EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000009421 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
6329 bases
Position
chrreftig_15:1927758-1934086
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000016000zf-C2H2PF00096.263.9e-2214
ENSCSAVP00000016000zf-C2H2PF00096.263.9e-2224
ENSCSAVP00000016000zf-C2H2PF00096.263.9e-2234
ENSCSAVP00000016000zf-C2H2PF00096.263.9e-2244
ENSCSAVP00000015999zf-C2H2PF00096.263.7e-1814
ENSCSAVP00000015999zf-C2H2PF00096.263.7e-1824
ENSCSAVP00000015999zf-C2H2PF00096.263.7e-1834
ENSCSAVP00000015999zf-C2H2PF00096.263.7e-1844
ENSCSAVP00000016000zf-metPF12874.72.9e-1612
ENSCSAVP00000016000zf-metPF12874.72.9e-1622
ENSCSAVP00000015999zf-metPF12874.74.2e-1313
ENSCSAVP00000015999zf-metPF12874.74.2e-1323
ENSCSAVP00000015999zf-metPF12874.74.2e-1333
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000016179-2315-ENSCSAVP00000015999550 (aa)-H2ZEI3
ENSCSAVT00000016180-2598-ENSCSAVP00000016000702 (aa)-H2ZEI4
Gene Model
Click here to download ENSCSAVG00000009421's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009421's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000009421-6132.609ENSCSAVG00000004543-9032.609
ENSCSAVG00000009421-6033.129ENSCSAVG00000004703-9644.000
ENSCSAVG00000009421-5141.270ENSCSAVG00000009953-9441.270
ENSCSAVG00000009421-7242.000ENSCSAVG00000007589-9946.000
ENSCSAVG00000009421-7550.000ENSCSAVG00000001834-9450.000
ENSCSAVG00000009421-7443.860ENSCSAVG00000000293-9545.614
ENSCSAVG00000009421-7251.111ENSCSAVG00000006608-9952.273
ENSCSAVG00000009421-10036.662ENSCSAVG00000010662-6440.696
ENSCSAVG00000009421-5949.020ENSCSAVG00000006141-10046.000
ENSCSAVG00000009421-5244.000ENSCSAVG00000000642-9844.000
ENSCSAVG00000009421-5742.553ENSCSAVG00000001989-10040.741
ENSCSAVG00000009421-5132.990ENSCSAVG00000005896-6332.990
ENSCSAVG00000009421-5246.939ENSCSAVG00000009574-9746.939
ENSCSAVG00000009421-5545.652ENSCSAVG00000010960-9345.652
ENSCSAVG00000009421-7246.667ENSCSAVG00000008862-9942.857
ENSCSAVG00000009421-5550.000ENSCSAVG00000004678-8850.000
ENSCSAVG00000009421-5832.759ENSCSAVG00000006650-9551.020
ENSCSAVG00000009421-5444.000ENSCSAVG00000000673-9944.000
ENSCSAVG00000009421-5848.000ENSCSAVG00000000655-9648.000
ENSCSAVG00000009421-5550.000ENSCSAVG00000004499-9852.000
ENSCSAVG00000009421-5140.816ENSCSAVG00000000690-9140.816
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000009421-9472.982ENSCING00000005289-9772.982Ciona_intestinalis
ENSCSAVG00000009421-9936.753ENSCING00000003802-6042.049Ciona_intestinalis

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