EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009380 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4679 bases
Position: chrreftig_11:1599778-1604456
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000015937	GTP_EFTU	PF00009.27	3.8e-54	1	1
ENSCSAVP00000015937	GTP_EFTU_D2	PF03144.25	1.2e-13	1	1
ENSCSAVP00000015937	GTP_EFTU_D3	PF03143.17	2.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016116	-	1613	-	ENSCSAVP00000015937	458 (aa)	-	H2ZEC1

Gene Model

Click here to download ENSCSAVG00000009380's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009380's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009380	-	86	30.805	ENSCSAVG00000001085	-	89	30.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009380	-	86	57.286	ENSG00000178952	TUFM	91	56.220	Homo_sapiens
ENSCSAVG00000009380	-	89	58.637	ENSAPOG00000013385	tufm	92	58.637	Acanthochromis_polyacanthus
ENSCSAVG00000009380	-	89	56.373	ENSAMEG00000015551	TUFM	90	56.373	Ailuropoda_melanoleuca
ENSCSAVG00000009380	-	92	56.613	ENSACIG00000007388	tufm	99	56.613	Amphilophus_citrinellus
ENSCSAVG00000009380	-	89	58.881	ENSAOCG00000001032	tufm	96	58.637	Amphiprion_ocellaris
ENSCSAVG00000009380	-	91	57.619	ENSAPEG00000015751	tufm	98	57.619	Amphiprion_percula
ENSCSAVG00000009380	-	86	58.500	ENSATEG00000002905	tufm	87	58.500	Anabas_testudineus
ENSCSAVG00000009380	-	88	56.790	ENSACAG00000005399	TUFM	88	56.931	Anolis_carolinensis
ENSCSAVG00000009380	-	87	56.110	ENSANAG00000022206	TUFM	88	56.110	Aotus_nancymaae
ENSCSAVG00000009380	-	90	58.373	ENSACLG00000007403	tufm	87	58.373	Astatotilapia_calliptera
ENSCSAVG00000009380	-	89	55.990	ENSBTAG00000019216	TUFM	90	55.990	Bos_taurus
ENSCSAVG00000009380	-	90	51.190	WBGene00007000	tufm-1	84	51.190	Caenorhabditis_elegans
ENSCSAVG00000009380	-	87	56.359	ENSCJAG00000006236	TUFM	88	56.359	Callithrix_jacchus
ENSCSAVG00000009380	-	89	55.882	ENSCAFG00000017216	TUFM	90	55.882	Canis_familiaris
ENSCSAVG00000009380	-	89	55.882	ENSCAFG00020017574	TUFM	90	55.882	Canis_lupus_dingo
ENSCSAVG00000009380	-	89	56.235	ENSCHIG00000020583	TUFM	90	56.235	Capra_hircus
ENSCSAVG00000009380	-	89	56.479	ENSTSYG00000026053	TUFM	90	56.479	Carlito_syrichta
ENSCSAVG00000009380	-	89	56.235	ENSCPOG00000010534	TUFM	90	56.235	Cavia_porcellus
ENSCSAVG00000009380	-	87	56.359	ENSCCAG00000033296	TUFM	88	56.359	Cebus_capucinus
ENSCSAVG00000009380	-	87	56.858	ENSCATG00000035822	TUFM	88	56.858	Cercocebus_atys
ENSCSAVG00000009380	-	87	57.000	ENSCLAG00000013969	TUFM	88	57.000	Chinchilla_lanigera
ENSCSAVG00000009380	-	88	56.436	ENSCSAG00000006314	TUFM	89	56.436	Chlorocebus_sabaeus
ENSCSAVG00000009380	-	89	56.968	ENSCHOG00000009077	TUFM	90	56.968	Choloepus_hoffmanni
ENSCSAVG00000009380	-	86	57.789	ENSCPBG00000003874	TUFM	87	57.789	Chrysemys_picta_bellii
ENSCSAVG00000009380	-	89	85.258	ENSCING00000002841	-	95	85.258	Ciona_intestinalis
ENSCSAVG00000009380	-	87	56.500	ENSCANG00000035829	TUFM	88	56.500	Colobus_angolensis_palliatus
ENSCSAVG00000009380	-	94	53.917	ENSCGRG00001022949	Tufm	92	55.048	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009380	-	87	39.259	ENSCGRG00000013193	-	90	37.772	Cricetulus_griseus_crigri
ENSCSAVG00000009380	-	94	53.917	ENSCGRG00000001868	-	92	55.048	Cricetulus_griseus_crigri
ENSCSAVG00000009380	-	91	58.432	ENSCSEG00000013841	tufm	98	56.770	Cynoglossus_semilaevis
ENSCSAVG00000009380	-	89	58.881	ENSCVAG00000006251	tufm	97	58.637	Cyprinodon_variegatus
ENSCSAVG00000009380	-	88	58.088	ENSDARG00000104173	tufm	91	58.088	Danio_rerio
ENSCSAVG00000009380	-	87	56.359	ENSDNOG00000047636	TUFM	88	56.359	Dasypus_novemcinctus
ENSCSAVG00000009380	-	81	49.598	ENSDORG00000023544	-	89	49.598	Dipodomys_ordii
ENSCSAVG00000009380	-	86	58.987	FBgn0024556	mEFTu1	81	58.987	Drosophila_melanogaster
ENSCSAVG00000009380	-	76	46.418	ENSETEG00000009601	TUFM	88	46.418	Echinops_telfairi
ENSCSAVG00000009380	-	94	54.273	ENSEBUG00000015907	tufm	69	54.273	Eptatretus_burgeri
ENSCSAVG00000009380	-	89	55.882	ENSEASG00005015477	TUFM	90	55.882	Equus_asinus_asinus
ENSCSAVG00000009380	-	89	55.882	ENSECAG00000019763	TUFM	90	55.882	Equus_caballus
ENSCSAVG00000009380	-	81	57.867	ENSEEUG00000001402	TUFM	93	57.867	Erinaceus_europaeus
ENSCSAVG00000009380	-	88	59.268	ENSELUG00000013410	tufm	88	59.268	Esox_lucius
ENSCSAVG00000009380	-	89	55.882	ENSFCAG00000003103	TUFM	59	55.882	Felis_catus
ENSCSAVG00000009380	-	79	54.372	ENSFDAG00000010881	TUFM	98	51.290	Fukomys_damarensis
ENSCSAVG00000009380	-	89	55.718	ENSFHEG00000020646	tufm	91	55.718	Fundulus_heteroclitus
ENSCSAVG00000009380	-	88	59.057	ENSGMOG00000014616	tufm	90	59.057	Gadus_morhua
ENSCSAVG00000009380	-	86	59.750	ENSGAFG00000004682	tufm	94	59.500	Gambusia_affinis
ENSCSAVG00000009380	-	88	58.537	ENSGACG00000012961	tufm	93	61.728	Gasterosteus_aculeatus
ENSCSAVG00000009380	-	86	58.543	ENSGAGG00000006132	TUFM	96	58.869	Gopherus_agassizii
ENSCSAVG00000009380	-	85	58.056	ENSGGOG00000014136	TUFM	86	58.056	Gorilla_gorilla
ENSCSAVG00000009380	-	89	59.367	ENSHBUG00000019031	tufm	89	59.367	Haplochromis_burtoni
ENSCSAVG00000009380	-	93	54.567	ENSHGLG00000006613	TUFM	94	54.567	Heterocephalus_glaber_female
ENSCSAVG00000009380	-	93	51.991	ENSHGLG00100004096	TUFM	93	51.991	Heterocephalus_glaber_male
ENSCSAVG00000009380	-	93	58.411	ENSHCOG00000014418	tufm	99	57.859	Hippocampus_comes
ENSCSAVG00000009380	-	86	59.500	ENSIPUG00000022457	tufm	90	59.500	Ictalurus_punctatus
ENSCSAVG00000009380	-	70	33.438	ENSIPUG00000020682	-	82	34.182	Ictalurus_punctatus
ENSCSAVG00000009380	-	90	56.145	ENSSTOG00000011837	TUFM	92	56.145	Ictidomys_tridecemlineatus
ENSCSAVG00000009380	-	94	54.839	ENSJJAG00000011840	Tufm	94	54.839	Jaculus_jaculus
ENSCSAVG00000009380	-	86	59.250	ENSKMAG00000009794	tufm	90	59.250	Kryptolebias_marmoratus
ENSCSAVG00000009380	-	87	57.921	ENSLBEG00000023735	tufm	96	57.213	Labrus_bergylta
ENSCSAVG00000009380	-	88	57.843	ENSLACG00000008242	TUFM	90	57.843	Latimeria_chalumnae
ENSCSAVG00000009380	-	89	54.768	ENSLAFG00000028911	TUFM	90	54.768	Loxodonta_africana
ENSCSAVG00000009380	-	87	56.858	ENSMFAG00000033739	TUFM	88	56.858	Macaca_fascicularis
ENSCSAVG00000009380	-	87	56.858	ENSMMUG00000003303	TUFM	88	56.858	Macaca_mulatta
ENSCSAVG00000009380	-	87	56.858	ENSMNEG00000006031	TUFM	88	56.858	Macaca_nemestrina
ENSCSAVG00000009380	-	87	56.858	ENSMLEG00000042133	TUFM	88	56.858	Mandrillus_leucophaeus
ENSCSAVG00000009380	-	86	59.750	ENSMAMG00000002053	tufm	90	59.750	Mastacembelus_armatus
ENSCSAVG00000009380	-	89	59.124	ENSMZEG00005010857	tufm	86	59.124	Maylandia_zebra
ENSCSAVG00000009380	-	94	54.608	ENSMAUG00000010490	Tufm	92	55.769	Mesocricetus_auratus
ENSCSAVG00000009380	-	88	56.436	ENSMICG00000007650	TUFM	89	56.858	Microcebus_murinus
ENSCSAVG00000009380	-	94	54.608	ENSMOCG00000010051	Tufm	94	54.608	Microtus_ochrogaster
ENSCSAVG00000009380	-	93	55.478	ENSMMOG00000012344	tufm	94	55.478	Mola_mola
ENSCSAVG00000009380	-	89	55.990	ENSMODG00000015564	TUFM	90	55.990	Monodelphis_domestica
ENSCSAVG00000009380	-	86	59.500	ENSMALG00000020254	tufm	90	59.500	Monopterus_albus
ENSCSAVG00000009380	-	90	56.068	MGP_CAROLIEiJ_G0030449	-	91	56.068	Mus_caroli
ENSCSAVG00000009380	-	90	56.068	MGP_CAROLIEiJ_G0030448	-	91	56.068	Mus_caroli
ENSCSAVG00000009380	-	89	56.235	ENSMUSG00000073838	Tufm	90	56.235	Mus_musculus
ENSCSAVG00000009380	-	89	56.235	MGP_PahariEiJ_G0013658	-	90	56.235	Mus_pahari
ENSCSAVG00000009380	-	89	56.235	MGP_PahariEiJ_G0013659	-	90	56.235	Mus_pahari
ENSCSAVG00000009380	-	89	56.479	MGP_SPRETEiJ_G0031562	-	90	56.479	Mus_spretus
ENSCSAVG00000009380	-	89	52.018	MGP_SPRETEiJ_G0031563	-	91	52.018	Mus_spretus
ENSCSAVG00000009380	-	78	54.318	ENSMPUG00000012816	TUFM	96	54.696	Mustela_putorius_furo
ENSCSAVG00000009380	-	89	55.990	ENSMLUG00000012335	-	90	55.990	Myotis_lucifugus
ENSCSAVG00000009380	-	93	55.399	ENSNGAG00000008610	Tufm	92	55.399	Nannospalax_galili
ENSCSAVG00000009380	-	78	57.821	ENSNBRG00000006466	tufm	95	57.821	Neolamprologus_brichardi
ENSCSAVG00000009380	-	87	54.478	ENSNLEG00000011063	TUFM	88	54.478	Nomascus_leucogenys
ENSCSAVG00000009380	-	73	59.347	ENSMEUG00000011131	TUFM	97	59.347	Notamacropus_eugenii
ENSCSAVG00000009380	-	90	46.635	ENSOPRG00000002318	-	91	46.635	Ochotona_princeps
ENSCSAVG00000009380	-	89	58.881	ENSONIG00000019389	tufm	92	58.881	Oreochromis_niloticus
ENSCSAVG00000009380	-	85	60.358	ENSOANG00000013114	TUFM	89	60.358	Ornithorhynchus_anatinus
ENSCSAVG00000009380	-	87	56.500	ENSOCUG00000002683	TUFM	88	56.500	Oryctolagus_cuniculus
ENSCSAVG00000009380	-	86	59.250	ENSORLG00000011497	tufm	90	59.250	Oryzias_latipes
ENSCSAVG00000009380	-	86	59.250	ENSORLG00020013437	tufm	90	59.250	Oryzias_latipes_hni
ENSCSAVG00000009380	-	86	59.500	ENSORLG00015003107	tufm	90	59.500	Oryzias_latipes_hsok
ENSCSAVG00000009380	-	86	59.250	ENSOMEG00000016958	tufm	90	59.250	Oryzias_melastigma
ENSCSAVG00000009380	-	87	57.750	ENSOGAG00000006875	TUFM	88	57.750	Otolemur_garnettii
ENSCSAVG00000009380	-	89	56.127	ENSOARG00000002357	TUFM	99	56.127	Ovis_aries
ENSCSAVG00000009380	-	86	57.286	ENSPPAG00000035168	TUFM	91	56.220	Pan_paniscus
ENSCSAVG00000009380	-	89	55.882	ENSPPRG00000014248	TUFM	90	55.882	Panthera_pardus
ENSCSAVG00000009380	-	89	55.882	ENSPTIG00000009980	TUFM	96	55.882	Panthera_tigris_altaica
ENSCSAVG00000009380	-	86	57.286	ENSPTRG00000007939	TUFM	91	56.220	Pan_troglodytes
ENSCSAVG00000009380	-	88	56.436	ENSPANG00000019624	TUFM	89	56.436	Papio_anubis
ENSCSAVG00000009380	-	85	60.969	ENSPKIG00000023809	tufm	86	60.969	Paramormyrops_kingsleyae
ENSCSAVG00000009380	-	67	52.733	ENSPSIG00000005302	TUFM	99	52.733	Pelodiscus_sinensis
ENSCSAVG00000009380	-	86	60.000	ENSPMGG00000015631	tufm	95	60.000	Periophthalmus_magnuspinnatus
ENSCSAVG00000009380	-	94	54.378	ENSPEMG00000012208	Tufm	94	54.378	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009380	-	93	54.524	ENSPCIG00000025208	TUFM	95	54.524	Phascolarctos_cinereus
ENSCSAVG00000009380	-	89	58.252	ENSPFOG00000007043	tufm	90	59.750	Poecilia_formosa
ENSCSAVG00000009380	-	86	59.250	ENSPLAG00000014372	tufm	90	59.250	Poecilia_latipinna
ENSCSAVG00000009380	-	86	59.750	ENSPMEG00000019508	tufm	90	59.750	Poecilia_mexicana
ENSCSAVG00000009380	-	86	59.750	ENSPMEG00000014520	-	92	59.750	Poecilia_mexicana
ENSCSAVG00000009380	-	86	59.500	ENSPREG00000013913	tufm	90	59.500	Poecilia_reticulata
ENSCSAVG00000009380	-	87	57.107	ENSPPYG00000007226	TUFM	88	57.107	Pongo_abelii
ENSCSAVG00000009380	-	89	52.195	ENSPCAG00000015294	TUFM	90	52.195	Procavia_capensis
ENSCSAVG00000009380	-	88	56.683	ENSPCOG00000012267	TUFM	89	56.683	Propithecus_coquereli
ENSCSAVG00000009380	-	89	58.881	ENSPNYG00000008905	tufm	93	58.881	Pundamilia_nyererei
ENSCSAVG00000009380	-	86	59.500	ENSPNAG00000018881	tufm	90	59.500	Pygocentrus_nattereri
ENSCSAVG00000009380	-	89	56.235	ENSRNOG00000018604	Tufm	90	56.235	Rattus_norvegicus
ENSCSAVG00000009380	-	55	52.778	ENSRBIG00000036713	-	92	52.778	Rhinopithecus_bieti
ENSCSAVG00000009380	-	86	54.887	ENSRBIG00000042008	-	89	54.887	Rhinopithecus_bieti
ENSCSAVG00000009380	-	87	56.608	ENSRROG00000036858	-	88	56.608	Rhinopithecus_roxellana
ENSCSAVG00000009380	-	58	57.993	ENSRROG00000044977	-	73	57.993	Rhinopithecus_roxellana
ENSCSAVG00000009380	-	84	54.569	YOR187W	TUF1	90	54.569	Saccharomyces_cerevisiae
ENSCSAVG00000009380	-	91	55.131	ENSSBOG00000026542	TUFM	92	55.131	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009380	-	87	58.000	ENSSHAG00000012121	TUFM	93	58.000	Sarcophilus_harrisii
ENSCSAVG00000009380	-	86	59.148	ENSSFOG00015013352	tufm	90	59.148	Scleropages_formosus
ENSCSAVG00000009380	-	90	58.134	ENSSMAG00000010053	tufm	93	58.134	Scophthalmus_maximus
ENSCSAVG00000009380	-	86	60.000	ENSSDUG00000016896	tufm	90	60.000	Seriola_dumerili
ENSCSAVG00000009380	-	86	59.750	ENSSLDG00000006494	tufm	90	59.750	Seriola_lalandi_dorsalis
ENSCSAVG00000009380	-	76	57.550	ENSSARG00000011228	TUFM	92	57.550	Sorex_araneus
ENSCSAVG00000009380	-	92	49.412	ENSSPUG00000016312	TUFM	96	49.412	Sphenodon_punctatus
ENSCSAVG00000009380	-	89	57.664	ENSSPAG00000009936	tufm	94	57.421	Stegastes_partitus
ENSCSAVG00000009380	-	89	56.235	ENSSSCG00000007803	TUFM	90	56.235	Sus_scrofa
ENSCSAVG00000009380	-	88	59.360	ENSTRUG00000008300	tufm	90	60.000	Takifugu_rubripes
ENSCSAVG00000009380	-	92	52.123	ENSTBEG00000015029	TUFM	94	51.389	Tupaia_belangeri
ENSCSAVG00000009380	-	55	54.545	ENSTTRG00000005930	-	56	54.545	Tursiops_truncatus
ENSCSAVG00000009380	-	59	58.759	ENSTTRG00000001980	-	99	58.759	Tursiops_truncatus
ENSCSAVG00000009380	-	94	54.503	ENSUAMG00000001471	TUFM	95	54.503	Ursus_americanus
ENSCSAVG00000009380	-	87	56.750	ENSUMAG00000009341	TUFM	98	56.750	Ursus_maritimus
ENSCSAVG00000009380	-	59	57.509	ENSVPAG00000009541	TUFM	99	57.509	Vicugna_pacos
ENSCSAVG00000009380	-	89	55.882	ENSVVUG00000024170	TUFM	90	55.882	Vulpes_vulpes
ENSCSAVG00000009380	-	86	60.000	ENSXMAG00000011848	tufm	92	60.000	Xiphophorus_maculatus