EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009360 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3343 bases
Position: chrreftig_27:839585-842927
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015911	RNase_PH	PF01138.21	2.4e-25	1	1
ENSCSAVP00000015911	RNase_PH_C	PF03725.15	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016090	-	1067	-	ENSCSAVP00000015911	290 (aa)	-	H2ZE95

Gene Model

Click here to download ENSCSAVG00000009360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009360's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009360	-	100	54.138	ENSG00000075914	EXOSC7	99	54.138	Homo_sapiens
ENSCSAVG00000009360	-	100	52.414	ENSAPOG00000023524	exosc7	99	52.414	Acanthochromis_polyacanthus
ENSCSAVG00000009360	-	80	30.342	ENSAPOG00000001202	exosc9	53	30.342	Acanthochromis_polyacanthus
ENSCSAVG00000009360	-	100	52.759	ENSAMEG00000012111	EXOSC7	99	52.759	Ailuropoda_melanoleuca
ENSCSAVG00000009360	-	78	50.667	ENSACIG00000007168	exosc7	99	50.667	Amphilophus_citrinellus
ENSCSAVG00000009360	-	89	52.918	ENSAOCG00000015133	exosc7	94	52.918	Amphiprion_ocellaris
ENSCSAVG00000009360	-	100	51.724	ENSAPEG00000009704	exosc7	99	51.724	Amphiprion_percula
ENSCSAVG00000009360	-	100	52.069	ENSATEG00000008157	exosc7	99	52.069	Anabas_testudineus
ENSCSAVG00000009360	-	80	30.769	ENSATEG00000023032	exosc9	53	30.769	Anabas_testudineus
ENSCSAVG00000009360	-	74	51.613	ENSAPLG00000012218	EXOSC7	99	51.613	Anas_platyrhynchos
ENSCSAVG00000009360	-	52	55.333	ENSACAG00000023898	-	99	55.333	Anolis_carolinensis
ENSCSAVG00000009360	-	100	53.793	ENSANAG00000028607	EXOSC7	99	53.793	Aotus_nancymaae
ENSCSAVG00000009360	-	100	53.103	ENSACLG00000007428	exosc7	99	53.103	Astatotilapia_calliptera
ENSCSAVG00000009360	-	91	52.830	ENSAMXG00000035439	exosc7	90	52.830	Astyanax_mexicanus
ENSCSAVG00000009360	-	100	54.483	ENSBTAG00000018329	EXOSC7	99	54.483	Bos_taurus
ENSCSAVG00000009360	-	95	34.853	WBGene00009289	exos-7	96	34.853	Caenorhabditis_elegans
ENSCSAVG00000009360	-	100	53.103	ENSCJAG00000001928	EXOSC7	99	53.103	Callithrix_jacchus
ENSCSAVG00000009360	-	100	53.793	ENSCAFG00000014055	EXOSC7	99	53.793	Canis_familiaris
ENSCSAVG00000009360	-	100	53.793	ENSCAFG00020013315	EXOSC7	99	53.793	Canis_lupus_dingo
ENSCSAVG00000009360	-	100	54.483	ENSCHIG00000012995	EXOSC7	99	54.483	Capra_hircus
ENSCSAVG00000009360	-	100	54.483	ENSTSYG00000012043	EXOSC7	99	54.483	Carlito_syrichta
ENSCSAVG00000009360	-	95	53.818	ENSCAPG00000016467	EXOSC7	95	53.818	Cavia_aperea
ENSCSAVG00000009360	-	100	53.793	ENSCPOG00000004937	EXOSC7	99	53.793	Cavia_porcellus
ENSCSAVG00000009360	-	100	53.448	ENSCCAG00000028936	EXOSC7	99	53.448	Cebus_capucinus
ENSCSAVG00000009360	-	100	54.828	ENSCATG00000036675	EXOSC7	99	54.828	Cercocebus_atys
ENSCSAVG00000009360	-	100	54.138	ENSCLAG00000015083	EXOSC7	99	54.138	Chinchilla_lanigera
ENSCSAVG00000009360	-	100	54.828	ENSCSAG00000016390	EXOSC7	99	54.828	Chlorocebus_sabaeus
ENSCSAVG00000009360	-	100	47.241	ENSCHOG00000001353	EXOSC7	99	47.241	Choloepus_hoffmanni
ENSCSAVG00000009360	-	100	55.862	ENSCPBG00000023202	EXOSC7	99	55.862	Chrysemys_picta_bellii
ENSCSAVG00000009360	-	100	85.862	ENSCING00000004774	-	100	85.862	Ciona_intestinalis
ENSCSAVG00000009360	-	100	55.172	ENSCANG00000041919	EXOSC7	99	55.172	Colobus_angolensis_palliatus
ENSCSAVG00000009360	-	100	54.138	ENSCGRG00001000938	Exosc7	99	54.138	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009360	-	93	54.244	ENSCGRG00000006887	Exosc7	99	54.244	Cricetulus_griseus_crigri
ENSCSAVG00000009360	-	100	51.724	ENSCSEG00000011080	exosc7	99	51.724	Cynoglossus_semilaevis
ENSCSAVG00000009360	-	80	30.213	ENSCVAG00000010277	exosc8	93	30.213	Cyprinodon_variegatus
ENSCSAVG00000009360	-	100	52.414	ENSCVAG00000000739	exosc7	99	52.414	Cyprinodon_variegatus
ENSCSAVG00000009360	-	100	51.724	ENSDARG00000100060	exosc7	99	51.724	Danio_rerio
ENSCSAVG00000009360	-	100	54.138	ENSDNOG00000007964	EXOSC7	99	54.138	Dasypus_novemcinctus
ENSCSAVG00000009360	-	92	53.383	ENSDORG00000024905	Exosc7	99	53.383	Dipodomys_ordii
ENSCSAVG00000009360	-	96	43.060	FBgn0034065	Rrp42	95	44.128	Drosophila_melanogaster
ENSCSAVG00000009360	-	93	44.649	ENSETEG00000000374	EXOSC7	99	44.649	Echinops_telfairi
ENSCSAVG00000009360	-	78	43.111	ENSEBUG00000001206	exosc7	99	44.059	Eptatretus_burgeri
ENSCSAVG00000009360	-	100	53.448	ENSEASG00005008039	EXOSC7	99	53.448	Equus_asinus_asinus
ENSCSAVG00000009360	-	100	53.793	ENSECAG00000006539	EXOSC7	99	53.793	Equus_caballus
ENSCSAVG00000009360	-	100	36.897	ENSEEUG00000014205	EXOSC7	99	36.897	Erinaceus_europaeus
ENSCSAVG00000009360	-	100	52.414	ENSELUG00000007128	exosc7	99	52.414	Esox_lucius
ENSCSAVG00000009360	-	100	53.793	ENSFCAG00000013344	EXOSC7	99	53.793	Felis_catus
ENSCSAVG00000009360	-	100	52.414	ENSFALG00000002600	EXOSC7	99	52.414	Ficedula_albicollis
ENSCSAVG00000009360	-	100	53.103	ENSFDAG00000012581	EXOSC7	99	53.103	Fukomys_damarensis
ENSCSAVG00000009360	-	100	52.414	ENSFHEG00000009565	exosc7	99	52.414	Fundulus_heteroclitus
ENSCSAVG00000009360	-	100	52.069	ENSGMOG00000007935	exosc7	99	52.069	Gadus_morhua
ENSCSAVG00000009360	-	78	30.568	ENSGMOG00000014066	exosc9	59	30.568	Gadus_morhua
ENSCSAVG00000009360	-	100	54.138	ENSGALG00000030084	EXOSC7	99	54.138	Gallus_gallus
ENSCSAVG00000009360	-	100	52.759	ENSGAFG00000003112	exosc7	99	52.759	Gambusia_affinis
ENSCSAVG00000009360	-	100	51.724	ENSGACG00000003085	exosc7	99	51.724	Gasterosteus_aculeatus
ENSCSAVG00000009360	-	89	30.385	ENSGACG00000020564	exosc8	91	30.385	Gasterosteus_aculeatus
ENSCSAVG00000009360	-	100	55.517	ENSGAGG00000004111	EXOSC7	90	55.517	Gopherus_agassizii
ENSCSAVG00000009360	-	100	54.483	ENSGGOG00000013497	EXOSC7	99	54.483	Gorilla_gorilla
ENSCSAVG00000009360	-	100	53.103	ENSHBUG00000009582	exosc7	99	53.103	Haplochromis_burtoni
ENSCSAVG00000009360	-	100	53.103	ENSHGLG00000012984	EXOSC7	99	53.103	Heterocephalus_glaber_female
ENSCSAVG00000009360	-	94	53.309	ENSHGLG00100005220	EXOSC7	93	53.309	Heterocephalus_glaber_male
ENSCSAVG00000009360	-	100	52.414	ENSHCOG00000007761	exosc7	99	52.414	Hippocampus_comes
ENSCSAVG00000009360	-	80	30.769	ENSHCOG00000013001	exosc9	53	30.769	Hippocampus_comes
ENSCSAVG00000009360	-	100	51.379	ENSIPUG00000012381	exosc7	99	51.379	Ictalurus_punctatus
ENSCSAVG00000009360	-	100	54.138	ENSSTOG00000005892	EXOSC7	99	54.138	Ictidomys_tridecemlineatus
ENSCSAVG00000009360	-	100	53.103	ENSJJAG00000010398	Exosc7	99	53.103	Jaculus_jaculus
ENSCSAVG00000009360	-	100	52.414	ENSKMAG00000012799	exosc7	99	52.414	Kryptolebias_marmoratus
ENSCSAVG00000009360	-	100	52.414	ENSLBEG00000027540	exosc7	99	52.414	Labrus_bergylta
ENSCSAVG00000009360	-	100	54.138	ENSLACG00000012065	EXOSC7	99	54.138	Latimeria_chalumnae
ENSCSAVG00000009360	-	100	52.069	ENSLOCG00000002116	exosc7	99	52.069	Lepisosteus_oculatus
ENSCSAVG00000009360	-	100	54.138	ENSLAFG00000012738	EXOSC7	99	54.138	Loxodonta_africana
ENSCSAVG00000009360	-	100	54.828	ENSMFAG00000038326	EXOSC7	99	54.828	Macaca_fascicularis
ENSCSAVG00000009360	-	100	54.828	ENSMMUG00000019130	EXOSC7	99	54.828	Macaca_mulatta
ENSCSAVG00000009360	-	100	54.828	ENSMNEG00000041567	EXOSC7	99	54.828	Macaca_nemestrina
ENSCSAVG00000009360	-	100	54.828	ENSMLEG00000039510	EXOSC7	99	54.828	Mandrillus_leucophaeus
ENSCSAVG00000009360	-	100	52.069	ENSMAMG00000002527	exosc7	99	52.069	Mastacembelus_armatus
ENSCSAVG00000009360	-	100	53.103	ENSMZEG00005026454	exosc7	99	53.103	Maylandia_zebra
ENSCSAVG00000009360	-	100	54.828	ENSMGAG00000011656	EXOSC7	99	54.828	Meleagris_gallopavo
ENSCSAVG00000009360	-	100	54.138	ENSMAUG00000016964	Exosc7	99	54.138	Mesocricetus_auratus
ENSCSAVG00000009360	-	100	55.172	ENSMICG00000049103	EXOSC7	99	55.172	Microcebus_murinus
ENSCSAVG00000009360	-	100	54.138	ENSMOCG00000014605	Exosc7	99	54.138	Microtus_ochrogaster
ENSCSAVG00000009360	-	100	53.448	ENSMMOG00000014984	exosc7	99	53.448	Mola_mola
ENSCSAVG00000009360	-	100	55.172	ENSMODG00000011261	EXOSC7	99	55.172	Monodelphis_domestica
ENSCSAVG00000009360	-	100	52.069	ENSMALG00000009471	exosc7	99	52.069	Monopterus_albus
ENSCSAVG00000009360	-	100	53.793	MGP_CAROLIEiJ_G0032854	Exosc7	99	53.793	Mus_caroli
ENSCSAVG00000009360	-	100	53.793	ENSMUSG00000025785	Exosc7	99	53.793	Mus_musculus
ENSCSAVG00000009360	-	100	53.793	MGP_PahariEiJ_G0015720	Exosc7	99	53.793	Mus_pahari
ENSCSAVG00000009360	-	100	53.793	MGP_SPRETEiJ_G0034002	Exosc7	99	53.793	Mus_spretus
ENSCSAVG00000009360	-	100	52.759	ENSMPUG00000015336	EXOSC7	90	52.759	Mustela_putorius_furo
ENSCSAVG00000009360	-	100	50.000	ENSMLUG00000014256	EXOSC7	99	50.000	Myotis_lucifugus
ENSCSAVG00000009360	-	100	54.138	ENSNGAG00000018736	Exosc7	99	54.138	Nannospalax_galili
ENSCSAVG00000009360	-	100	53.103	ENSNBRG00000018223	exosc7	99	53.103	Neolamprologus_brichardi
ENSCSAVG00000009360	-	78	51.111	ENSNBRG00000000047	EXOSC7	99	51.111	Neolamprologus_brichardi
ENSCSAVG00000009360	-	100	54.828	ENSNLEG00000006027	EXOSC7	99	54.828	Nomascus_leucogenys
ENSCSAVG00000009360	-	93	53.875	ENSMEUG00000013026	EXOSC7	99	53.875	Notamacropus_eugenii
ENSCSAVG00000009360	-	82	51.477	ENSOPRG00000016637	EXOSC7	99	51.477	Ochotona_princeps
ENSCSAVG00000009360	-	53	31.410	ENSODEG00000017401	-	59	31.410	Octodon_degus
ENSCSAVG00000009360	-	100	53.448	ENSODEG00000011518	EXOSC7	99	53.448	Octodon_degus
ENSCSAVG00000009360	-	88	30.000	ENSONIG00000012607	exosc8	91	30.000	Oreochromis_niloticus
ENSCSAVG00000009360	-	100	53.448	ENSONIG00000019664	exosc7	99	53.448	Oreochromis_niloticus
ENSCSAVG00000009360	-	92	55.597	ENSOANG00000006807	EXOSC7	97	55.597	Ornithorhynchus_anatinus
ENSCSAVG00000009360	-	100	53.793	ENSOCUG00000000939	EXOSC7	99	53.793	Oryctolagus_cuniculus
ENSCSAVG00000009360	-	100	53.793	ENSORLG00000002251	exosc7	99	53.793	Oryzias_latipes
ENSCSAVG00000009360	-	80	30.769	ENSORLG00000001989	exosc9	53	30.769	Oryzias_latipes
ENSCSAVG00000009360	-	80	30.769	ENSORLG00020014069	exosc9	53	30.769	Oryzias_latipes_hni
ENSCSAVG00000009360	-	89	30.268	ENSORLG00020013129	exosc8	96	30.268	Oryzias_latipes_hni
ENSCSAVG00000009360	-	100	53.448	ENSORLG00020008788	exosc7	99	53.448	Oryzias_latipes_hni
ENSCSAVG00000009360	-	81	30.544	ENSORLG00015019052	exosc8	93	30.544	Oryzias_latipes_hsok
ENSCSAVG00000009360	-	80	30.342	ENSORLG00015013630	exosc9	53	30.342	Oryzias_latipes_hsok
ENSCSAVG00000009360	-	100	53.448	ENSORLG00015015968	exosc7	99	53.448	Oryzias_latipes_hsok
ENSCSAVG00000009360	-	100	52.759	ENSOMEG00000007979	exosc7	99	52.759	Oryzias_melastigma
ENSCSAVG00000009360	-	100	55.172	ENSOGAG00000001011	EXOSC7	99	55.172	Otolemur_garnettii
ENSCSAVG00000009360	-	100	54.483	ENSOARG00000011298	EXOSC7	99	54.483	Ovis_aries
ENSCSAVG00000009360	-	100	54.138	ENSPPAG00000043557	EXOSC7	99	54.138	Pan_paniscus
ENSCSAVG00000009360	-	100	53.448	ENSPPRG00000006919	EXOSC7	99	53.448	Panthera_pardus
ENSCSAVG00000009360	-	93	53.506	ENSPTIG00000013985	EXOSC7	93	53.506	Panthera_tigris_altaica
ENSCSAVG00000009360	-	100	54.138	ENSPTRG00000014830	EXOSC7	99	54.138	Pan_troglodytes
ENSCSAVG00000009360	-	100	54.828	ENSPANG00000012918	EXOSC7	99	54.828	Papio_anubis
ENSCSAVG00000009360	-	100	52.759	ENSPKIG00000014229	exosc7	99	52.759	Paramormyrops_kingsleyae
ENSCSAVG00000009360	-	93	55.351	ENSPSIG00000010902	EXOSC7	99	55.351	Pelodiscus_sinensis
ENSCSAVG00000009360	-	100	51.379	ENSPMGG00000023830	exosc7	99	51.379	Periophthalmus_magnuspinnatus
ENSCSAVG00000009360	-	76	31.222	ENSPMGG00000019387	exosc9	93	31.222	Periophthalmus_magnuspinnatus
ENSCSAVG00000009360	-	100	53.793	ENSPEMG00000022845	Exosc7	99	53.793	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009360	-	99	52.740	ENSPMAG00000009427	exosc7	99	52.740	Petromyzon_marinus
ENSCSAVG00000009360	-	100	53.793	ENSPCIG00000025150	EXOSC7	99	53.793	Phascolarctos_cinereus
ENSCSAVG00000009360	-	100	52.759	ENSPFOG00000005301	exosc7	99	52.759	Poecilia_formosa
ENSCSAVG00000009360	-	100	47.586	ENSPLAG00000016410	exosc7	99	47.586	Poecilia_latipinna
ENSCSAVG00000009360	-	100	52.069	ENSPMEG00000019419	exosc7	99	52.069	Poecilia_mexicana
ENSCSAVG00000009360	-	67	55.952	ENSPREG00000017921	exosc7	92	55.952	Poecilia_reticulata
ENSCSAVG00000009360	-	100	54.138	ENSPPYG00000013949	-	99	54.138	Pongo_abelii
ENSCSAVG00000009360	-	100	53.448	ENSPCAG00000001772	EXOSC7	99	53.448	Procavia_capensis
ENSCSAVG00000009360	-	93	55.351	ENSPCOG00000024892	EXOSC7	99	55.351	Propithecus_coquereli
ENSCSAVG00000009360	-	100	53.793	ENSPVAG00000012445	EXOSC7	99	53.793	Pteropus_vampyrus
ENSCSAVG00000009360	-	100	53.103	ENSPNYG00000016020	exosc7	99	53.103	Pundamilia_nyererei
ENSCSAVG00000009360	-	100	50.345	ENSPNAG00000015645	exosc7	99	50.345	Pygocentrus_nattereri
ENSCSAVG00000009360	-	100	53.793	ENSRNOG00000060337	Exosc7	99	53.793	Rattus_norvegicus
ENSCSAVG00000009360	-	100	54.828	ENSRBIG00000040862	EXOSC7	99	54.828	Rhinopithecus_bieti
ENSCSAVG00000009360	-	100	54.828	ENSRROG00000038150	EXOSC7	99	54.828	Rhinopithecus_roxellana
ENSCSAVG00000009360	-	100	53.793	ENSSBOG00000032667	EXOSC7	99	53.793	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009360	-	98	52.595	ENSSHAG00000003370	EXOSC7	98	52.595	Sarcophilus_harrisii
ENSCSAVG00000009360	-	100	52.069	ENSSFOG00015022389	exosc7	99	52.069	Scleropages_formosus
ENSCSAVG00000009360	-	100	52.069	ENSSMAG00000020361	exosc7	99	52.069	Scophthalmus_maximus
ENSCSAVG00000009360	-	100	53.448	ENSSDUG00000019570	exosc7	99	53.448	Seriola_dumerili
ENSCSAVG00000009360	-	73	30.374	ENSSDUG00000002313	exosc9	50	30.374	Seriola_dumerili
ENSCSAVG00000009360	-	100	53.103	ENSSLDG00000024102	exosc7	99	53.103	Seriola_lalandi_dorsalis
ENSCSAVG00000009360	-	97	47.518	ENSSARG00000005380	EXOSC7	99	47.518	Sorex_araneus
ENSCSAVG00000009360	-	100	55.172	ENSSPUG00000011166	EXOSC7	99	55.172	Sphenodon_punctatus
ENSCSAVG00000009360	-	100	52.069	ENSSPAG00000004284	exosc7	99	52.069	Stegastes_partitus
ENSCSAVG00000009360	-	100	55.517	ENSSSCG00000011300	EXOSC7	99	55.517	Sus_scrofa
ENSCSAVG00000009360	-	98	53.333	ENSTGUG00000004961	EXOSC7	99	53.333	Taeniopygia_guttata
ENSCSAVG00000009360	-	100	53.103	ENSTRUG00000008320	exosc7	99	53.103	Takifugu_rubripes
ENSCSAVG00000009360	-	80	30.342	ENSTRUG00000004119	exosc9	56	30.342	Takifugu_rubripes
ENSCSAVG00000009360	-	100	53.103	ENSTNIG00000003617	exosc7	99	53.103	Tetraodon_nigroviridis
ENSCSAVG00000009360	-	80	30.342	ENSTNIG00000004601	exosc9	57	30.342	Tetraodon_nigroviridis
ENSCSAVG00000009360	-	100	53.448	ENSTTRG00000007189	EXOSC7	99	53.448	Tursiops_truncatus
ENSCSAVG00000009360	-	100	50.345	ENSUAMG00000004308	EXOSC7	98	51.477	Ursus_americanus
ENSCSAVG00000009360	-	94	53.114	ENSUMAG00000005714	EXOSC7	96	53.114	Ursus_maritimus
ENSCSAVG00000009360	-	92	47.761	ENSVPAG00000004346	EXOSC7	99	47.761	Vicugna_pacos
ENSCSAVG00000009360	-	53	33.974	ENSVPAG00000007287	EXOSC8	56	33.974	Vicugna_pacos
ENSCSAVG00000009360	-	100	53.793	ENSVVUG00000007036	EXOSC7	99	53.793	Vulpes_vulpes
ENSCSAVG00000009360	-	100	53.103	ENSXETG00000020144	exosc7	99	53.103	Xenopus_tropicalis
ENSCSAVG00000009360	-	78	50.667	ENSXCOG00000019573	exosc7	99	50.667	Xiphophorus_couchianus
ENSCSAVG00000009360	-	100	52.759	ENSXMAG00000014296	exosc7	99	52.759	Xiphophorus_maculatus