EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009479 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3647 bases
Position: chrreftig_2:2695603-2699249
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016106	Spt4	PF06093.13	7.2e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016286	-	692	-	ENSCSAVP00000016106	122 (aa)	-	H2ZEU0

Gene Model

Click here to download ENSCSAVG00000009479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009479	-	94	72.174	ENSG00000213246	SUPT4H1	98	72.174	Homo_sapiens
ENSCSAVG00000009479	-	77	69.149	ENSAPOG00000006828	supt4h1	100	69.149	Acanthochromis_polyacanthus
ENSCSAVG00000009479	-	94	72.174	ENSAMEG00000011686	SUPT4H1	98	72.174	Ailuropoda_melanoleuca
ENSCSAVG00000009479	-	76	68.817	ENSACIG00000012162	supt4h1	99	68.817	Amphilophus_citrinellus
ENSCSAVG00000009479	-	95	69.828	ENSAOCG00000022349	supt4h1	99	69.828	Amphiprion_ocellaris
ENSCSAVG00000009479	-	95	69.828	ENSAPEG00000013170	supt4h1	99	69.828	Amphiprion_percula
ENSCSAVG00000009479	-	94	71.304	ENSATEG00000005317	supt4h1	98	71.304	Anabas_testudineus
ENSCSAVG00000009479	-	95	62.393	ENSAPLG00000012497	SUPT4H1	99	62.393	Anas_platyrhynchos
ENSCSAVG00000009479	-	95	72.414	ENSANAG00000026628	SUPT4H1	99	72.414	Aotus_nancymaae
ENSCSAVG00000009479	-	94	70.435	ENSACLG00000005475	supt4h1	98	70.435	Astatotilapia_calliptera
ENSCSAVG00000009479	-	94	69.565	ENSAMXG00000041272	supt4h1	98	69.565	Astyanax_mexicanus
ENSCSAVG00000009479	-	90	51.786	WBGene00005014	spt-4	93	51.786	Caenorhabditis_elegans
ENSCSAVG00000009479	-	94	72.174	ENSCJAG00000017369	SUPT4H1	98	72.174	Callithrix_jacchus
ENSCSAVG00000009479	-	94	72.174	ENSCAFG00000017524	SUPT4H1	98	72.174	Canis_familiaris
ENSCSAVG00000009479	-	94	72.174	ENSCAFG00020025803	SUPT4H1	77	72.174	Canis_lupus_dingo
ENSCSAVG00000009479	-	94	72.174	ENSCHIG00000026783	SUPT4H1	98	72.174	Capra_hircus
ENSCSAVG00000009479	-	94	72.174	ENSTSYG00000030004	SUPT4H1	98	72.174	Carlito_syrichta
ENSCSAVG00000009479	-	94	72.174	ENSCPOG00000031227	SUPT4H1	98	72.174	Cavia_porcellus
ENSCSAVG00000009479	-	94	72.174	ENSCCAG00000034799	SUPT4H1	98	72.174	Cebus_capucinus
ENSCSAVG00000009479	-	94	72.174	ENSCATG00000042435	SUPT4H1	98	72.174	Cercocebus_atys
ENSCSAVG00000009479	-	95	52.586	ENSCATG00000024314	-	99	52.586	Cercocebus_atys
ENSCSAVG00000009479	-	94	72.174	ENSCLAG00000011223	SUPT4H1	98	72.174	Chinchilla_lanigera
ENSCSAVG00000009479	-	94	72.174	ENSCSAG00000005761	SUPT4H1	98	72.174	Chlorocebus_sabaeus
ENSCSAVG00000009479	-	94	62.609	ENSCHOG00000000246	SUPT4H1	98	62.609	Choloepus_hoffmanni
ENSCSAVG00000009479	-	100	94.262	ENSCING00000019520	spt4	100	94.262	Ciona_intestinalis
ENSCSAVG00000009479	-	94	72.174	ENSCANG00000034430	SUPT4H1	98	72.174	Colobus_angolensis_palliatus
ENSCSAVG00000009479	-	94	71.304	ENSCGRG00001018056	Supt4a	98	71.304	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009479	-	94	71.304	ENSCGRG00000014047	Supt4a	98	71.304	Cricetulus_griseus_crigri
ENSCSAVG00000009479	-	95	68.966	ENSCSEG00000010897	supt4h1	99	68.966	Cynoglossus_semilaevis
ENSCSAVG00000009479	-	94	69.565	ENSCVAG00000014190	supt4h1	98	69.565	Cyprinodon_variegatus
ENSCSAVG00000009479	-	95	70.690	ENSDARG00000113969	supt4h1	99	70.690	Danio_rerio
ENSCSAVG00000009479	-	94	72.174	ENSDNOG00000032349	SUPT4H1	98	72.174	Dasypus_novemcinctus
ENSCSAVG00000009479	-	94	72.174	ENSDORG00000002826	-	98	72.174	Dipodomys_ordii
ENSCSAVG00000009479	-	89	62.281	ENSDORG00000030049	-	99	63.158	Dipodomys_ordii
ENSCSAVG00000009479	-	94	57.391	FBgn0028683	spt4	99	57.391	Drosophila_melanogaster
ENSCSAVG00000009479	-	62	69.737	ENSEBUG00000006884	supt4h1	100	69.737	Eptatretus_burgeri
ENSCSAVG00000009479	-	94	72.174	ENSEASG00005002787	SUPT4H1	78	72.174	Equus_asinus_asinus
ENSCSAVG00000009479	-	94	72.174	ENSECAG00000016585	SUPT4H1	98	72.174	Equus_caballus
ENSCSAVG00000009479	-	95	67.241	ENSELUG00000019831	supt4h1	99	67.241	Esox_lucius
ENSCSAVG00000009479	-	94	72.174	ENSFCAG00000018732	SUPT4H1	98	72.174	Felis_catus
ENSCSAVG00000009479	-	77	71.277	ENSFALG00000013757	SUPT4H1	100	71.277	Ficedula_albicollis
ENSCSAVG00000009479	-	95	71.552	ENSFDAG00000016718	SUPT4H1	99	71.552	Fukomys_damarensis
ENSCSAVG00000009479	-	94	70.435	ENSFHEG00000009114	supt4h1	98	70.435	Fundulus_heteroclitus
ENSCSAVG00000009479	-	95	69.828	ENSGMOG00000014619	supt4h1	99	69.828	Gadus_morhua
ENSCSAVG00000009479	-	94	73.043	ENSGALG00000000944	SUPT4H1	98	73.043	Gallus_gallus
ENSCSAVG00000009479	-	94	68.696	ENSGAFG00000014374	supt4h1	98	68.696	Gambusia_affinis
ENSCSAVG00000009479	-	95	71.552	ENSGACG00000020237	supt4h1	99	71.552	Gasterosteus_aculeatus
ENSCSAVG00000009479	-	54	74.242	ENSGAGG00000008561	SUPT4H1	56	74.242	Gopherus_agassizii
ENSCSAVG00000009479	-	94	72.174	ENSGGOG00000007232	SUPT4H1	98	72.174	Gorilla_gorilla
ENSCSAVG00000009479	-	76	69.892	ENSHBUG00000022528	supt4h1	99	69.892	Haplochromis_burtoni
ENSCSAVG00000009479	-	91	68.468	ENSHBUG00000000848	-	93	68.468	Haplochromis_burtoni
ENSCSAVG00000009479	-	95	71.552	ENSHGLG00000005007	SUPT4H1	99	71.552	Heterocephalus_glaber_female
ENSCSAVG00000009479	-	95	71.552	ENSHGLG00100018961	SUPT4H1	99	71.552	Heterocephalus_glaber_male
ENSCSAVG00000009479	-	95	68.103	ENSHCOG00000010739	supt4h1	99	68.103	Hippocampus_comes
ENSCSAVG00000009479	-	94	70.435	ENSIPUG00000012062	supt4h1	98	70.435	Ictalurus_punctatus
ENSCSAVG00000009479	-	94	59.664	ENSSTOG00000032338	SUPT4H1	98	59.664	Ictidomys_tridecemlineatus
ENSCSAVG00000009479	-	94	72.174	ENSJJAG00000010938	Supt4a	98	72.174	Jaculus_jaculus
ENSCSAVG00000009479	-	94	72.174	ENSKMAG00000013119	supt4h1	98	72.174	Kryptolebias_marmoratus
ENSCSAVG00000009479	-	95	68.966	ENSLBEG00000018308	supt4h1	99	68.966	Labrus_bergylta
ENSCSAVG00000009479	-	95	71.552	ENSLACG00000016364	SUPT4H1	99	71.552	Latimeria_chalumnae
ENSCSAVG00000009479	-	94	71.304	ENSLOCG00000002970	supt4h1	98	71.304	Lepisosteus_oculatus
ENSCSAVG00000009479	-	94	72.174	ENSLAFG00000020718	SUPT4H1	98	72.174	Loxodonta_africana
ENSCSAVG00000009479	-	94	72.174	ENSMFAG00000003856	SUPT4H1	98	72.174	Macaca_fascicularis
ENSCSAVG00000009479	-	95	54.310	ENSMFAG00000045087	-	99	54.310	Macaca_fascicularis
ENSCSAVG00000009479	-	94	72.174	ENSMMUG00000040655	SUPT4H1	98	72.174	Macaca_mulatta
ENSCSAVG00000009479	-	95	54.310	ENSMMUG00000049176	-	99	54.310	Macaca_mulatta
ENSCSAVG00000009479	-	94	51.304	ENSMNEG00000032891	-	98	51.304	Macaca_nemestrina
ENSCSAVG00000009479	-	95	54.310	ENSMNEG00000034957	-	99	54.310	Macaca_nemestrina
ENSCSAVG00000009479	-	94	72.174	ENSMNEG00000037471	SUPT4H1	98	72.174	Macaca_nemestrina
ENSCSAVG00000009479	-	95	50.000	ENSMLEG00000031477	-	99	50.000	Mandrillus_leucophaeus
ENSCSAVG00000009479	-	95	54.310	ENSMLEG00000040145	-	99	54.310	Mandrillus_leucophaeus
ENSCSAVG00000009479	-	94	72.174	ENSMLEG00000013750	SUPT4H1	98	72.174	Mandrillus_leucophaeus
ENSCSAVG00000009479	-	94	69.565	ENSMAMG00000006148	supt4h1	98	69.565	Mastacembelus_armatus
ENSCSAVG00000009479	-	94	70.435	ENSMZEG00005023783	supt4h1	98	70.435	Maylandia_zebra
ENSCSAVG00000009479	-	94	71.304	ENSMAUG00000013090	Supt4a	98	71.304	Mesocricetus_auratus
ENSCSAVG00000009479	-	94	72.174	ENSMICG00000043219	SUPT4H1	98	72.174	Microcebus_murinus
ENSCSAVG00000009479	-	94	71.304	ENSMOCG00000005545	Supt4a	98	71.304	Microtus_ochrogaster
ENSCSAVG00000009479	-	76	68.817	ENSMMOG00000005411	supt4h1	99	68.817	Mola_mola
ENSCSAVG00000009479	-	95	70.690	ENSMODG00000024938	-	99	70.690	Monodelphis_domestica
ENSCSAVG00000009479	-	94	66.087	ENSMODG00000024427	-	98	66.087	Monodelphis_domestica
ENSCSAVG00000009479	-	94	70.435	ENSMALG00000013156	supt4h1	98	70.435	Monopterus_albus
ENSCSAVG00000009479	-	94	72.174	ENSMUSG00000020485	Supt4a	98	72.174	Mus_musculus
ENSCSAVG00000009479	-	94	72.174	ENSMPUG00000015326	SUPT4H1	96	72.174	Mustela_putorius_furo
ENSCSAVG00000009479	-	94	66.957	ENSMLUG00000027172	-	98	66.957	Myotis_lucifugus
ENSCSAVG00000009479	-	94	66.087	ENSMLUG00000028057	-	98	66.087	Myotis_lucifugus
ENSCSAVG00000009479	-	94	68.696	ENSMLUG00000024867	-	98	68.696	Myotis_lucifugus
ENSCSAVG00000009479	-	94	72.174	ENSMLUG00000025583	-	98	72.174	Myotis_lucifugus
ENSCSAVG00000009479	-	94	72.174	ENSNGAG00000015537	-	98	72.174	Nannospalax_galili
ENSCSAVG00000009479	-	61	56.000	ENSNGAG00000014401	-	99	56.000	Nannospalax_galili
ENSCSAVG00000009479	-	94	70.435	ENSNBRG00000016146	supt4h1	98	70.435	Neolamprologus_brichardi
ENSCSAVG00000009479	-	93	51.327	ENSNLEG00000028366	-	79	51.327	Nomascus_leucogenys
ENSCSAVG00000009479	-	94	72.174	ENSNLEG00000008159	-	98	72.174	Nomascus_leucogenys
ENSCSAVG00000009479	-	89	62.037	ENSNLEG00000033851	-	98	62.037	Nomascus_leucogenys
ENSCSAVG00000009479	-	95	70.690	ENSMEUG00000010164	SUPT4H1	99	70.690	Notamacropus_eugenii
ENSCSAVG00000009479	-	94	46.087	ENSOPRG00000018779	-	98	46.087	Ochotona_princeps
ENSCSAVG00000009479	-	94	72.174	ENSODEG00000011183	SUPT4H1	98	72.174	Octodon_degus
ENSCSAVG00000009479	-	94	72.174	ENSOCUG00000025823	SUPT4H1	98	72.174	Oryctolagus_cuniculus
ENSCSAVG00000009479	-	95	69.828	ENSORLG00000011097	supt4h1	99	69.828	Oryzias_latipes
ENSCSAVG00000009479	-	95	69.828	ENSORLG00020018918	supt4h1	99	69.828	Oryzias_latipes_hni
ENSCSAVG00000009479	-	95	69.828	ENSORLG00015001908	supt4h1	99	69.828	Oryzias_latipes_hsok
ENSCSAVG00000009479	-	95	69.828	ENSOMEG00000009103	supt4h1	99	69.828	Oryzias_melastigma
ENSCSAVG00000009479	-	94	72.174	ENSOGAG00000031972	SUPT4H1	98	72.174	Otolemur_garnettii
ENSCSAVG00000009479	-	94	72.174	ENSOARG00000010021	SUPT4H1	98	72.174	Ovis_aries
ENSCSAVG00000009479	-	94	72.174	ENSPPRG00000010997	SUPT4H1	98	72.174	Panthera_pardus
ENSCSAVG00000009479	-	94	72.174	ENSPTIG00000006503	SUPT4H1	98	72.174	Panthera_tigris_altaica
ENSCSAVG00000009479	-	94	72.174	ENSPTRG00000009451	SUPT4H1	98	72.174	Pan_troglodytes
ENSCSAVG00000009479	-	95	52.586	ENSPANG00000031534	-	99	52.586	Papio_anubis
ENSCSAVG00000009479	-	94	72.174	ENSPANG00000022280	SUPT4H1	98	72.174	Papio_anubis
ENSCSAVG00000009479	-	95	60.345	ENSPKIG00000017008	supt4h1	99	60.345	Paramormyrops_kingsleyae
ENSCSAVG00000009479	-	80	70.103	ENSPSIG00000008272	SUPT4H1	99	70.103	Pelodiscus_sinensis
ENSCSAVG00000009479	-	80	67.010	ENSPMGG00000013558	supt4h1	100	67.010	Periophthalmus_magnuspinnatus
ENSCSAVG00000009479	-	94	71.304	ENSPEMG00000001651	Supt4a	98	71.304	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009479	-	73	62.921	ENSPCIG00000007509	-	78	62.921	Phascolarctos_cinereus
ENSCSAVG00000009479	-	95	70.690	ENSPCIG00000015610	-	99	70.690	Phascolarctos_cinereus
ENSCSAVG00000009479	-	94	68.696	ENSPFOG00000018406	supt4h1	98	68.696	Poecilia_formosa
ENSCSAVG00000009479	-	94	68.696	ENSPLAG00000012498	supt4h1	98	68.696	Poecilia_latipinna
ENSCSAVG00000009479	-	94	68.696	ENSPMEG00000011887	supt4h1	98	68.696	Poecilia_mexicana
ENSCSAVG00000009479	-	76	73.118	ENSPREG00000008031	supt4h1	76	65.625	Poecilia_reticulata
ENSCSAVG00000009479	-	94	72.174	ENSPPYG00000008233	SUPT4H1	98	72.174	Pongo_abelii
ENSCSAVG00000009479	-	94	72.174	ENSPCOG00000016589	SUPT4H1	98	72.174	Propithecus_coquereli
ENSCSAVG00000009479	-	94	72.174	ENSPVAG00000002320	SUPT4H1	98	72.174	Pteropus_vampyrus
ENSCSAVG00000009479	-	94	70.435	ENSPNYG00000016837	supt4h1	98	70.435	Pundamilia_nyererei
ENSCSAVG00000009479	-	76	69.892	ENSPNAG00000009422	supt4h1	99	69.892	Pygocentrus_nattereri
ENSCSAVG00000009479	-	94	72.174	ENSRNOG00000007845	Supt4h1	98	72.174	Rattus_norvegicus
ENSCSAVG00000009479	-	94	72.174	ENSRBIG00000043489	SUPT4H1	98	72.174	Rhinopithecus_bieti
ENSCSAVG00000009479	-	94	72.174	ENSRROG00000045659	SUPT4H1	98	72.174	Rhinopithecus_roxellana
ENSCSAVG00000009479	-	84	43.137	YGR063C	-	94	43.137	Saccharomyces_cerevisiae
ENSCSAVG00000009479	-	94	72.174	ENSSBOG00000031578	SUPT4H1	98	72.174	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009479	-	61	68.000	ENSSFOG00015001230	supt4h1	99	68.000	Scleropages_formosus
ENSCSAVG00000009479	-	94	70.435	ENSSMAG00000000422	supt4h1	98	70.435	Scophthalmus_maximus
ENSCSAVG00000009479	-	94	70.435	ENSSDUG00000017639	supt4h1	98	70.435	Seriola_dumerili
ENSCSAVG00000009479	-	94	70.435	ENSSLDG00000019831	supt4h1	98	70.435	Seriola_lalandi_dorsalis
ENSCSAVG00000009479	-	94	71.304	ENSSPUG00000001513	SUPT4H1	98	71.304	Sphenodon_punctatus
ENSCSAVG00000009479	-	94	70.435	ENSSPAG00000017849	supt4h1	98	70.435	Stegastes_partitus
ENSCSAVG00000009479	-	94	72.174	ENSSSCG00000034752	SUPT4H1	98	72.174	Sus_scrofa
ENSCSAVG00000009479	-	94	70.435	ENSTRUG00000021118	supt4h1	98	70.435	Takifugu_rubripes
ENSCSAVG00000009479	-	94	70.435	ENSTNIG00000008553	supt4h1	98	70.435	Tetraodon_nigroviridis
ENSCSAVG00000009479	-	94	72.174	ENSUAMG00000005160	SUPT4H1	98	72.174	Ursus_americanus
ENSCSAVG00000009479	-	94	72.174	ENSUMAG00000022805	SUPT4H1	98	72.174	Ursus_maritimus
ENSCSAVG00000009479	-	76	72.043	ENSVPAG00000009628	SUPT4H1	99	72.043	Vicugna_pacos
ENSCSAVG00000009479	-	94	72.174	ENSVVUG00000012505	SUPT4H1	98	72.174	Vulpes_vulpes
ENSCSAVG00000009479	-	95	58.974	ENSXETG00000025331	supt4h1	99	58.974	Xenopus_tropicalis
ENSCSAVG00000009479	-	76	67.742	ENSXCOG00000005652	supt4h1	99	67.742	Xiphophorus_couchianus
ENSCSAVG00000009479	-	94	68.696	ENSXMAG00000005633	supt4h1	98	68.696	Xiphophorus_maculatus