EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009574 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3211 bases
Position: chrreftig_0:1981258-1984468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	1	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	2	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	3	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	4	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	5	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	6	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	7	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	8	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	9	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	10	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	11	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	12	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	13	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	14	15
ENSCSAVP00000016271	zf-C2H2	PF00096.26	1.9e-82	15	15
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	1	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	2	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	3	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	4	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	5	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	6	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	7	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	8	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	9	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	10	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	11	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	12	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	13	14
ENSCSAVP00000016272	zf-C2H2	PF00096.26	8e-72	14	14
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	1	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	2	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	3	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	4	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	5	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	6	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	7	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	8	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	9	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	10	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	11	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	12	13
ENSCSAVP00000016273	zf-C2H2	PF00096.26	2.5e-64	13	13
ENSCSAVP00000016271	zf-met	PF12874.7	1.6e-24	1	4
ENSCSAVP00000016271	zf-met	PF12874.7	1.6e-24	2	4
ENSCSAVP00000016271	zf-met	PF12874.7	1.6e-24	3	4
ENSCSAVP00000016271	zf-met	PF12874.7	1.6e-24	4	4
ENSCSAVP00000016273	zf-met	PF12874.7	5e-21	1	5
ENSCSAVP00000016273	zf-met	PF12874.7	5e-21	2	5
ENSCSAVP00000016273	zf-met	PF12874.7	5e-21	3	5
ENSCSAVP00000016273	zf-met	PF12874.7	5e-21	4	5
ENSCSAVP00000016273	zf-met	PF12874.7	5e-21	5	5
ENSCSAVP00000016272	zf-met	PF12874.7	5.9e-19	1	3
ENSCSAVP00000016272	zf-met	PF12874.7	5.9e-19	2	3
ENSCSAVP00000016272	zf-met	PF12874.7	5.9e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016454	-	1293	-	ENSCSAVP00000016273	431 (aa)	-	H2ZFA7
ENSCSAVT00000016452	-	1791	-	ENSCSAVP00000016271	596 (aa)	-	H2ZFA5
ENSCSAVT00000016453	-	1485	-	ENSCSAVP00000016272	495 (aa)	-	H2ZFA6

Gene Model

Click here to download ENSCSAVG00000009574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009574's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009574	-	99	50.000	ENSCSAVG00000004762	-	100	50.000
ENSCSAVG00000009574	-	98	43.750	ENSCSAVG00000004543	-	100	37.719
ENSCSAVG00000009574	-	99	41.414	ENSCSAVG00000011749	-	81	41.414
ENSCSAVG00000009574	-	100	42.123	ENSCSAVG00000004678	-	99	41.809
ENSCSAVG00000009574	-	100	44.444	ENSCSAVG00000001949	-	99	44.444
ENSCSAVG00000009574	-	99	44.444	ENSCSAVG00000006650	-	99	40.000
ENSCSAVG00000009574	-	99	47.458	ENSCSAVG00000000520	-	100	47.458
ENSCSAVG00000009574	-	100	35.065	ENSCSAVG00000009217	-	99	35.256
ENSCSAVG00000009574	-	99	46.597	ENSCSAVG00000007918	-	100	46.597
ENSCSAVG00000009574	-	99	35.206	ENSCSAVG00000005896	-	72	37.652
ENSCSAVG00000009574	-	99	47.778	ENSCSAVG00000001989	-	99	52.000
ENSCSAVG00000009574	-	99	53.731	ENSCSAVG00000001808	-	100	53.731
ENSCSAVG00000009574	-	99	47.368	ENSCSAVG00000000293	-	100	44.068
ENSCSAVG00000009574	-	99	45.433	ENSCSAVG00000000649	-	99	45.433
ENSCSAVG00000009574	-	99	49.669	ENSCSAVG00000000642	-	100	49.669
ENSCSAVG00000009574	-	97	46.914	ENSCSAVG00000003690	-	100	46.914
ENSCSAVG00000009574	-	100	46.386	ENSCSAVG00000006141	-	100	46.065
ENSCSAVG00000009574	-	99	45.833	ENSCSAVG00000010960	-	100	45.833
ENSCSAVG00000009574	-	100	43.529	ENSCSAVG00000007589	-	100	43.529
ENSCSAVG00000009574	-	99	41.935	ENSCSAVG00000009819	-	97	41.935
ENSCSAVG00000009574	-	99	49.550	ENSCSAVG00000003895	-	100	49.550
ENSCSAVG00000009574	-	99	44.186	ENSCSAVG00000009583	-	100	44.419
ENSCSAVG00000009574	-	100	48.611	ENSCSAVG00000006608	-	100	43.980
ENSCSAVG00000009574	-	99	52.414	ENSCSAVG00000008862	-	100	51.748
ENSCSAVG00000009574	-	99	39.744	ENSCSAVG00000005904	-	100	39.744
ENSCSAVG00000009574	-	99	47.191	ENSCSAVG00000011146	-	90	47.191
ENSCSAVG00000009574	-	100	39.623	ENSCSAVG00000006028	-	71	39.623
ENSCSAVG00000009574	-	99	45.420	ENSCSAVG00000010156	-	99	41.980
ENSCSAVG00000009574	-	99	49.153	ENSCSAVG00000000690	-	99	49.153
ENSCSAVG00000009574	-	97	46.939	ENSCSAVG00000009421	-	52	46.939
ENSCSAVG00000009574	-	98	37.405	ENSCSAVG00000006745	-	99	32.609
ENSCSAVG00000009574	-	99	35.514	ENSCSAVG00000006729	-	71	35.514
ENSCSAVG00000009574	-	99	50.575	ENSCSAVG00000004499	-	100	47.009
ENSCSAVG00000009574	-	99	46.868	ENSCSAVG00000009953	-	99	44.583
ENSCSAVG00000009574	-	99	46.667	ENSCSAVG00000002179	-	100	48.990
ENSCSAVG00000009574	-	99	50.000	ENSCSAVG00000004703	-	100	50.000
ENSCSAVG00000009574	-	99	38.621	ENSCSAVG00000009739	-	63	38.621
ENSCSAVG00000009574	-	99	51.111	ENSCSAVG00000001830	-	99	51.111
ENSCSAVG00000009574	-	99	47.426	ENSCSAVG00000001834	-	100	45.497
ENSCSAVG00000009574	-	99	47.647	ENSCSAVG00000000673	-	99	47.647
ENSCSAVG00000009574	-	99	52.525	ENSCSAVG00000000655	-	99	52.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009574	-	99	45.902	ENSACIG00000017166	-	74	45.902	Amphilophus_citrinellus
ENSCSAVG00000009574	-	99	47.297	ENSAOCG00000018579	-	82	41.935	Amphiprion_ocellaris
ENSCSAVG00000009574	-	100	37.037	ENSAPEG00000007910	-	52	39.200	Amphiprion_percula
ENSCSAVG00000009574	-	99	36.279	ENSAPEG00000007889	-	90	36.279	Amphiprion_percula
ENSCSAVG00000009574	-	99	41.739	ENSAPEG00000019755	-	99	36.424	Amphiprion_percula
ENSCSAVG00000009574	-	97	42.697	ENSAMXG00000032845	-	56	40.909	Astyanax_mexicanus
ENSCSAVG00000009574	-	100	33.846	WBGene00021374	Y37E11B.1	91	34.677	Caenorhabditis_elegans
ENSCSAVG00000009574	-	98	30.247	ENSCING00000003384	-	95	33.333	Ciona_intestinalis
ENSCSAVG00000009574	-	99	35.652	ENSCING00000000529	zf(btb/c2h2)	59	35.652	Ciona_intestinalis
ENSCSAVG00000009574	-	98	37.234	ENSCING00000004861	zf(c2h2)-12	78	37.234	Ciona_intestinalis
ENSCSAVG00000009574	-	100	35.971	ENSCING00000005713	-	82	35.971	Ciona_intestinalis
ENSCSAVG00000009574	-	99	35.821	ENSCSEG00000005491	-	93	35.821	Cynoglossus_semilaevis
ENSCSAVG00000009574	-	99	41.259	ENSCVAG00000016098	-	99	41.259	Cyprinodon_variegatus
ENSCSAVG00000009574	-	98	33.333	ENSCVAG00000002502	-	99	33.721	Cyprinodon_variegatus
ENSCSAVG00000009574	-	99	35.043	ENSCVAG00000019574	-	87	35.043	Cyprinodon_variegatus
ENSCSAVG00000009574	-	100	35.987	ENSCVAG00000002295	-	83	33.000	Cyprinodon_variegatus
ENSCSAVG00000009574	-	99	35.484	ENSDARG00000012642	si:ch211-266d19.4	97	35.648	Danio_rerio
ENSCSAVG00000009574	-	100	31.469	FBgn0040366	CG11398	70	31.469	Drosophila_melanogaster
ENSCSAVG00000009574	-	97	45.679	FBgn0037722	CG8319	71	40.517	Drosophila_melanogaster
ENSCSAVG00000009574	-	100	37.143	FBgn0030012	CG18262	55	37.607	Drosophila_melanogaster
ENSCSAVG00000009574	-	99	41.379	FBgn0033934	CG17385	90	35.211	Drosophila_melanogaster
ENSCSAVG00000009574	-	99	40.000	FBgn0028895	CG17328	55	40.000	Drosophila_melanogaster
ENSCSAVG00000009574	-	99	44.316	ENSEBUG00000015522	-	75	44.316	Eptatretus_burgeri
ENSCSAVG00000009574	-	99	49.167	ENSEBUG00000008392	-	76	49.167	Eptatretus_burgeri
ENSCSAVG00000009574	-	100	43.434	ENSEBUG00000004841	-	83	43.434	Eptatretus_burgeri
ENSCSAVG00000009574	-	99	43.619	ENSEBUG00000000735	-	98	43.619	Eptatretus_burgeri
ENSCSAVG00000009574	-	99	42.353	ENSELUG00000010454	-	75	42.353	Esox_lucius
ENSCSAVG00000009574	-	99	42.056	ENSELUG00000020794	-	65	42.056	Esox_lucius
ENSCSAVG00000009574	-	100	41.379	ENSFHEG00000012990	-	96	37.963	Fundulus_heteroclitus
ENSCSAVG00000009574	-	99	44.186	ENSFHEG00000013644	-	78	39.918	Fundulus_heteroclitus
ENSCSAVG00000009574	-	100	37.118	ENSFHEG00000003596	-	77	35.217	Fundulus_heteroclitus
ENSCSAVG00000009574	-	99	36.538	ENSFHEG00000007344	-	58	38.462	Fundulus_heteroclitus
ENSCSAVG00000009574	-	100	40.828	ENSFHEG00000020889	-	74	40.828	Fundulus_heteroclitus
ENSCSAVG00000009574	-	99	40.517	ENSGACG00000018415	-	99	43.564	Gasterosteus_aculeatus
ENSCSAVG00000009574	-	99	38.679	ENSHCOG00000001313	-	72	38.583	Hippocampus_comes
ENSCSAVG00000009574	-	99	32.323	ENSHCOG00000014891	-	50	32.323	Hippocampus_comes
ENSCSAVG00000009574	-	99	32.824	ENSHCOG00000008181	-	74	32.824	Hippocampus_comes
ENSCSAVG00000009574	-	99	31.100	ENSHCOG00000014887	-	77	31.100	Hippocampus_comes
ENSCSAVG00000009574	-	100	39.310	ENSHCOG00000014881	-	71	39.310	Hippocampus_comes
ENSCSAVG00000009574	-	99	38.849	ENSHCOG00000017437	-	73	38.849	Hippocampus_comes
ENSCSAVG00000009574	-	99	37.931	ENSIPUG00000009727	-	50	37.037	Ictalurus_punctatus
ENSCSAVG00000009574	-	99	33.094	ENSIPUG00000002510	-	62	33.094	Ictalurus_punctatus
ENSCSAVG00000009574	-	99	35.802	ENSIPUG00000013526	-	99	35.802	Ictalurus_punctatus
ENSCSAVG00000009574	-	100	41.317	ENSKMAG00000007658	-	97	41.489	Kryptolebias_marmoratus
ENSCSAVG00000009574	-	100	40.860	ENSKMAG00000012909	-	96	42.400	Kryptolebias_marmoratus
ENSCSAVG00000009574	-	99	39.506	ENSKMAG00000011202	-	60	38.172	Kryptolebias_marmoratus
ENSCSAVG00000009574	-	98	40.506	ENSLBEG00000026573	-	69	40.506	Labrus_bergylta
ENSCSAVG00000009574	-	96	33.000	ENSMMOG00000001961	-	99	35.616	Mola_mola
ENSCSAVG00000009574	-	99	34.884	ENSMALG00000013521	-	88	34.559	Monopterus_albus
ENSCSAVG00000009574	-	99	37.931	ENSMALG00000000650	-	80	37.931	Monopterus_albus
ENSCSAVG00000009574	-	99	45.000	ENSONIG00000003471	-	98	45.000	Oreochromis_niloticus
ENSCSAVG00000009574	-	99	36.564	ENSONIG00000003224	-	99	35.827	Oreochromis_niloticus
ENSCSAVG00000009574	-	99	40.230	ENSONIG00000009894	-	100	40.230	Oreochromis_niloticus
ENSCSAVG00000009574	-	100	40.179	ENSONIG00000016416	-	99	40.179	Oreochromis_niloticus
ENSCSAVG00000009574	-	99	43.210	ENSONIG00000007812	-	100	38.191	Oreochromis_niloticus
ENSCSAVG00000009574	-	100	35.880	ENSORLG00015018254	-	94	35.016	Oryzias_latipes_hsok
ENSCSAVG00000009574	-	99	39.720	ENSOMEG00000017673	-	84	39.568	Oryzias_melastigma
ENSCSAVG00000009574	-	99	35.915	ENSPMGG00000000218	-	62	36.957	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	97	49.057	ENSPMGG00000019842	-	73	49.057	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	99	39.007	ENSPMGG00000000489	-	84	39.007	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	99	37.443	ENSPMGG00000000243	-	87	33.101	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	99	41.071	ENSPMGG00000000458	-	97	39.286	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	99	31.613	ENSPMGG00000010563	-	77	30.898	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	100	36.527	ENSPMGG00000010664	-	91	36.527	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	100	33.333	ENSPMGG00000012289	-	74	32.039	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	99	43.750	ENSPMGG00000022524	-	98	46.341	Periophthalmus_magnuspinnatus
ENSCSAVG00000009574	-	100	31.892	ENSPMAG00000007983	-	99	31.415	Petromyzon_marinus
ENSCSAVG00000009574	-	99	38.650	ENSPFOG00000020691	-	93	36.098	Poecilia_formosa
ENSCSAVG00000009574	-	99	40.000	ENSPFOG00000002879	-	100	39.302	Poecilia_formosa
ENSCSAVG00000009574	-	100	37.013	ENSPLAG00000006174	-	76	36.134	Poecilia_latipinna
ENSCSAVG00000009574	-	99	37.956	ENSPLAG00000011254	-	59	43.373	Poecilia_latipinna
ENSCSAVG00000009574	-	99	35.057	ENSPMEG00000021927	-	56	35.057	Poecilia_mexicana
ENSCSAVG00000009574	-	99	38.686	ENSPMEG00000007503	-	64	43.373	Poecilia_mexicana
ENSCSAVG00000009574	-	99	34.981	ENSPMEG00000019229	-	67	34.231	Poecilia_mexicana
ENSCSAVG00000009574	-	99	38.728	ENSPMEG00000022676	-	100	38.194	Poecilia_mexicana
ENSCSAVG00000009574	-	100	35.484	ENSPREG00000016204	-	72	35.507	Poecilia_reticulata
ENSCSAVG00000009574	-	100	35.361	ENSPREG00000007146	-	66	36.869	Poecilia_reticulata
ENSCSAVG00000009574	-	99	38.686	ENSPREG00000015352	-	66	38.686	Poecilia_reticulata
ENSCSAVG00000009574	-	100	35.519	ENSPNAG00000025211	-	81	30.546	Pygocentrus_nattereri
ENSCSAVG00000009574	-	99	33.571	ENSSMAG00000001359	-	88	33.571	Scophthalmus_maximus
ENSCSAVG00000009574	-	99	37.719	ENSSMAG00000000404	-	88	37.719	Scophthalmus_maximus
ENSCSAVG00000009574	-	98	35.345	ENSSDUG00000000871	-	94	35.345	Seriola_dumerili
ENSCSAVG00000009574	-	99	43.931	ENSSDUG00000000946	-	94	43.931	Seriola_dumerili
ENSCSAVG00000009574	-	99	34.783	ENSSLDG00000000464	-	73	34.783	Seriola_lalandi_dorsalis
ENSCSAVG00000009574	-	99	45.312	ENSSLDG00000002515	-	86	39.560	Seriola_lalandi_dorsalis
ENSCSAVG00000009574	-	100	32.800	ENSSLDG00000015796	-	70	32.800	Seriola_lalandi_dorsalis
ENSCSAVG00000009574	-	99	38.854	ENSSPAG00000009405	-	62	38.854	Stegastes_partitus
ENSCSAVG00000009574	-	99	37.220	ENSTNIG00000008154	-	99	37.220	Tetraodon_nigroviridis
ENSCSAVG00000009574	-	99	38.202	ENSXCOG00000005697	-	99	38.202	Xiphophorus_couchianus
ENSCSAVG00000009574	-	99	37.931	ENSXMAG00000022242	-	86	37.415	Xiphophorus_maculatus