EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2747 bases
Position: chrreftig_16:2395055-2397801
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016217	Ribosomal_S18	PF01084.20	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016398	-	620	-	ENSCSAVP00000016217	173 (aa)	-	H2ZF51

Gene Model

Click here to download ENSCSAVG00000009539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009539's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009539	-	89	38.037	ENSG00000096080	MRPS18A	83	38.739	Homo_sapiens
ENSCSAVG00000009539	-	84	35.484	ENSAMEG00000012117	MRPS18A	76	35.484	Ailuropoda_melanoleuca
ENSCSAVG00000009539	-	50	37.363	ENSAOCG00000005723	mrps18a	52	37.363	Amphiprion_ocellaris
ENSCSAVG00000009539	-	79	39.310	ENSAPEG00000006971	mrps18a	68	39.310	Amphiprion_percula
ENSCSAVG00000009539	-	62	41.284	ENSATEG00000003132	mrps18a	52	41.284	Anabas_testudineus
ENSCSAVG00000009539	-	69	40.984	ENSAPLG00000016280	MRPS18A	76	40.984	Anas_platyrhynchos
ENSCSAVG00000009539	-	72	40.458	ENSACAG00000000642	MRPS18A	66	40.458	Anolis_carolinensis
ENSCSAVG00000009539	-	88	37.654	ENSANAG00000030889	MRPS18A	83	38.739	Aotus_nancymaae
ENSCSAVG00000009539	-	87	36.943	ENSACLG00000008170	mrps18a	80	36.486	Astatotilapia_calliptera
ENSCSAVG00000009539	-	79	36.429	ENSAMXG00000036348	mrps18a	66	36.429	Astyanax_mexicanus
ENSCSAVG00000009539	-	54	45.263	ENSAMXG00000036055	-	71	45.263	Astyanax_mexicanus
ENSCSAVG00000009539	-	89	34.568	ENSBTAG00000025571	MRPS18A	81	34.568	Bos_taurus
ENSCSAVG00000009539	-	88	36.250	ENSCJAG00000017382	MRPS18A	81	37.037	Callithrix_jacchus
ENSCSAVG00000009539	-	88	34.783	ENSCAFG00000001928	MRPS18A	80	34.783	Canis_familiaris
ENSCSAVG00000009539	-	84	35.294	ENSCAFG00020012064	MRPS18A	63	35.294	Canis_lupus_dingo
ENSCSAVG00000009539	-	89	33.333	ENSCHIG00000013039	MRPS18A	81	33.333	Capra_hircus
ENSCSAVG00000009539	-	89	35.185	ENSTSYG00000001390	MRPS18A	83	36.364	Carlito_syrichta
ENSCSAVG00000009539	-	54	42.105	ENSCAPG00000016029	MRPS18A	59	42.105	Cavia_aperea
ENSCSAVG00000009539	-	84	34.667	ENSCPOG00000022949	MRPS18A	76	34.667	Cavia_porcellus
ENSCSAVG00000009539	-	89	37.423	ENSCCAG00000021108	MRPS18A	81	37.423	Cebus_capucinus
ENSCSAVG00000009539	-	82	37.671	ENSCATG00000012963	MRPS18A	83	37.838	Cercocebus_atys
ENSCSAVG00000009539	-	84	36.364	ENSCLAG00000012929	MRPS18A	76	36.364	Chinchilla_lanigera
ENSCSAVG00000009539	-	82	37.671	ENSCSAG00000012127	MRPS18A	74	37.415	Chlorocebus_sabaeus
ENSCSAVG00000009539	-	87	36.364	ENSCPBG00000025243	MRPS18A	79	36.364	Chrysemys_picta_bellii
ENSCSAVG00000009539	-	95	78.049	ENSCING00000024771	-	85	78.049	Ciona_intestinalis
ENSCSAVG00000009539	-	89	36.478	ENSCANG00000039873	MRPS18A	83	37.838	Colobus_angolensis_palliatus
ENSCSAVG00000009539	-	85	37.255	ENSCSEG00000019650	mrps18a	68	37.255	Cynoglossus_semilaevis
ENSCSAVG00000009539	-	95	34.503	ENSCVAG00000006511	mrps18a	81	34.503	Cyprinodon_variegatus
ENSCSAVG00000009539	-	83	38.667	ENSDARG00000024465	mrps18a	70	39.333	Danio_rerio
ENSCSAVG00000009539	-	88	33.750	ENSDNOG00000035755	MRPS18A	79	33.750	Dasypus_novemcinctus
ENSCSAVG00000009539	-	89	36.646	ENSDORG00000014583	Mrps18a	81	36.646	Dipodomys_ordii
ENSCSAVG00000009539	-	54	34.737	FBgn0051450	mRpS18A	61	34.737	Drosophila_melanogaster
ENSCSAVG00000009539	-	82	35.862	ENSEASG00005003485	MRPS18A	53	35.862	Equus_asinus_asinus
ENSCSAVG00000009539	-	82	35.172	ENSECAG00000004870	MRPS18A	53	35.172	Equus_caballus
ENSCSAVG00000009539	-	79	37.589	ENSELUG00000005253	mrps18a	66	38.971	Esox_lucius
ENSCSAVG00000009539	-	88	34.161	ENSFCAG00000036031	MRPS18A	83	35.780	Felis_catus
ENSCSAVG00000009539	-	75	40.602	ENSFALG00000011356	MRPS18A	69	40.602	Ficedula_albicollis
ENSCSAVG00000009539	-	72	36.719	ENSFDAG00000012875	MRPS18A	64	36.719	Fukomys_damarensis
ENSCSAVG00000009539	-	87	37.580	ENSFHEG00000009014	mrps18a	74	37.580	Fundulus_heteroclitus
ENSCSAVG00000009539	-	93	36.571	ENSGMOG00000012493	mrps18a	84	36.571	Gadus_morhua
ENSCSAVG00000009539	-	68	38.333	ENSGALG00000010296	MRPS18A	82	38.333	Gallus_gallus
ENSCSAVG00000009539	-	87	38.854	ENSGAFG00000005211	mrps18a	78	36.913	Gambusia_affinis
ENSCSAVG00000009539	-	97	32.948	ENSGACG00000013370	mrps18a	75	35.669	Gasterosteus_aculeatus
ENSCSAVG00000009539	-	83	36.735	ENSGAGG00000017954	MRPS18A	78	36.735	Gopherus_agassizii
ENSCSAVG00000009539	-	89	38.037	ENSGGOG00000006303	-	83	38.739	Gorilla_gorilla
ENSCSAVG00000009539	-	87	36.943	ENSHBUG00000014682	mrps18a	74	36.943	Haplochromis_burtoni
ENSCSAVG00000009539	-	88	34.395	ENSHGLG00000014356	MRPS18A	79	34.395	Heterocephalus_glaber_female
ENSCSAVG00000009539	-	88	34.395	ENSHGLG00100010988	MRPS18A	79	34.395	Heterocephalus_glaber_male
ENSCSAVG00000009539	-	84	35.065	ENSIPUG00000017406	mrps18a	74	35.714	Ictalurus_punctatus
ENSCSAVG00000009539	-	84	32.500	ENSSTOG00000004490	MRPS18A	77	32.500	Ictidomys_tridecemlineatus
ENSCSAVG00000009539	-	90	37.805	ENSJJAG00000006567	Mrps18a	79	37.805	Jaculus_jaculus
ENSCSAVG00000009539	-	79	38.028	ENSKMAG00000014910	mrps18a	67	38.028	Kryptolebias_marmoratus
ENSCSAVG00000009539	-	87	36.306	ENSLBEG00000003391	mrps18a	74	36.306	Labrus_bergylta
ENSCSAVG00000009539	-	54	47.475	ENSLACG00000022160	mrps18a	57	47.475	Latimeria_chalumnae
ENSCSAVG00000009539	-	88	33.758	ENSLAFG00000001168	MRPS18A	80	33.758	Loxodonta_africana
ENSCSAVG00000009539	-	82	37.671	ENSMFAG00000038311	MRPS18A	83	37.838	Macaca_fascicularis
ENSCSAVG00000009539	-	82	37.671	ENSMMUG00000014749	MRPS18A	83	37.838	Macaca_mulatta
ENSCSAVG00000009539	-	82	37.671	ENSMNEG00000044642	MRPS18A	83	37.838	Macaca_nemestrina
ENSCSAVG00000009539	-	85	33.987	ENSMAMG00000015478	mrps18a	73	33.987	Mastacembelus_armatus
ENSCSAVG00000009539	-	87	36.943	ENSMZEG00005014925	mrps18a	80	36.486	Maylandia_zebra
ENSCSAVG00000009539	-	77	40.441	ENSMGAG00000010915	MRPS18A	71	40.441	Meleagris_gallopavo
ENSCSAVG00000009539	-	87	36.129	ENSMICG00000005062	MRPS18A	81	35.577	Microcebus_murinus
ENSCSAVG00000009539	-	90	38.182	ENSMOCG00000021207	-	79	38.182	Microtus_ochrogaster
ENSCSAVG00000009539	-	87	36.943	ENSMMOG00000015248	mrps18a	75	36.943	Mola_mola
ENSCSAVG00000009539	-	79	37.324	ENSMALG00000017044	mrps18a	61	37.324	Monopterus_albus
ENSCSAVG00000009539	-	90	37.888	MGP_CAROLIEiJ_G0021656	Mrps18a	87	36.641	Mus_caroli
ENSCSAVG00000009539	-	90	37.888	ENSMUSG00000023967	Mrps18a	87	36.641	Mus_musculus
ENSCSAVG00000009539	-	90	38.788	MGP_PahariEiJ_G0020648	Mrps18a	87	37.778	Mus_pahari
ENSCSAVG00000009539	-	90	37.888	MGP_SPRETEiJ_G0022568	Mrps18a	87	36.641	Mus_spretus
ENSCSAVG00000009539	-	84	35.065	ENSMPUG00000012868	MRPS18A	63	35.065	Mustela_putorius_furo
ENSCSAVG00000009539	-	89	33.544	ENSMLUG00000017755	MRPS18A	81	33.544	Myotis_lucifugus
ENSCSAVG00000009539	-	79	37.241	ENSNGAG00000020052	Mrps18a	71	37.241	Nannospalax_galili
ENSCSAVG00000009539	-	78	37.589	ENSNBRG00000021152	mrps18a	67	37.589	Neolamprologus_brichardi
ENSCSAVG00000009539	-	89	38.650	ENSNLEG00000003865	MRPS18A	83	39.640	Nomascus_leucogenys
ENSCSAVG00000009539	-	74	36.364	ENSODEG00000015388	MRPS18A	67	36.364	Octodon_degus
ENSCSAVG00000009539	-	79	37.063	ENSONIG00000000609	mrps18a	68	37.063	Oreochromis_niloticus
ENSCSAVG00000009539	-	79	36.429	ENSOANG00000001955	MRPS18A	88	36.429	Ornithorhynchus_anatinus
ENSCSAVG00000009539	-	89	38.037	ENSOCUG00000005544	MRPS18A	81	38.037	Oryctolagus_cuniculus
ENSCSAVG00000009539	-	87	37.736	ENSORLG00000023864	mrps18a	74	37.736	Oryzias_latipes
ENSCSAVG00000009539	-	87	37.736	ENSORLG00020002882	mrps18a	74	37.736	Oryzias_latipes_hni
ENSCSAVG00000009539	-	87	36.478	ENSORLG00015022065	mrps18a	74	36.478	Oryzias_latipes_hsok
ENSCSAVG00000009539	-	78	41.135	ENSOMEG00000018124	mrps18a	67	41.135	Oryzias_melastigma
ENSCSAVG00000009539	-	88	33.974	ENSOGAG00000026551	MRPS18A	79	33.974	Otolemur_garnettii
ENSCSAVG00000009539	-	89	33.333	ENSOARG00000008279	MRPS18A	81	33.333	Ovis_aries
ENSCSAVG00000009539	-	89	38.037	ENSPPAG00000036291	MRPS18A	83	38.739	Pan_paniscus
ENSCSAVG00000009539	-	89	33.951	ENSPPRG00000006429	MRPS18A	83	35.455	Panthera_pardus
ENSCSAVG00000009539	-	88	33.758	ENSPTIG00000001653	MRPS18A	83	35.238	Panthera_tigris_altaica
ENSCSAVG00000009539	-	89	38.037	ENSPTRG00000018209	MRPS18A	83	38.739	Pan_troglodytes
ENSCSAVG00000009539	-	82	37.671	ENSPANG00000006967	MRPS18A	83	37.838	Papio_anubis
ENSCSAVG00000009539	-	88	35.032	ENSPKIG00000012807	mrps18a	67	35.032	Paramormyrops_kingsleyae
ENSCSAVG00000009539	-	82	40.136	ENSPSIG00000013672	MRPS18A	76	40.136	Pelodiscus_sinensis
ENSCSAVG00000009539	-	90	37.888	ENSPEMG00000000405	Mrps18a	79	37.888	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009539	-	88	36.943	ENSPMAG00000007012	mrps18a	85	36.943	Petromyzon_marinus
ENSCSAVG00000009539	-	82	34.694	ENSPCIG00000024858	MRPS18A	77	34.746	Phascolarctos_cinereus
ENSCSAVG00000009539	-	87	38.854	ENSPFOG00000009046	mrps18a	97	38.854	Poecilia_formosa
ENSCSAVG00000009539	-	87	38.217	ENSPLAG00000011106	mrps18a	74	38.217	Poecilia_latipinna
ENSCSAVG00000009539	-	87	39.490	ENSPMEG00000000736	mrps18a	74	39.490	Poecilia_mexicana
ENSCSAVG00000009539	-	78	39.007	ENSPREG00000012172	mrps18a	70	38.346	Poecilia_reticulata
ENSCSAVG00000009539	-	89	38.037	ENSPPYG00000017282	MRPS18A	81	38.037	Pongo_abelii
ENSCSAVG00000009539	-	59	37.963	ENSPCAG00000004192	MRPS18A	50	37.963	Procavia_capensis
ENSCSAVG00000009539	-	84	36.364	ENSPCOG00000014911	MRPS18A	76	38.235	Propithecus_coquereli
ENSCSAVG00000009539	-	87	36.943	ENSPNYG00000014753	mrps18a	74	36.943	Pundamilia_nyererei
ENSCSAVG00000009539	-	87	35.256	ENSPNAG00000023462	mrps18a	74	35.256	Pygocentrus_nattereri
ENSCSAVG00000009539	-	82	36.054	ENSRNOG00000019511	Mrps18a	74	36.054	Rattus_norvegicus
ENSCSAVG00000009539	-	89	37.107	ENSRBIG00000028789	MRPS18A	83	37.838	Rhinopithecus_bieti
ENSCSAVG00000009539	-	89	37.107	ENSRROG00000042368	-	83	37.838	Rhinopithecus_roxellana
ENSCSAVG00000009539	-	88	36.420	ENSSBOG00000019943	MRPS18A	83	36.937	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009539	-	79	34.286	ENSSHAG00000015048	-	71	34.286	Sarcophilus_harrisii
ENSCSAVG00000009539	-	79	41.259	ENSSFOG00015005628	mrps18a	67	41.259	Scleropages_formosus
ENSCSAVG00000009539	-	98	33.523	ENSSMAG00000009353	mrps18a	83	33.523	Scophthalmus_maximus
ENSCSAVG00000009539	-	53	45.263	ENSSDUG00000011655	mrps18a	52	45.263	Seriola_dumerili
ENSCSAVG00000009539	-	62	42.727	ENSSLDG00000025435	mrps18a	58	42.727	Seriola_lalandi_dorsalis
ENSCSAVG00000009539	-	69	38.211	ENSSPUG00000011517	MRPS18A	64	38.211	Sphenodon_punctatus
ENSCSAVG00000009539	-	88	35.220	ENSSPAG00000000034	mrps18a	75	35.220	Stegastes_partitus
ENSCSAVG00000009539	-	88	33.758	ENSSSCG00000001692	MRPS18A	80	33.758	Sus_scrofa
ENSCSAVG00000009539	-	73	38.760	ENSTGUG00000008142	MRPS18A	87	38.760	Taeniopygia_guttata
ENSCSAVG00000009539	-	88	34.810	ENSTRUG00000025134	mrps18a	75	34.810	Takifugu_rubripes
ENSCSAVG00000009539	-	97	35.260	ENSTNIG00000016302	mrps18a	82	35.260	Tetraodon_nigroviridis
ENSCSAVG00000009539	-	84	34.839	ENSUAMG00000013758	MRPS18A	76	34.839	Ursus_americanus
ENSCSAVG00000009539	-	84	34.416	ENSUMAG00000005910	MRPS18A	76	34.416	Ursus_maritimus
ENSCSAVG00000009539	-	84	35.294	ENSVVUG00000029092	-	76	35.294	Vulpes_vulpes
ENSCSAVG00000009539	-	60	43.519	ENSXETG00000003270	mrps18a	70	43.519	Xenopus_tropicalis
ENSCSAVG00000009539	-	62	41.818	ENSXCOG00000007223	mrps18a	58	41.818	Xiphophorus_couchianus
ENSCSAVG00000009539	-	87	36.306	ENSXMAG00000004867	mrps18a	74	36.306	Xiphophorus_maculatus