EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000009542 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
624 bases
Position
chrreftig_16:2440269-2440892
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000016221LSMPF01423.225.6e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000016402-624-ENSCSAVP00000016221104 (aa)-H2ZF55
Gene Model
Click here to download ENSCSAVG00000009542's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009542's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000009542-7634.146ENSCSAVG00000003527-6735.227
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000009542-10081.731ENSG00000170860LSM310081.731Homo_sapiens
ENSCSAVG00000009542-10080.769ENSAPOG00000018947lsm310080.769Acanthochromis_polyacanthus
ENSCSAVG00000009542-10081.731ENSAMEG00000009405LSM310081.731Ailuropoda_melanoleuca
ENSCSAVG00000009542-10080.769ENSACIG00000004574lsm37180.769Amphilophus_citrinellus
ENSCSAVG00000009542-10080.769ENSAOCG00000007658lsm310080.769Amphiprion_ocellaris
ENSCSAVG00000009542-10080.769ENSAPEG00000018621lsm310080.769Amphiprion_percula
ENSCSAVG00000009542-10080.769ENSATEG00000005153lsm310080.769Anabas_testudineus
ENSCSAVG00000009542-8983.871ENSAPLG00000014499LSM39883.871Anas_platyrhynchos
ENSCSAVG00000009542-10082.692ENSACAG00000013503LSM310082.692Anolis_carolinensis
ENSCSAVG00000009542-10081.731ENSANAG00000034627LSM310081.731Aotus_nancymaae
ENSCSAVG00000009542-10078.846ENSANAG00000002903-10078.846Aotus_nancymaae
ENSCSAVG00000009542-9381.443ENSACLG00000001726-9481.443Astatotilapia_calliptera
ENSCSAVG00000009542-10082.692ENSAMXG00000041214lsm310082.692Astyanax_mexicanus
ENSCSAVG00000009542-9383.505ENSBTAG00000007363LSM310083.505Bos_taurus
ENSCSAVG00000009542-9573.737WBGene00003077lsm-39773.737Caenorhabditis_elegans
ENSCSAVG00000009542-10079.808ENSCAFG00000001760LSM310079.808Canis_familiaris
ENSCSAVG00000009542-10079.808ENSCAFG00020017266-10079.808Canis_lupus_dingo
ENSCSAVG00000009542-10079.808ENSCAFG00020021584-10079.808Canis_lupus_dingo
ENSCSAVG00000009542-10078.846ENSCAFG00020026452-10078.846Canis_lupus_dingo
ENSCSAVG00000009542-10073.394ENSCAFG00020020950-10073.394Canis_lupus_dingo
ENSCSAVG00000009542-10075.000ENSCAFG00020016680-10075.000Canis_lupus_dingo
ENSCSAVG00000009542-10081.731ENSCHIG00000024650LSM310081.731Capra_hircus
ENSCSAVG00000009542-9964.078ENSTSYG00000028528-9964.078Carlito_syrichta
ENSCSAVG00000009542-10080.769ENSTSYG00000005204-10080.769Carlito_syrichta
ENSCSAVG00000009542-9383.505ENSCAPG00000015760LSM310083.505Cavia_aperea
ENSCSAVG00000009542-10081.731ENSCPOG00000034071LSM310081.731Cavia_porcellus
ENSCSAVG00000009542-10081.731ENSCCAG00000019503-10081.731Cebus_capucinus
ENSCSAVG00000009542-10081.731ENSCCAG00000036499-10081.731Cebus_capucinus
ENSCSAVG00000009542-10064.423ENSCCAG00000032763-10064.423Cebus_capucinus
ENSCSAVG00000009542-10081.731ENSCATG00000039421LSM310081.731Cercocebus_atys
ENSCSAVG00000009542-9964.078ENSCATG00000031630-9964.078Cercocebus_atys
ENSCSAVG00000009542-10081.731ENSCLAG00000015997LSM310081.731Chinchilla_lanigera
ENSCSAVG00000009542-10076.923ENSCSAG00000019525-10076.923Chlorocebus_sabaeus
ENSCSAVG00000009542-10082.692ENSCPBG00000014531LSM310082.692Chrysemys_picta_bellii
ENSCSAVG00000009542-10080.769ENSCANG00000038037-10080.769Colobus_angolensis_palliatus
ENSCSAVG00000009542-10081.731ENSCANG00000033944-10081.731Colobus_angolensis_palliatus
ENSCSAVG00000009542-10078.846ENSCANG00000018782-10078.846Colobus_angolensis_palliatus
ENSCSAVG00000009542-9869.608ENSCGRG00001011396-10069.608Cricetulus_griseus_chok1gshd
ENSCSAVG00000009542-10081.731ENSCGRG00001017598Lsm310081.731Cricetulus_griseus_chok1gshd
ENSCSAVG00000009542-7772.840ENSCGRG00001008639-8772.840Cricetulus_griseus_chok1gshd
ENSCSAVG00000009542-10081.731ENSCGRG00000016159Lsm310081.731Cricetulus_griseus_crigri
ENSCSAVG00000009542-8970.968ENSCGRG00000012129-9870.968Cricetulus_griseus_crigri
ENSCSAVG00000009542-10080.769ENSCSEG00000015071lsm37780.769Cynoglossus_semilaevis
ENSCSAVG00000009542-10079.808ENSCVAG00000006933lsm310079.808Cyprinodon_variegatus
ENSCSAVG00000009542-10081.731ENSDARG00000089663lsm310081.731Danio_rerio
ENSCSAVG00000009542-10081.731ENSDNOG00000030808LSM310081.731Dasypus_novemcinctus
ENSCSAVG00000009542-10081.731ENSDORG00000006894-10081.731Dipodomys_ordii
ENSCSAVG00000009542-10064.423ENSDORG00000024490-10064.423Dipodomys_ordii
ENSCSAVG00000009542-10080.769FBgn0051184LSm310080.769Drosophila_melanogaster
ENSCSAVG00000009542-10081.731ENSETEG00000016207LSM310081.731Echinops_telfairi
ENSCSAVG00000009542-9680.000ENSEBUG00000004943lsm39880.000Eptatretus_burgeri
ENSCSAVG00000009542-10081.731ENSEASG00005015443LSM310081.731Equus_asinus_asinus
ENSCSAVG00000009542-10081.731ENSECAG00000007803LSM310081.731Equus_caballus
ENSCSAVG00000009542-10081.731ENSELUG00000018922lsm310081.731Esox_lucius
ENSCSAVG00000009542-10081.731ENSFCAG00000038453LSM310081.731Felis_catus
ENSCSAVG00000009542-10062.500ENSFCAG00000044344-10062.500Felis_catus
ENSCSAVG00000009542-10082.692ENSFALG00000012644LSM310082.692Ficedula_albicollis
ENSCSAVG00000009542-10081.731ENSFDAG00000011470LSM310081.731Fukomys_damarensis
ENSCSAVG00000009542-10080.769ENSFHEG00000000876lsm310080.769Fundulus_heteroclitus
ENSCSAVG00000009542-8983.871ENSGMOG00000011024lsm39883.871Gadus_morhua
ENSCSAVG00000009542-10080.769ENSGAFG00000013965lsm310080.769Gambusia_affinis
ENSCSAVG00000009542-10080.769ENSGACG00000003488lsm310080.769Gasterosteus_aculeatus
ENSCSAVG00000009542-10082.692ENSGAGG00000025707LSM310082.692Gopherus_agassizii
ENSCSAVG00000009542-10081.731ENSGGOG00000010006LSM310081.731Gorilla_gorilla
ENSCSAVG00000009542-10080.769ENSHBUG00000022399lsm310080.769Haplochromis_burtoni
ENSCSAVG00000009542-10081.731ENSHGLG00000000651LSM310081.731Heterocephalus_glaber_female
ENSCSAVG00000009542-10064.423ENSHGLG00000015564-10064.423Heterocephalus_glaber_female
ENSCSAVG00000009542-10064.423ENSHGLG00100010658-10064.423Heterocephalus_glaber_male
ENSCSAVG00000009542-10081.731ENSHGLG00100011343LSM310081.731Heterocephalus_glaber_male
ENSCSAVG00000009542-10081.731ENSHCOG00000013481lsm310081.731Hippocampus_comes
ENSCSAVG00000009542-10079.808ENSIPUG00000009207lsm39882.000Ictalurus_punctatus
ENSCSAVG00000009542-10081.731ENSSTOG00000006842LSM310081.731Ictidomys_tridecemlineatus
ENSCSAVG00000009542-10075.962ENSJJAG00000012797-10075.962Jaculus_jaculus
ENSCSAVG00000009542-10081.731ENSJJAG00000017351Lsm310081.731Jaculus_jaculus
ENSCSAVG00000009542-9965.049ENSJJAG00000018311-10065.049Jaculus_jaculus
ENSCSAVG00000009542-10081.731ENSKMAG00000015182lsm310081.731Kryptolebias_marmoratus
ENSCSAVG00000009542-9380.412ENSLBEG00000021292lsm39980.412Labrus_bergylta
ENSCSAVG00000009542-10084.615ENSLOCG00000013560lsm310084.615Lepisosteus_oculatus
ENSCSAVG00000009542-10082.692ENSLAFG00000023308LSM310082.692Loxodonta_africana
ENSCSAVG00000009542-10081.731ENSMFAG00000003185LSM310081.731Macaca_fascicularis
ENSCSAVG00000009542-10081.731ENSMMUG00000023126LSM310081.731Macaca_mulatta
ENSCSAVG00000009542-9465.306ENSMMUG00000002294-9265.306Macaca_mulatta
ENSCSAVG00000009542-10063.462ENSMMUG00000043596-10063.462Macaca_mulatta
ENSCSAVG00000009542-10081.731ENSMNEG00000043632LSM310081.731Macaca_nemestrina
ENSCSAVG00000009542-9966.019ENSMNEG00000037686-9966.019Macaca_nemestrina
ENSCSAVG00000009542-10081.731ENSMLEG00000036162LSM310081.731Mandrillus_leucophaeus
ENSCSAVG00000009542-10080.769ENSMAMG00000012807lsm310080.769Mastacembelus_armatus
ENSCSAVG00000009542-10080.769ENSMZEG00005016682lsm37380.769Maylandia_zebra
ENSCSAVG00000009542-9383.505ENSMGAG00000007776LSM310083.505Meleagris_gallopavo
ENSCSAVG00000009542-10080.769ENSMICG00000032361-10080.769Microcebus_murinus
ENSCSAVG00000009542-10068.269ENSMICG00000027821-10068.269Microcebus_murinus
ENSCSAVG00000009542-10081.731ENSMOCG00000014269Lsm310081.731Microtus_ochrogaster
ENSCSAVG00000009542-10081.731ENSMMOG00000020715lsm310081.731Mola_mola
ENSCSAVG00000009542-10081.731ENSMODG00000007275LSM310081.731Monodelphis_domestica
ENSCSAVG00000009542-10080.769ENSMALG00000006485lsm310080.769Monopterus_albus
ENSCSAVG00000009542-10081.731ENSMUSG00000034192Lsm310081.731Mus_musculus
ENSCSAVG00000009542-10081.731MGP_PahariEiJ_G0022402Lsm310081.731Mus_pahari
ENSCSAVG00000009542-10081.731MGP_SPRETEiJ_G0029681Lsm310081.731Mus_spretus
ENSCSAVG00000009542-8477.011ENSMPUG00000017256-10077.011Mustela_putorius_furo
ENSCSAVG00000009542-9973.786ENSMPUG00000019120-9973.786Mustela_putorius_furo
ENSCSAVG00000009542-10081.731ENSMLUG00000010677LSM310081.731Myotis_lucifugus
ENSCSAVG00000009542-9676.000ENSMLUG00000024700-9876.000Myotis_lucifugus
ENSCSAVG00000009542-10062.500ENSNGAG00000013716-10062.500Nannospalax_galili
ENSCSAVG00000009542-8772.222ENSNGAG00000010207-9272.222Nannospalax_galili
ENSCSAVG00000009542-10081.731ENSNGAG00000022450Lsm310081.731Nannospalax_galili
ENSCSAVG00000009542-10080.769ENSNBRG00000014318lsm310080.769Neolamprologus_brichardi
ENSCSAVG00000009542-10081.731ENSNLEG00000005079LSM310081.731Nomascus_leucogenys
ENSCSAVG00000009542-10074.038ENSNLEG00000030229-10074.038Nomascus_leucogenys
ENSCSAVG00000009542-10081.731ENSODEG00000001726LSM310081.731Octodon_degus
ENSCSAVG00000009542-10074.038ENSODEG00000019403-10074.038Octodon_degus
ENSCSAVG00000009542-10080.769ENSODEG00000019740-10080.769Octodon_degus
ENSCSAVG00000009542-10079.808ENSODEG00000019158-10079.808Octodon_degus
ENSCSAVG00000009542-10080.769ENSONIG00000021369-10080.769Oreochromis_niloticus
ENSCSAVG00000009542-10080.769ENSONIG00000000370lsm310080.769Oreochromis_niloticus
ENSCSAVG00000009542-10081.731ENSOANG00000012273LSM310081.731Ornithorhynchus_anatinus
ENSCSAVG00000009542-10079.808ENSOCUG00000011088-10079.808Oryctolagus_cuniculus
ENSCSAVG00000009542-10081.731ENSOCUG00000027653-10081.731Oryctolagus_cuniculus
ENSCSAVG00000009542-10081.731ENSORLG00000025900lsm310081.731Oryzias_latipes
ENSCSAVG00000009542-10081.731ENSORLG00020007125lsm310081.731Oryzias_latipes_hni
ENSCSAVG00000009542-10081.731ENSORLG00015002944lsm310081.731Oryzias_latipes_hsok
ENSCSAVG00000009542-10081.731ENSOMEG00000001915lsm310081.731Oryzias_melastigma
ENSCSAVG00000009542-9581.818ENSOGAG00000028858-9981.818Otolemur_garnettii
ENSCSAVG00000009542-10081.731ENSOGAG00000007659-10081.731Otolemur_garnettii
ENSCSAVG00000009542-10073.077ENSOGAG00000033051-10073.077Otolemur_garnettii
ENSCSAVG00000009542-10082.692ENSOARG00000000600LSM310082.692Ovis_aries
ENSCSAVG00000009542-10081.731ENSPPAG00000034074LSM310081.731Pan_paniscus
ENSCSAVG00000009542-10081.731ENSPPRG00000012912-10081.731Panthera_pardus
ENSCSAVG00000009542-9975.728ENSPPRG00000010610-8975.728Panthera_pardus
ENSCSAVG00000009542-10080.769ENSPPRG00000020953-10080.769Panthera_pardus
ENSCSAVG00000009542-10081.731ENSPTIG00000013072-10081.731Panthera_tigris_altaica
ENSCSAVG00000009542-10081.731ENSPTIG00000003463-10081.731Panthera_tigris_altaica
ENSCSAVG00000009542-10081.731ENSPTRG00000014650LSM310081.731Pan_troglodytes
ENSCSAVG00000009542-10081.731ENSPANG00000009378LSM310081.731Papio_anubis
ENSCSAVG00000009542-10066.346ENSPANG00000032192-10066.346Papio_anubis
ENSCSAVG00000009542-10081.731ENSPKIG00000008037lsm39181.731Paramormyrops_kingsleyae
ENSCSAVG00000009542-10082.692ENSPSIG00000015720LSM310082.692Pelodiscus_sinensis
ENSCSAVG00000009542-9481.633ENSPMGG00000012103lsm39881.633Periophthalmus_magnuspinnatus
ENSCSAVG00000009542-10081.731ENSPEMG00000015797Lsm310081.731Peromyscus_maniculatus_bairdii
ENSCSAVG00000009542-10068.269ENSPEMG00000020213-10068.269Peromyscus_maniculatus_bairdii
ENSCSAVG00000009542-10080.769ENSPFOG00000008372lsm310080.769Poecilia_formosa
ENSCSAVG00000009542-10080.769ENSPLAG00000000563lsm310080.769Poecilia_latipinna
ENSCSAVG00000009542-10080.769ENSPMEG00000022052lsm310080.769Poecilia_mexicana
ENSCSAVG00000009542-10080.769ENSPREG00000022485lsm310080.769Poecilia_reticulata
ENSCSAVG00000009542-10081.731ENSPPYG00000013402LSM310081.731Pongo_abelii
ENSCSAVG00000009542-10081.731ENSPCAG00000017077LSM310081.731Procavia_capensis
ENSCSAVG00000009542-9463.265ENSPCOG00000014435-9863.265Propithecus_coquereli
ENSCSAVG00000009542-10080.769ENSPCOG00000016217-10080.769Propithecus_coquereli
ENSCSAVG00000009542-10081.731ENSPVAG00000016795LSM310081.731Pteropus_vampyrus
ENSCSAVG00000009542-10080.769ENSPNYG00000009552lsm37380.769Pundamilia_nyererei
ENSCSAVG00000009542-10082.692ENSPNAG00000023467lsm310082.692Pygocentrus_nattereri
ENSCSAVG00000009542-10081.731ENSRNOG00000008733Lsm310081.731Rattus_norvegicus
ENSCSAVG00000009542-10068.269ENSRBIG00000043783-10068.269Rhinopithecus_bieti
ENSCSAVG00000009542-10081.731ENSRBIG00000034399LSM310081.731Rhinopithecus_bieti
ENSCSAVG00000009542-10081.731ENSRROG00000033276-10081.731Rhinopithecus_roxellana
ENSCSAVG00000009542-10072.115ENSRROG00000044047-10072.115Rhinopithecus_roxellana
ENSCSAVG00000009542-10069.231ENSRROG00000039868-10069.231Rhinopithecus_roxellana
ENSCSAVG00000009542-10066.346ENSRROG00000044056-10066.346Rhinopithecus_roxellana
ENSCSAVG00000009542-10081.731ENSSBOG00000024310LSM310081.731Saimiri_boliviensis_boliviensis
ENSCSAVG00000009542-10082.692ENSSFOG00015007071lsm310082.692Scleropages_formosus
ENSCSAVG00000009542-10080.769ENSSMAG00000001818lsm310080.769Scophthalmus_maximus
ENSCSAVG00000009542-10080.769ENSSDUG00000006040lsm310080.769Seriola_dumerili
ENSCSAVG00000009542-10080.769ENSSLDG00000006399lsm310080.769Seriola_lalandi_dorsalis
ENSCSAVG00000009542-5684.483ENSSARG00000005275-10084.483Sorex_araneus
ENSCSAVG00000009542-10074.038ENSSPUG00000005394LSM310074.038Sphenodon_punctatus
ENSCSAVG00000009542-8983.871ENSSPUG00000017047-9783.871Sphenodon_punctatus
ENSCSAVG00000009542-10069.231ENSSPAG00000000934lsm310069.231Stegastes_partitus
ENSCSAVG00000009542-10081.731ENSSSCG00000011601LSM310081.731Sus_scrofa
ENSCSAVG00000009542-9559.596ENSSSCG00000023718-9959.596Sus_scrofa
ENSCSAVG00000009542-10082.692ENSTGUG00000008327LSM310082.692Taeniopygia_guttata
ENSCSAVG00000009542-10081.731ENSTRUG00000023175lsm310081.731Takifugu_rubripes
ENSCSAVG00000009542-10081.731ENSTNIG00000005589lsm310081.731Tetraodon_nigroviridis
ENSCSAVG00000009542-10074.038ENSTBEG00000001050-9974.038Tupaia_belangeri
ENSCSAVG00000009542-10081.731ENSTTRG00000011197LSM310081.731Tursiops_truncatus
ENSCSAVG00000009542-10081.731ENSUAMG00000017250-10081.731Ursus_americanus
ENSCSAVG00000009542-10081.731ENSUMAG00000015905LSM310081.731Ursus_maritimus
ENSCSAVG00000009542-8983.871ENSVPAG00000010709LSM39883.871Vicugna_pacos
ENSCSAVG00000009542-10078.846ENSVVUG00000007332-9178.846Vulpes_vulpes
ENSCSAVG00000009542-10076.923ENSVVUG00000006481-10076.923Vulpes_vulpes
ENSCSAVG00000009542-10073.077ENSVVUG00000024228-10073.077Vulpes_vulpes
ENSCSAVG00000009542-10076.923ENSVVUG00000005684-10076.923Vulpes_vulpes
ENSCSAVG00000009542-10078.846ENSVVUG00000029294-10078.846Vulpes_vulpes
ENSCSAVG00000009542-10080.769ENSXETG00000011534lsm310080.769Xenopus_tropicalis
ENSCSAVG00000009542-10080.769ENSXCOG00000017432LSM310080.769Xiphophorus_couchianus
ENSCSAVG00000009542-10080.769ENSXMAG00000009151lsm310080.769Xiphophorus_maculatus

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