EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009503 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5957 bases
Position: chrreftig_58:1809291-1815247
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016155	GTP_EFTU	PF00009.27	3.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016336	-	937	-	ENSCSAVP00000016155	197 (aa)	-	H2ZEY9

Gene Model

Click here to download ENSCSAVG00000009503's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009503's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009503	-	97	30.244	ENSCSAVG00000011162	-	95	30.244
ENSCSAVG00000009503	-	87	34.884	ENSCSAVG00000009128	-	81	34.884
ENSCSAVG00000009503	-	83	31.928	ENSCSAVG00000008684	-	78	31.928
ENSCSAVG00000009503	-	93	30.890	ENSCSAVG00000000160	-	87	30.890
ENSCSAVG00000009503	-	97	34.286	ENSCSAVG00000002088	-	97	34.286
ENSCSAVG00000009503	-	98	30.769	ENSCSAVG00000000613	-	90	30.769
ENSCSAVG00000009503	-	97	32.353	ENSCSAVG00000009147	-	95	32.353
ENSCSAVG00000009503	-	78	33.548	ENSCSAVG00000008995	-	95	33.548
ENSCSAVG00000009503	-	98	38.500	ENSCSAVG00000005450	-	79	38.500
ENSCSAVG00000009503	-	80	33.962	ENSCSAVG00000001356	-	67	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009503	-	81	42.767	WBGene00004309	rap-3	76	42.767	Caenorhabditis_elegans