EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009527 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1698 bases
Position: chrreftig_58:1837843-1839540
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016204	RAI1	PF08652.11	3.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016385	-	1099	-	ENSCSAVP00000016204	358 (aa)	-	H2ZF38

Gene Model

Click here to download ENSCSAVG00000009527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009527	-	99	38.398	ENSG00000204348	DXO	86	38.674	Homo_sapiens
ENSCSAVG00000009527	-	99	40.437	ENSAPOG00000017890	DXO	80	40.437	Acanthochromis_polyacanthus
ENSCSAVG00000009527	-	99	37.845	ENSAMEG00000002151	DXO	85	37.845	Ailuropoda_melanoleuca
ENSCSAVG00000009527	-	99	40.710	ENSAOCG00000001719	DXO	80	40.710	Amphiprion_ocellaris
ENSCSAVG00000009527	-	99	40.710	ENSAPEG00000012237	DXO	80	40.710	Amphiprion_percula
ENSCSAVG00000009527	-	99	38.798	ENSATEG00000024423	DXO	78	38.798	Anabas_testudineus
ENSCSAVG00000009527	-	99	38.398	ENSACAG00000012071	DXO	83	38.398	Anolis_carolinensis
ENSCSAVG00000009527	-	99	38.950	ENSANAG00000020757	DXO	79	38.950	Aotus_nancymaae
ENSCSAVG00000009527	-	99	40.599	ENSACLG00000027873	DXO	80	40.599	Astatotilapia_calliptera
ENSCSAVG00000009527	-	99	38.587	ENSAMXG00000032987	DXO	82	38.587	Astyanax_mexicanus
ENSCSAVG00000009527	-	99	38.398	ENSBTAG00000005588	DXO	85	38.398	Bos_taurus
ENSCSAVG00000009527	-	99	38.398	ENSCJAG00000002246	DXO	86	38.674	Callithrix_jacchus
ENSCSAVG00000009527	-	98	36.695	ENSCAFG00000000694	DXO	91	36.695	Canis_familiaris
ENSCSAVG00000009527	-	99	37.017	ENSCAFG00020000953	DXO	85	37.017	Canis_lupus_dingo
ENSCSAVG00000009527	-	99	38.525	ENSCHIG00000024555	DXO	87	38.525	Capra_hircus
ENSCSAVG00000009527	-	99	38.122	ENSTSYG00000037337	DXO	86	38.122	Carlito_syrichta
ENSCSAVG00000009527	-	99	38.122	ENSCPOG00000015108	DXO	85	38.398	Cavia_porcellus
ENSCSAVG00000009527	-	99	38.398	ENSCCAG00000036575	DXO	86	38.674	Cebus_capucinus
ENSCSAVG00000009527	-	99	38.398	ENSCATG00000001700	DXO	86	38.674	Cercocebus_atys
ENSCSAVG00000009527	-	99	37.293	ENSCLAG00000006682	DXO	85	37.569	Chinchilla_lanigera
ENSCSAVG00000009527	-	99	38.398	ENSCSAG00000009007	DXO	86	38.674	Chlorocebus_sabaeus
ENSCSAVG00000009527	-	99	36.464	ENSCPBG00000001233	DXO	87	36.464	Chrysemys_picta_bellii
ENSCSAVG00000009527	-	100	72.222	ENSCING00000000512	-	99	72.222	Ciona_intestinalis
ENSCSAVG00000009527	-	99	38.674	ENSCANG00000039839	DXO	86	38.950	Colobus_angolensis_palliatus
ENSCSAVG00000009527	-	99	38.122	ENSCGRG00001001718	Dxo	85	38.122	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009527	-	99	39.617	ENSCSEG00000014295	DXO	80	39.617	Cynoglossus_semilaevis
ENSCSAVG00000009527	-	99	42.740	ENSCVAG00000019072	DXO	81	42.740	Cyprinodon_variegatus
ENSCSAVG00000009527	-	99	37.569	ENSDNOG00000038155	DXO	85	37.569	Dasypus_novemcinctus
ENSCSAVG00000009527	-	99	37.845	ENSDORG00000011708	Dxo	85	37.845	Dipodomys_ordii
ENSCSAVG00000009527	-	99	36.464	ENSETEG00000009525	DXO	86	36.740	Echinops_telfairi
ENSCSAVG00000009527	-	100	39.058	ENSEBUG00000003794	DXO	81	36.272	Eptatretus_burgeri
ENSCSAVG00000009527	-	99	38.122	ENSEASG00005015528	DXO	85	38.122	Equus_asinus_asinus
ENSCSAVG00000009527	-	99	38.122	ENSECAG00000019694	DXO	85	38.122	Equus_caballus
ENSCSAVG00000009527	-	79	39.785	ENSEEUG00000005411	DXO	84	39.785	Erinaceus_europaeus
ENSCSAVG00000009527	-	99	38.525	ENSELUG00000005464	DXO	79	38.525	Esox_lucius
ENSCSAVG00000009527	-	99	37.845	ENSFCAG00000004520	DXO	85	37.845	Felis_catus
ENSCSAVG00000009527	-	99	38.122	ENSFDAG00000004264	DXO	86	38.398	Fukomys_damarensis
ENSCSAVG00000009527	-	99	40.437	ENSFHEG00000014408	DXO	81	40.437	Fundulus_heteroclitus
ENSCSAVG00000009527	-	99	38.356	ENSGMOG00000008886	DXO	85	38.356	Gadus_morhua
ENSCSAVG00000009527	-	99	40.608	ENSGAFG00000020264	DXO	81	40.884	Gambusia_affinis
ENSCSAVG00000009527	-	99	39.891	ENSGACG00000011578	DXO	86	39.891	Gasterosteus_aculeatus
ENSCSAVG00000009527	-	99	38.398	ENSGGOG00000002277	DXO	86	38.674	Gorilla_gorilla
ENSCSAVG00000009527	-	99	40.327	ENSHBUG00000012997	DXO	80	40.327	Haplochromis_burtoni
ENSCSAVG00000009527	-	99	38.398	ENSHGLG00000016585	DOM3Z	92	37.464	Heterocephalus_glaber_female
ENSCSAVG00000009527	-	99	38.398	ENSHGLG00000016572	DOM3Z	92	43.333	Heterocephalus_glaber_female
ENSCSAVG00000009527	-	99	38.398	ENSHGLG00100013105	DXO	85	38.398	Heterocephalus_glaber_male
ENSCSAVG00000009527	-	99	39.227	ENSHCOG00000018279	DXO	82	39.227	Hippocampus_comes
ENSCSAVG00000009527	-	99	37.047	ENSHCOG00000013410	-	86	37.047	Hippocampus_comes
ENSCSAVG00000009527	-	99	37.047	ENSHCOG00000018381	DXO	93	37.047	Hippocampus_comes
ENSCSAVG00000009527	-	100	36.364	ENSHCOG00000018327	DXO	84	36.364	Hippocampus_comes
ENSCSAVG00000009527	-	99	38.674	ENSIPUG00000002976	dxo	83	38.674	Ictalurus_punctatus
ENSCSAVG00000009527	-	99	38.398	ENSSTOG00000027075	DXO	85	38.398	Ictidomys_tridecemlineatus
ENSCSAVG00000009527	-	99	38.398	ENSJJAG00000016118	Dxo	88	38.398	Jaculus_jaculus
ENSCSAVG00000009527	-	99	38.525	ENSKMAG00000018985	DXO	81	38.525	Kryptolebias_marmoratus
ENSCSAVG00000009527	-	99	39.452	ENSLBEG00000025439	DXO	80	39.452	Labrus_bergylta
ENSCSAVG00000009527	-	99	39.286	ENSLACG00000011329	DXO	94	38.950	Latimeria_chalumnae
ENSCSAVG00000009527	-	99	41.734	ENSLOCG00000008086	DXO	82	41.734	Lepisosteus_oculatus
ENSCSAVG00000009527	-	99	37.845	ENSLAFG00000014243	DXO	85	38.122	Loxodonta_africana
ENSCSAVG00000009527	-	99	38.122	ENSMFAG00000042173	DXO	86	38.398	Macaca_fascicularis
ENSCSAVG00000009527	-	99	38.398	ENSMMUG00000000741	DXO	86	38.674	Macaca_mulatta
ENSCSAVG00000009527	-	99	38.122	ENSMNEG00000032201	DXO	86	38.398	Macaca_nemestrina
ENSCSAVG00000009527	-	99	38.398	ENSMLEG00000035257	DXO	86	38.674	Mandrillus_leucophaeus
ENSCSAVG00000009527	-	99	40.599	ENSMZEG00005003714	DXO	80	40.599	Maylandia_zebra
ENSCSAVG00000009527	-	99	38.398	ENSMAUG00000022102	Dxo	85	38.674	Mesocricetus_auratus
ENSCSAVG00000009527	-	99	38.950	ENSMICG00000016605	DXO	85	39.227	Microcebus_murinus
ENSCSAVG00000009527	-	99	38.950	ENSMOCG00000005928	Dxo	85	38.950	Microtus_ochrogaster
ENSCSAVG00000009527	-	87	40.635	ENSMODG00000015027	DXO	69	40.635	Monodelphis_domestica
ENSCSAVG00000009527	-	99	38.398	MGP_CAROLIEiJ_G0021476	Dxo	81	53.333	Mus_caroli
ENSCSAVG00000009527	-	99	38.398	ENSMUSG00000040482	Dxo	92	42.202	Mus_musculus
ENSCSAVG00000009527	-	99	38.398	MGP_PahariEiJ_G0020471	Dxo	81	53.333	Mus_pahari
ENSCSAVG00000009527	-	99	38.398	MGP_SPRETEiJ_G0022381	Dxo	81	53.333	Mus_spretus
ENSCSAVG00000009527	-	99	37.673	ENSMPUG00000010562	DXO	85	37.673	Mustela_putorius_furo
ENSCSAVG00000009527	-	99	37.845	ENSMLUG00000027577	DXO	87	37.845	Myotis_lucifugus
ENSCSAVG00000009527	-	99	38.122	ENSNGAG00000021244	Dxo	85	38.122	Nannospalax_galili
ENSCSAVG00000009527	-	99	40.054	ENSNBRG00000001675	DXO	80	40.054	Neolamprologus_brichardi
ENSCSAVG00000009527	-	99	38.122	ENSNLEG00000006470	DXO	86	38.398	Nomascus_leucogenys
ENSCSAVG00000009527	-	99	37.883	ENSMEUG00000006110	DXO	83	37.883	Notamacropus_eugenii
ENSCSAVG00000009527	-	99	37.293	ENSODEG00000017552	DXO	85	37.569	Octodon_degus
ENSCSAVG00000009527	-	99	40.327	ENSONIG00000017143	DXO	85	40.327	Oreochromis_niloticus
ENSCSAVG00000009527	-	99	37.569	ENSOCUG00000007029	DXO	85	37.569	Oryctolagus_cuniculus
ENSCSAVG00000009527	-	99	40.608	ENSORLG00000008743	DXO	81	40.608	Oryzias_latipes
ENSCSAVG00000009527	-	99	40.947	ENSORLG00020018952	DXO	80	40.947	Oryzias_latipes_hni
ENSCSAVG00000009527	-	99	41.436	ENSORLG00015008419	DXO	81	41.436	Oryzias_latipes_hsok
ENSCSAVG00000009527	-	99	41.551	ENSOMEG00000011105	DXO	81	41.551	Oryzias_melastigma
ENSCSAVG00000009527	-	99	37.569	ENSOGAG00000009590	DXO	85	37.569	Otolemur_garnettii
ENSCSAVG00000009527	-	87	42.222	ENSOARG00000002332	DXO	71	42.222	Ovis_aries
ENSCSAVG00000009527	-	99	38.398	ENSPPAG00000041236	DXO	86	38.674	Pan_paniscus
ENSCSAVG00000009527	-	99	37.569	ENSPPRG00000005199	DXO	85	37.569	Panthera_pardus
ENSCSAVG00000009527	-	99	37.569	ENSPTIG00000021529	DXO	85	37.569	Panthera_tigris_altaica
ENSCSAVG00000009527	-	99	38.398	ENSPTRG00000045498	-	86	38.674	Pan_troglodytes
ENSCSAVG00000009527	-	99	38.398	ENSPTRG00000052503	-	86	38.674	Pan_troglodytes
ENSCSAVG00000009527	-	99	38.398	ENSPANG00000017587	DXO	86	38.674	Papio_anubis
ENSCSAVG00000009527	-	99	39.266	ENSPMGG00000022188	DXO	77	39.266	Periophthalmus_magnuspinnatus
ENSCSAVG00000009527	-	99	38.398	ENSPEMG00000009229	Dxo	85	38.398	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009527	-	99	42.541	ENSPMAG00000008156	DXO	95	42.541	Petromyzon_marinus
ENSCSAVG00000009527	-	99	37.883	ENSPCIG00000018793	DXO	84	37.883	Phascolarctos_cinereus
ENSCSAVG00000009527	-	99	41.713	ENSPFOG00000004778	DXO	81	41.713	Poecilia_formosa
ENSCSAVG00000009527	-	99	41.713	ENSPLAG00000015246	DXO	81	41.713	Poecilia_latipinna
ENSCSAVG00000009527	-	99	41.713	ENSPMEG00000001371	DXO	81	41.713	Poecilia_mexicana
ENSCSAVG00000009527	-	99	38.398	ENSPPYG00000016473	DXO	86	38.674	Pongo_abelii
ENSCSAVG00000009527	-	99	37.569	ENSPCAG00000004354	DXO	85	37.845	Procavia_capensis
ENSCSAVG00000009527	-	99	38.674	ENSPCOG00000016641	DXO	85	38.674	Propithecus_coquereli
ENSCSAVG00000009527	-	99	37.569	ENSPVAG00000005137	DXO	85	37.569	Pteropus_vampyrus
ENSCSAVG00000009527	-	99	40.054	ENSPNYG00000018482	DXO	80	40.054	Pundamilia_nyererei
ENSCSAVG00000009527	-	99	38.753	ENSPNAG00000016499	DXO	82	38.753	Pygocentrus_nattereri
ENSCSAVG00000009527	-	99	38.674	ENSRNOG00000000422	Dxo	85	38.674	Rattus_norvegicus
ENSCSAVG00000009527	-	99	38.674	ENSRBIG00000044693	DXO	86	38.950	Rhinopithecus_bieti
ENSCSAVG00000009527	-	99	38.398	ENSRROG00000035555	DXO	86	38.674	Rhinopithecus_roxellana
ENSCSAVG00000009527	-	99	38.919	ENSSBOG00000035395	DXO	86	39.189	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009527	-	99	36.490	ENSSHAG00000009052	DXO	85	36.490	Sarcophilus_harrisii
ENSCSAVG00000009527	-	99	38.674	ENSSFOG00015003736	dxo	82	38.525	Scleropages_formosus
ENSCSAVG00000009527	-	99	40.055	ENSSMAG00000015443	DXO	80	40.055	Scophthalmus_maximus
ENSCSAVG00000009527	-	98	39.665	ENSSDUG00000009756	DXO	86	39.665	Seriola_dumerili
ENSCSAVG00000009527	-	99	38.798	ENSSLDG00000022817	DXO	79	38.798	Seriola_lalandi_dorsalis
ENSCSAVG00000009527	-	64	39.634	ENSSPUG00000012861	DXO	69	38.415	Sphenodon_punctatus
ENSCSAVG00000009527	-	99	40.599	ENSSPAG00000009427	DXO	80	40.599	Stegastes_partitus
ENSCSAVG00000009527	-	99	38.398	ENSSSCG00000001425	DXO	85	38.398	Sus_scrofa
ENSCSAVG00000009527	-	99	38.525	ENSTRUG00000021219	DXO	83	38.525	Takifugu_rubripes
ENSCSAVG00000009527	-	99	35.734	ENSTNIG00000000151	-	92	35.556	Tetraodon_nigroviridis
ENSCSAVG00000009527	-	99	32.873	ENSTTRG00000005937	DXO	86	32.873	Tursiops_truncatus
ENSCSAVG00000009527	-	99	37.709	ENSUAMG00000024335	DXO	85	37.709	Ursus_americanus
ENSCSAVG00000009527	-	99	37.845	ENSUMAG00000012641	DXO	89	41.083	Ursus_maritimus
ENSCSAVG00000009527	-	59	44.860	ENSVPAG00000000292	-	98	44.860	Vicugna_pacos
ENSCSAVG00000009527	-	99	37.293	ENSVVUG00000023270	DXO	85	37.293	Vulpes_vulpes
ENSCSAVG00000009527	-	99	38.292	ENSXETG00000027585	dxo	89	38.292	Xenopus_tropicalis
ENSCSAVG00000009527	-	99	39.779	ENSXMAG00000001092	DXO	81	39.779	Xiphophorus_maculatus