EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000009583 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
1699 bases
Position
chrreftig_2:2966213-2967911
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82114
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82214
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82314
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82414
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82514
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82614
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82714
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82814
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-82914
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-821014
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-821114
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-821214
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-821314
ENSCSAVP00000016287zf-C2H2PF00096.262.3e-821414
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82114
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82214
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82314
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82414
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82514
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82614
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82714
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82814
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-82914
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-821014
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-821114
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-821214
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-821314
ENSCSAVP00000016286zf-C2H2PF00096.265.1e-821414
ENSCSAVP00000016287zf-metPF12874.74.2e-3218
ENSCSAVP00000016287zf-metPF12874.74.2e-3228
ENSCSAVP00000016287zf-metPF12874.74.2e-3238
ENSCSAVP00000016287zf-metPF12874.74.2e-3248
ENSCSAVP00000016287zf-metPF12874.74.2e-3258
ENSCSAVP00000016287zf-metPF12874.74.2e-3268
ENSCSAVP00000016287zf-metPF12874.74.2e-3278
ENSCSAVP00000016287zf-metPF12874.74.2e-3288
ENSCSAVP00000016286zf-metPF12874.71.1e-3018
ENSCSAVP00000016286zf-metPF12874.71.1e-3028
ENSCSAVP00000016286zf-metPF12874.71.1e-3038
ENSCSAVP00000016286zf-metPF12874.71.1e-3048
ENSCSAVP00000016286zf-metPF12874.71.1e-3058
ENSCSAVP00000016286zf-metPF12874.71.1e-3068
ENSCSAVP00000016286zf-metPF12874.71.1e-3078
ENSCSAVP00000016286zf-metPF12874.71.1e-3088
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000016468-1440-ENSCSAVP00000016287480 (aa)-H2ZFC1
ENSCSAVT00000016467-1590-ENSCSAVP00000016286530 (aa)-H2ZFC0
Gene Model
Click here to download ENSCSAVG00000009583's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009583's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000009583-9835.652ENSCSAVG00000006745-9934.375
ENSCSAVG00000009583-10063.291ENSCSAVG00000007918-10065.021
ENSCSAVG00000009583-10076.571ENSCSAVG00000004762-10076.571
ENSCSAVG00000009583-10048.182ENSCSAVG00000003895-10048.649
ENSCSAVG00000009583-9940.426ENSCSAVG00000006028-7840.426
ENSCSAVG00000009583-9937.500ENSCSAVG00000009819-7837.500
ENSCSAVG00000009583-10062.201ENSCSAVG00000004703-10064.444
ENSCSAVG00000009583-10034.450ENSCSAVG00000005896-7034.450
ENSCSAVG00000009583-10056.410ENSCSAVG00000006608-10053.374
ENSCSAVG00000009583-9978.788ENSCSAVG00000004499-10076.305
ENSCSAVG00000009583-10061.039ENSCSAVG00000000293-9965.909
ENSCSAVG00000009583-9961.947ENSCSAVG00000002179-10058.599
ENSCSAVG00000009583-9964.516ENSCSAVG00000003690-10062.857
ENSCSAVG00000009583-9867.407ENSCSAVG00000001830-10065.487
ENSCSAVG00000009583-10061.191ENSCSAVG00000001834-10062.004
ENSCSAVG00000009583-9947.312ENSCSAVG00000011146-9347.312
ENSCSAVG00000009583-9951.754ENSCSAVG00000010156-9951.754
ENSCSAVG00000009583-10036.364ENSCSAVG00000009217-9936.364
ENSCSAVG00000009583-9941.441ENSCSAVG00000005904-9741.441
ENSCSAVG00000009583-10054.177ENSCSAVG00000006141-10054.603
ENSCSAVG00000009583-9959.792ENSCSAVG00000000649-9959.615
ENSCSAVG00000009583-10064.238ENSCSAVG00000000642-10064.815
ENSCSAVG00000009583-10044.419ENSCSAVG00000009574-9944.186
ENSCSAVG00000009583-10035.088ENSCSAVG00000006729-6935.088
ENSCSAVG00000009583-9967.500ENSCSAVG00000008862-9967.500
ENSCSAVG00000009583-9960.153ENSCSAVG00000010960-10057.143
ENSCSAVG00000009583-10066.667ENSCSAVG00000000655-9870.455
ENSCSAVG00000009583-9940.000ENSCSAVG00000001949-9940.000
ENSCSAVG00000009583-10047.264ENSCSAVG00000004678-9946.585
ENSCSAVG00000009583-10057.143ENSCSAVG00000000520-10057.143
ENSCSAVG00000009583-9842.857ENSCSAVG00000004543-9937.931
ENSCSAVG00000009583-9939.726ENSCSAVG00000009739-6139.726
ENSCSAVG00000009583-10052.529ENSCSAVG00000007589-10052.703
ENSCSAVG00000009583-10059.878ENSCSAVG00000001989-10059.877
ENSCSAVG00000009583-10040.741ENSCSAVG00000006650-9841.206
ENSCSAVG00000009583-10058.750ENSCSAVG00000001808-10063.462
ENSCSAVG00000009583-10063.704ENSCSAVG00000000690-9863.704
ENSCSAVG00000009583-10070.565ENSCSAVG00000009953-9770.297
ENSCSAVG00000009583-10059.073ENSCSAVG00000000673-10059.073
ENSCSAVG00000009583-9838.532ENSCSAVG00000011749-7338.532
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000009583-10046.862ENSG00000198482ZNF8089248.077Homo_sapiens
ENSCSAVG00000009583-10048.033ENSAMEG00000014454-10048.033Ailuropoda_melanoleuca
ENSCSAVG00000009583-10048.936ENSACIG00000015429-8148.936Amphilophus_citrinellus
ENSCSAVG00000009583-10040.038ENSACAG00000025611-6840.038Anolis_carolinensis
ENSCSAVG00000009583-10049.807ENSACAG00000029487-7449.807Anolis_carolinensis
ENSCSAVG00000009583-10046.281ENSACAG00000013039-9946.538Anolis_carolinensis
ENSCSAVG00000009583-9949.627ENSACLG00000017576-8950.365Astatotilapia_calliptera
ENSCSAVG00000009583-9950.000ENSACLG00000019318-9945.752Astatotilapia_calliptera
ENSCSAVG00000009583-10054.381ENSAMXG00000038280-8954.381Astyanax_mexicanus
ENSCSAVG00000009583-10051.383ENSAMXG00000042938-9051.661Astyanax_mexicanus
ENSCSAVG00000009583-9950.732ENSAMXG00000037717-9550.732Astyanax_mexicanus
ENSCSAVG00000009583-10055.676ENSAMXG00000031496-8854.902Astyanax_mexicanus
ENSCSAVG00000009583-10051.074ENSAMXG00000009563-9450.676Astyanax_mexicanus
ENSCSAVG00000009583-10047.619ENSAMXG00000012604-9847.702Astyanax_mexicanus
ENSCSAVG00000009583-9954.493ENSAMXG00000033500-9754.308Astyanax_mexicanus
ENSCSAVG00000009583-9952.727ENSAMXG00000030530-9852.727Astyanax_mexicanus
ENSCSAVG00000009583-9955.556ENSAMXG00000041861-8755.556Astyanax_mexicanus
ENSCSAVG00000009583-10053.684ENSAMXG00000041721-8054.011Astyanax_mexicanus
ENSCSAVG00000009583-9952.778ENSAMXG00000031900-9451.198Astyanax_mexicanus
ENSCSAVG00000009583-10059.073ENSAMXG00000036762-9659.073Astyanax_mexicanus
ENSCSAVG00000009583-9954.496ENSAMXG00000029828-9954.425Astyanax_mexicanus
ENSCSAVG00000009583-9959.172ENSAMXG00000025965-9459.172Astyanax_mexicanus
ENSCSAVG00000009583-9959.922ENSAMXG00000018161-9460.068Astyanax_mexicanus
ENSCSAVG00000009583-10048.263ENSBTAG00000050322-7448.263Bos_taurus
ENSCSAVG00000009583-9847.312ENSBTAG00000030470-7045.594Bos_taurus
ENSCSAVG00000009583-10047.835ENSCHIG00000020931-8247.835Capra_hircus
ENSCSAVG00000009583-10047.119ENSCATG00000036940ZNF8088550.847Cercocebus_atys
ENSCSAVG00000009583-10047.216ENSCSAG00000001974ZNF8089049.153Chlorocebus_sabaeus
ENSCSAVG00000009583-9851.311ENSCPBG00000003774-9648.622Chrysemys_picta_bellii
ENSCSAVG00000009583-10049.505ENSCPBG00000015500-9448.077Chrysemys_picta_bellii
ENSCSAVG00000009583-10053.672ENSCPBG00000003130-9852.569Chrysemys_picta_bellii
ENSCSAVG00000009583-10045.396ENSCPBG00000017489-9444.748Chrysemys_picta_bellii
ENSCSAVG00000009583-10042.324ENSCING00000024509-9442.697Ciona_intestinalis
ENSCSAVG00000009583-10047.629ENSCANG00000019002ZNF8088547.500Colobus_angolensis_palliatus
ENSCSAVG00000009583-10045.055ENSCGRG00001011966Zfp7156545.433Cricetulus_griseus_chok1gshd
ENSCSAVG00000009583-10046.485ENSCGRG00001012523-9846.485Cricetulus_griseus_chok1gshd
ENSCSAVG00000009583-10045.055ENSCGRG00000013626Zfp7156245.433Cricetulus_griseus_crigri
ENSCSAVG00000009583-9939.098ENSEBUG00000006129-7939.098Eptatretus_burgeri
ENSCSAVG00000009583-10047.392ENSEBUG00000006249-9647.630Eptatretus_burgeri
ENSCSAVG00000009583-9838.772ENSEBUG00000003078-7037.854Eptatretus_burgeri
ENSCSAVG00000009583-10047.031ENSEBUG00000014597-8345.135Eptatretus_burgeri
ENSCSAVG00000009583-10053.552ENSEBUG00000008903-8153.552Eptatretus_burgeri
ENSCSAVG00000009583-10050.439ENSEBUG00000006987-9750.439Eptatretus_burgeri
ENSCSAVG00000009583-9945.489ENSEBUG00000005012-5946.025Eptatretus_burgeri
ENSCSAVG00000009583-10049.897ENSEBUG00000001972-7250.288Eptatretus_burgeri
ENSCSAVG00000009583-10050.000ENSEBUG00000005703-8650.980Eptatretus_burgeri
ENSCSAVG00000009583-10050.000ENSEBUG00000010472-7646.681Eptatretus_burgeri
ENSCSAVG00000009583-10048.087ENSEBUG00000009909-8148.087Eptatretus_burgeri
ENSCSAVG00000009583-9951.172ENSEBUG00000014648-7852.119Eptatretus_burgeri
ENSCSAVG00000009583-9951.351ENSEBUG00000003455-7651.351Eptatretus_burgeri
ENSCSAVG00000009583-9845.070ENSEBUG00000014542-7245.070Eptatretus_burgeri
ENSCSAVG00000009583-9940.708ENSGAFG00000017066-6440.708Gambusia_affinis
ENSCSAVG00000009583-9950.694ENSGAGG00000006323-9549.480Gopherus_agassizii
ENSCSAVG00000009583-10045.417ENSGAGG00000001469-9145.474Gopherus_agassizii
ENSCSAVG00000009583-10049.495ENSGAGG00000014389-9548.756Gopherus_agassizii
ENSCSAVG00000009583-10042.903ENSGAGG00000017094-5342.361Gopherus_agassizii
ENSCSAVG00000009583-9950.763ENSGAGG00000002828-8250.336Gopherus_agassizii
ENSCSAVG00000009583-10048.261ENSGGOG00000003352ZNF8089148.261Gorilla_gorilla
ENSCSAVG00000009583-9947.980ENSHBUG00000001075-9744.649Haplochromis_burtoni
ENSCSAVG00000009583-10047.541ENSLACG00000014708-7547.541Latimeria_chalumnae
ENSCSAVG00000009583-10046.914ENSMFAG00000007422ZNF8088750.847Macaca_fascicularis
ENSCSAVG00000009583-10046.914ENSMMUG00000012083ZNF8088250.847Macaca_mulatta
ENSCSAVG00000009583-10046.914ENSMNEG00000043562ZNF8088250.847Macaca_nemestrina
ENSCSAVG00000009583-10048.634ENSMLEG00000038043ZNF8089447.433Mandrillus_leucophaeus
ENSCSAVG00000009583-9953.205ENSMZEG00005021865-9350.617Maylandia_zebra
ENSCSAVG00000009583-9850.000ENSMZEG00005025012-9948.276Maylandia_zebra
ENSCSAVG00000009583-9853.819ENSMICG00000042544-8251.475Microcebus_murinus
ENSCSAVG00000009583-9949.563ENSMODG00000018622-9849.563Monodelphis_domestica
ENSCSAVG00000009583-10049.170MGP_CAROLIEiJ_G0029490Zfp4209849.423Mus_caroli
ENSCSAVG00000009583-10041.856MGP_CAROLIEiJ_G0029427-9240.840Mus_caroli
ENSCSAVG00000009583-9953.652MGP_CAROLIEiJ_G0021128Zfp518752.304Mus_caroli
ENSCSAVG00000009583-10046.667MGP_CAROLIEiJ_G0029614Zfp7156245.333Mus_caroli
ENSCSAVG00000009583-10049.582ENSMUSG00000058402Zfp4209849.615Mus_musculus
ENSCSAVG00000009583-10049.177ENSMUSG00000023892Zfp518749.177Mus_musculus
ENSCSAVG00000009583-10040.909ENSMUSG00000070709Zfp9748840.971Mus_musculus
ENSCSAVG00000009583-10046.897ENSMUSG00000012640Zfp7156245.556Mus_musculus
ENSCSAVG00000009583-10040.899MGP_PahariEiJ_G0012663-7741.031Mus_pahari
ENSCSAVG00000009583-10049.794MGP_PahariEiJ_G0023447Zfp518750.000Mus_pahari
ENSCSAVG00000009583-10049.170MGP_PahariEiJ_G0012724Zfp4209849.231Mus_pahari
ENSCSAVG00000009583-10049.582MGP_SPRETEiJ_G0030586Zfp4209849.615Mus_spretus
ENSCSAVG00000009583-10041.299MGP_SPRETEiJ_G0030525-8242.162Mus_spretus
ENSCSAVG00000009583-10042.073MGP_SPRETEiJ_G0030526-8642.485Mus_spretus
ENSCSAVG00000009583-10046.897MGP_SPRETEiJ_G0030713Zfp7156245.556Mus_spretus
ENSCSAVG00000009583-10046.389ENSMLUG00000015757-9647.025Myotis_lucifugus
ENSCSAVG00000009583-9944.615ENSMLUG00000009276-8744.615Myotis_lucifugus
ENSCSAVG00000009583-10047.826ENSNLEG00000006042ZNF8087647.860Nomascus_leucogenys
ENSCSAVG00000009583-9945.763ENSONIG00000007396-9945.429Oreochromis_niloticus
ENSCSAVG00000009583-10046.373ENSONIG00000016979-9646.373Oreochromis_niloticus
ENSCSAVG00000009583-9851.084ENSORLG00000011040-8651.084Oryzias_latipes
ENSCSAVG00000009583-9940.793ENSOMEG00000018871-6740.237Oryzias_melastigma
ENSCSAVG00000009583-10045.946ENSOMEG00000001622-9045.946Oryzias_melastigma
ENSCSAVG00000009583-10044.685ENSOARG00000002896-9144.273Ovis_aries
ENSCSAVG00000009583-10048.261ENSPPAG00000038086ZNF8088548.261Pan_paniscus
ENSCSAVG00000009583-9950.847ENSPANG00000011361ZNF8088850.847Papio_anubis
ENSCSAVG00000009583-10048.537ENSPSIG00000009603-9849.015Pelodiscus_sinensis
ENSCSAVG00000009583-10040.664ENSPSIG00000008588-10041.794Pelodiscus_sinensis
ENSCSAVG00000009583-9950.891ENSPEMG00000000548-9150.523Peromyscus_maniculatus_bairdii
ENSCSAVG00000009583-9948.916ENSPCIG00000018929-9745.155Phascolarctos_cinereus
ENSCSAVG00000009583-10044.444ENSPLAG00000014660-8444.550Poecilia_latipinna
ENSCSAVG00000009583-9935.799ENSPREG00000008826-9340.000Poecilia_reticulata
ENSCSAVG00000009583-10048.696ENSPPYG00000029644ZNF8088548.837Pongo_abelii
ENSCSAVG00000009583-9949.162ENSPVAG00000009433-9947.532Pteropus_vampyrus
ENSCSAVG00000009583-10052.371ENSPNAG00000016478-9953.269Pygocentrus_nattereri
ENSCSAVG00000009583-9854.331ENSPNAG00000012495-8154.331Pygocentrus_nattereri
ENSCSAVG00000009583-10053.786ENSPNAG00000021831-9652.590Pygocentrus_nattereri
ENSCSAVG00000009583-10051.042ENSPNAG00000002244-8451.042Pygocentrus_nattereri
ENSCSAVG00000009583-9853.873ENSPNAG00000005829-9750.741Pygocentrus_nattereri
ENSCSAVG00000009583-9854.605ENSPNAG00000012154-9051.711Pygocentrus_nattereri
ENSCSAVG00000009583-10049.868ENSPNAG00000006039-9549.868Pygocentrus_nattereri
ENSCSAVG00000009583-9951.923ENSRNOG00000043341Zfp519649.903Rattus_norvegicus
ENSCSAVG00000009583-10051.230ENSRBIG00000032168-8251.243Rhinopithecus_bieti
ENSCSAVG00000009583-9946.923ENSRROG00000009467ZNF8089547.629Rhinopithecus_roxellana
ENSCSAVG00000009583-10045.643ENSSHAG00000003090-8447.619Sarcophilus_harrisii
ENSCSAVG00000009583-9941.447ENSSLDG00000016301-8939.872Seriola_lalandi_dorsalis
ENSCSAVG00000009583-10046.824ENSSPUG00000000136-9946.795Sphenodon_punctatus
ENSCSAVG00000009583-9754.286ENSSPUG00000009898-9545.963Sphenodon_punctatus
ENSCSAVG00000009583-10046.594ENSSPUG00000009764-6045.861Sphenodon_punctatus
ENSCSAVG00000009583-10049.070ENSSPUG00000018867-9446.458Sphenodon_punctatus
ENSCSAVG00000009583-10048.496ENSSPUG00000000229-9651.613Sphenodon_punctatus
ENSCSAVG00000009583-10044.469ENSTGUG00000014079-10044.469Taeniopygia_guttata
ENSCSAVG00000009583-10047.541ENSTNIG00000005023-9943.820Tetraodon_nigroviridis
ENSCSAVG00000009583-9934.635ENSTNIG00000008100-9935.025Tetraodon_nigroviridis
ENSCSAVG00000009583-9944.978ENSTBEG00000016262-10044.978Tupaia_belangeri
ENSCSAVG00000009583-9850.877ENSUMAG00000024602-9846.897Ursus_maritimus
ENSCSAVG00000009583-10046.584ENSXETG00000016781-10049.412Xenopus_tropicalis

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