtus_ochrogaster
ENSCSAVG00000009337	-	87	39.311	ENSMMOG00000004019	SART1	97	35.207	Mola_mola
ENSCSAVG00000009337	-	76	37.604	ENSMODG00000009047	SART1	71	38.137	Monodelphis_domestica
ENSCSAVG00000009337	-	99	36.029	MGP_CAROLIEiJ_G0022545	Sart1	94	35.135	Mus_caroli
ENSCSAVG00000009337	-	99	36.152	ENSMUSG00000039148	Sart1	94	35.258	Mus_musculus
ENSCSAVG00000009337	-	99	36.264	MGP_PahariEiJ_G0014042	Sart1	95	35.158	Mus_pahari
ENSCSAVG00000009337	-	99	36.152	MGP_SPRETEiJ_G0023459	Sart1	94	35.258	Mus_spretus
ENSCSAVG00000009337	-	93	36.971	ENSMLUG00000011078	SART1	95	35.244	Myotis_lucifugus
ENSCSAVG00000009337	-	87	37.955	ENSNGAG00000004727	Sart1	95	35.450	Nannospalax_galili
ENSCSAVG00000009337	-	87	36.880	ENSNLEG00000005961	SART1	62	69.697	Nomascus_leucogenys
ENSCSAVG00000009337	-	87	33.965	ENSMEUG00000004918	SART1	78	37.768	Notamacropus_eugenii
ENSCSAVG00000009337	-	99	36.029	ENSODEG00000017777	SART1	95	34.634	Octodon_degus
ENSCSAVG00000009337	-	99	39.130	ENSONIG00000021283	SART1	98	36.706	Oreochromis_niloticus
ENSCSAVG00000009337	-	99	36.239	ENSORLG00000028400	SART1	97	36.504	Oryzias_latipes
ENSCSAVG00000009337	-	99	37.438	ENSORLG00020014721	SART1	97	36.632	Oryzias_latipes_hni
ENSCSAVG00000009337	-	99	35.688	ENSORLG00015014467	SART1	97	35.678	Oryzias_latipes_hsok
ENSCSAVG00000009337	-	99	36.488	ENSOMEG00000002508	SART1	97	36.598	Oryzias_melastigma
ENSCSAVG00000009337	-	95	35.799	ENSOARG00000000694	SART1	98	36.990	Ovis_aries
ENSCSAVG00000009337	-	93	37.209	ENSPPAG00000030167	SART1	83	69.697	Pan_paniscus
ENSCSAVG00000009337	-	86	41.176	ENSPPRG00000015794	SART1	94	35.018	Panthera_pardus
ENSCSAVG00000009337	-	78	32.550	ENSPTIG00000017833	SART1	97	32.057	Panthera_tigris_altaica
ENSCSAVG00000009337	-	93	37.209	ENSPTRG00000003905	SART1	83	69.697	Pan_troglodytes
ENSCSAVG00000009337	-	98	36.693	ENSPANG00000023502	SART1	80	69.697	Papio_anubis
ENSCSAVG00000009337	-	93	37.062	ENSPSIG00000002712	SART1	86	38.248	Pelodiscus_sinensis
ENSCSAVG00000009337	-	95	37.067	ENSPEMG00000012166	Sart1	92	36.667	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009337	-	98	36.115	ENSPCIG00000008311	SART1	94	34.994	Phascolarctos_cinereus
ENSCSAVG00000009337	-	99	36.591	ENSPFOG00000019883	SART1	97	36.856	Poecilia_formosa
ENSCSAVG00000009337	-	99	37.143	ENSPLAG00000019633	SART1	97	36.815	Poecilia_latipinna
ENSCSAVG00000009337	-	99	36.591	ENSPMEG00000013621	SART1	97	36.943	Poecilia_mexicana
ENSCSAVG00000009337	-	99	37.032	ENSPREG00000000100	SART1	96	37.082	Poecilia_reticulata
ENSCSAVG00000009337	-	84	39.084	ENSPVAG00000016969	SART1	90	33.163	Pteropus_vampyrus
ENSCSAVG00000009337	-	99	39.130	ENSPNYG00000014765	SART1	98	36.706	Pundamilia_nyererei
ENSCSAVG00000009337	-	99	35.627	ENSRNOG00000020475	Sart1	94	35.294	Rattus_norvegicus
ENSCSAVG00000009337	-	98	36.563	ENSRBIG00000044079	SART1	82	69.697	Rhinopithecus_bieti
ENSCSAVG00000009337	-	98	36.563	ENSRROG00000045251	SART1	82	69.697	Rhinopithecus_roxellana
ENSCSAVG00000009337	-	93	37.466	ENSSBOG00000023102	SART1	88	69.697	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009337	-	93	37.263	ENSSHAG00000011437	SART1	94	35.406	Sarcophilus_harrisii
ENSCSAVG00000009337	-	87	35.328	ENSSFOG00015018792	SART1	98	33.377	Scleropages_formosus
ENSCSAVG00000009337	-	99	36.522	ENSSMAG00000001043	SART1	96	35.914	Scophthalmus_maximus
ENSCSAVG00000009337	-	93	38.095	ENSSDUG00000019131	SART1	99	38.482	Seriola_dumerili
ENSCSAVG00000009337	-	99	38.625	ENSSLDG00000024307	SART1	96	37.772	Seriola_lalandi_dorsalis
ENSCSAVG00000009337	-	99	35.907	ENSSPUG00000009399	SART1	95	35.938	Sphenodon_punctatus
ENSCSAVG00000009337	-	99	37.625	ENSSPAG00000013156	SART1	96	37.018	Stegastes_partitus
ENSCSAVG00000009337	-	88	40.934	ENSSSCG00000012963	SART1	89	35.533	Sus_scrofa
ENSCSAVG00000009337	-	99	37.129	ENSTRUG00000025047	SART1	97	36.148	Takifugu_rubripes
ENSCSAVG00000009337	-	69	30.906	ENSTBEG00000010370	-	97	30.018	Tupaia_belangeri
ENSCSAVG00000009337	-	82	35.030	ENSTBEG00000002397	-	85	34.581	Tupaia_belangeri
ENSCSAVG00000009337	-	99	33.622	ENSTTRG00000008751	SART1	94	33.293	Tursiops_truncatus
ENSCSAVG00000009337	-	79	37.072	ENSUAMG00000020770	SART1	94	34.504	Ursus_americanus
ENSCSAVG00000009337	-	64	45.274	ENSUMAG00000010903	SART1	88	37.586	Ursus_maritimus
ENSCSAVG00000009337	-	85	38.796	ENSVVUG00000027041	SART1	94	35.109	Vulpes_vulpes
ENSCSAVG00000009337	-	86	41.566	ENSXETG00000011429	sart1	97	36.835	Xenopus_tropicalis
ENSCSAVG00000009337	-	99	37.361	ENSXCOG00000005296	SART1	98	36.829	Xiphophorus_couchianus