EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009604 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3283 bases
Position: chrreftig_0:2152876-2156158
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016320	Ribosomal_L37	PF08561.10	4.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016501	-	601	-	ENSCSAVP00000016320	145 (aa)	-	H2ZFF4

Gene Model

Click here to download ENSCSAVG00000009604's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009604's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009604	-	73	38.318	ENSG00000183617	MRPL54	77	38.318	Homo_sapiens
ENSCSAVG00000009604	-	66	35.417	ENSAPOG00000022643	mrpl54	70	35.417	Acanthochromis_polyacanthus
ENSCSAVG00000009604	-	73	36.792	ENSAMEG00000005908	MRPL54	77	36.792	Ailuropoda_melanoleuca
ENSCSAVG00000009604	-	59	38.824	ENSACIG00000006438	mrpl54	82	33.913	Amphilophus_citrinellus
ENSCSAVG00000009604	-	57	38.554	ENSAOCG00000006430	mrpl54	73	37.500	Amphiprion_ocellaris
ENSCSAVG00000009604	-	57	38.554	ENSAPEG00000023406	mrpl54	73	37.500	Amphiprion_percula
ENSCSAVG00000009604	-	55	37.500	ENSATEG00000004969	mrpl54	72	34.653	Anabas_testudineus
ENSCSAVG00000009604	-	73	41.509	ENSACAG00000017747	-	96	41.509	Anolis_carolinensis
ENSCSAVG00000009604	-	73	36.449	ENSANAG00000028692	MRPL54	77	36.449	Aotus_nancymaae
ENSCSAVG00000009604	-	59	36.471	ENSACLG00000001877	mrpl54	67	35.484	Astatotilapia_calliptera
ENSCSAVG00000009604	-	58	38.095	ENSAMXG00000018143	mrpl54	74	37.736	Astyanax_mexicanus
ENSCSAVG00000009604	-	73	35.849	ENSBTAG00000008396	MRPL54	77	38.889	Bos_taurus
ENSCSAVG00000009604	-	80	32.500	WBGene00009128	mrpl-54	84	33.884	Caenorhabditis_elegans
ENSCSAVG00000009604	-	73	36.449	ENSCJAG00000014998	MRPL54	77	36.449	Callithrix_jacchus
ENSCSAVG00000009604	-	73	34.906	ENSCAFG00000019192	MRPL54	77	34.906	Canis_familiaris
ENSCSAVG00000009604	-	73	34.906	ENSCAFG00020018333	MRPL54	77	34.906	Canis_lupus_dingo
ENSCSAVG00000009604	-	73	35.849	ENSCHIG00000026538	MRPL54	77	37.383	Capra_hircus
ENSCSAVG00000009604	-	64	41.053	ENSCAPG00000012166	MRPL54	100	41.053	Cavia_aperea
ENSCSAVG00000009604	-	73	37.736	ENSCPOG00000031082	MRPL54	77	37.736	Cavia_porcellus
ENSCSAVG00000009604	-	73	35.514	ENSCCAG00000000138	MRPL54	77	35.514	Cebus_capucinus
ENSCSAVG00000009604	-	76	39.640	ENSCATG00000014066	MRPL54	78	39.640	Cercocebus_atys
ENSCSAVG00000009604	-	73	38.679	ENSCLAG00000007908	MRPL54	76	38.679	Chinchilla_lanigera
ENSCSAVG00000009604	-	76	39.640	ENSCSAG00000010950	MRPL54	78	39.640	Chlorocebus_sabaeus
ENSCSAVG00000009604	-	72	38.095	ENSCPBG00000017103	MRPL54	59	38.095	Chrysemys_picta_bellii
ENSCSAVG00000009604	-	99	74.306	ENSCING00000019896	-	100	74.306	Ciona_intestinalis
ENSCSAVG00000009604	-	76	38.739	ENSCANG00000027841	MRPL54	78	38.739	Colobus_angolensis_palliatus
ENSCSAVG00000009604	-	75	35.780	ENSCGRG00001019482	Mrpl54	77	35.780	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009604	-	75	35.780	ENSCGRG00000010923	Mrpl54	77	35.780	Cricetulus_griseus_crigri
ENSCSAVG00000009604	-	55	38.750	ENSCSEG00000019883	mrpl54	69	37.736	Cynoglossus_semilaevis
ENSCSAVG00000009604	-	79	38.261	ENSCVAG00000002210	mrpl54	81	38.261	Cyprinodon_variegatus
ENSCSAVG00000009604	-	79	35.652	ENSDARG00000071468	mrpl54	81	35.652	Danio_rerio
ENSCSAVG00000009604	-	58	36.905	ENSDNOG00000007387	MRPL54	77	35.849	Dasypus_novemcinctus
ENSCSAVG00000009604	-	75	36.697	ENSDORG00000005326	Mrpl54	82	36.697	Dipodomys_ordii
ENSCSAVG00000009604	-	73	41.121	ENSETEG00000017500	MRPL54	79	41.121	Echinops_telfairi
ENSCSAVG00000009604	-	50	44.444	ENSEBUG00000003179	mrpl54	62	44.444	Eptatretus_burgeri
ENSCSAVG00000009604	-	73	33.962	ENSEASG00005022283	MRPL54	77	37.383	Equus_asinus_asinus
ENSCSAVG00000009604	-	73	34.906	ENSECAG00000001515	MRPL54	77	38.318	Equus_caballus
ENSCSAVG00000009604	-	56	37.037	ENSELUG00000022358	mrpl54	67	35.484	Esox_lucius
ENSCSAVG00000009604	-	73	36.792	ENSFCAG00000007144	MRPL54	77	36.792	Felis_catus
ENSCSAVG00000009604	-	63	43.478	ENSFALG00000011660	MRPL54	85	43.478	Ficedula_albicollis
ENSCSAVG00000009604	-	73	36.792	ENSFDAG00000020803	MRPL54	77	36.792	Fukomys_damarensis
ENSCSAVG00000009604	-	57	42.169	ENSGALG00000027611	MRPL54	82	39.216	Gallus_gallus
ENSCSAVG00000009604	-	59	37.647	ENSGAFG00000016193	mrpl54	65	37.778	Gambusia_affinis
ENSCSAVG00000009604	-	63	41.304	ENSGAGG00000020238	MRPL54	72	41.304	Gopherus_agassizii
ENSCSAVG00000009604	-	70	38.835	ENSGGOG00000014722	MRPL54	74	38.835	Gorilla_gorilla
ENSCSAVG00000009604	-	59	36.471	ENSHBUG00000009028	mrpl54	53	36.667	Haplochromis_burtoni
ENSCSAVG00000009604	-	73	38.679	ENSHGLG00000006157	MRPL54	76	38.679	Heterocephalus_glaber_female
ENSCSAVG00000009604	-	73	38.679	ENSHGLG00100000788	MRPL54	76	38.679	Heterocephalus_glaber_male
ENSCSAVG00000009604	-	61	37.500	ENSHCOG00000000536	mrpl54	87	33.065	Hippocampus_comes
ENSCSAVG00000009604	-	59	40.000	ENSIPUG00000024854	mrpl54	80	35.965	Ictalurus_punctatus
ENSCSAVG00000009604	-	65	37.234	ENSSTOG00000022378	MRPL54	95	37.234	Ictidomys_tridecemlineatus
ENSCSAVG00000009604	-	70	39.216	ENSJJAG00000020405	Mrpl54	74	39.216	Jaculus_jaculus
ENSCSAVG00000009604	-	77	36.607	ENSKMAG00000022310	mrpl54	80	36.607	Kryptolebias_marmoratus
ENSCSAVG00000009604	-	64	39.785	ENSLBEG00000005935	mrpl54	68	39.785	Labrus_bergylta
ENSCSAVG00000009604	-	79	37.391	ENSLACG00000013912	MRPL54	84	37.391	Latimeria_chalumnae
ENSCSAVG00000009604	-	59	37.647	ENSLOCG00000003860	mrpl54	65	37.778	Lepisosteus_oculatus
ENSCSAVG00000009604	-	73	37.615	ENSLAFG00000029657	MRPL54	77	38.532	Loxodonta_africana
ENSCSAVG00000009604	-	76	39.640	ENSMFAG00000003311	MRPL54	78	39.640	Macaca_fascicularis
ENSCSAVG00000009604	-	76	39.640	ENSMMUG00000044080	MRPL54	78	39.640	Macaca_mulatta
ENSCSAVG00000009604	-	76	39.640	ENSMNEG00000039499	MRPL54	78	39.640	Macaca_nemestrina
ENSCSAVG00000009604	-	66	38.542	ENSMAMG00000003291	mrpl54	73	38.542	Mastacembelus_armatus
ENSCSAVG00000009604	-	59	36.471	ENSMZEG00005009023	mrpl54	53	36.667	Maylandia_zebra
ENSCSAVG00000009604	-	63	38.043	ENSMGAG00000000951	MRPL54	95	38.043	Meleagris_gallopavo
ENSCSAVG00000009604	-	75	36.697	ENSMAUG00000009543	Mrpl54	76	36.697	Mesocricetus_auratus
ENSCSAVG00000009604	-	58	39.286	ENSMICG00000034581	MRPL54	67	35.849	Microcebus_murinus
ENSCSAVG00000009604	-	70	35.294	ENSMOCG00000017895	Mrpl54	74	35.294	Microtus_ochrogaster
ENSCSAVG00000009604	-	81	31.967	ENSMMOG00000020370	mrpl54	94	31.967	Mola_mola
ENSCSAVG00000009604	-	70	37.255	ENSMODG00000000602	MRPL54	74	37.255	Monodelphis_domestica
ENSCSAVG00000009604	-	59	38.824	ENSMALG00000020280	mrpl54	82	33.333	Monopterus_albus
ENSCSAVG00000009604	-	58	36.905	MGP_CAROLIEiJ_G0015629	Mrpl54	78	34.286	Mus_caroli
ENSCSAVG00000009604	-	56	35.802	ENSMUSG00000034932	Mrpl54	81	34.483	Mus_musculus
ENSCSAVG00000009604	-	70	37.255	MGP_PahariEiJ_G0031042	Mrpl54	73	37.255	Mus_pahari
ENSCSAVG00000009604	-	58	36.905	MGP_SPRETEiJ_G0016447	Mrpl54	78	34.286	Mus_spretus
ENSCSAVG00000009604	-	58	40.476	ENSMLUG00000010801	MRPL54	100	36.792	Myotis_lucifugus
ENSCSAVG00000009604	-	73	32.710	ENSNGAG00000021044	Mrpl54	77	34.579	Nannospalax_galili
ENSCSAVG00000009604	-	61	36.364	ENSNBRG00000000568	mrpl54	67	36.559	Neolamprologus_brichardi
ENSCSAVG00000009604	-	70	40.196	ENSMEUG00000013033	MRPL54	75	40.196	Notamacropus_eugenii
ENSCSAVG00000009604	-	70	35.849	ENSOPRG00000010035	-	76	35.849	Ochotona_princeps
ENSCSAVG00000009604	-	73	35.849	ENSODEG00000013969	MRPL54	77	35.849	Octodon_degus
ENSCSAVG00000009604	-	59	36.471	ENSONIG00000002312	mrpl54	60	35.484	Oreochromis_niloticus
ENSCSAVG00000009604	-	64	39.785	ENSORLG00000016960	mrpl54	75	39.785	Oryzias_latipes
ENSCSAVG00000009604	-	66	38.542	ENSORLG00020014934	mrpl54	89	38.710	Oryzias_latipes_hni
ENSCSAVG00000009604	-	64	39.785	ENSORLG00015010788	mrpl54	73	39.785	Oryzias_latipes_hsok
ENSCSAVG00000009604	-	61	36.364	ENSOMEG00000009005	mrpl54	67	36.559	Oryzias_melastigma
ENSCSAVG00000009604	-	71	35.922	ENSOGAG00000026254	-	74	36.275	Otolemur_garnettii
ENSCSAVG00000009604	-	73	35.849	ENSOGAG00000033519	-	77	35.849	Otolemur_garnettii
ENSCSAVG00000009604	-	73	38.318	ENSPPAG00000042418	MRPL54	77	38.318	Pan_paniscus
ENSCSAVG00000009604	-	62	40.860	ENSPPRG00000012325	MRPL54	70	40.860	Panthera_pardus
ENSCSAVG00000009604	-	73	38.532	ENSPTIG00000017727	MRPL54	77	39.450	Panthera_tigris_altaica
ENSCSAVG00000009604	-	73	38.318	ENSPTRG00000010276	MRPL54	77	38.318	Pan_troglodytes
ENSCSAVG00000009604	-	76	39.640	ENSPANG00000033944	MRPL54	78	39.640	Papio_anubis
ENSCSAVG00000009604	-	72	32.381	ENSPKIG00000009984	mrpl54	60	32.381	Paramormyrops_kingsleyae
ENSCSAVG00000009604	-	64	41.935	ENSPSIG00000013587	MRPL54	98	41.935	Pelodiscus_sinensis
ENSCSAVG00000009604	-	61	38.636	ENSPMGG00000015972	mrpl54	61	38.710	Periophthalmus_magnuspinnatus
ENSCSAVG00000009604	-	68	37.500	ENSPEMG00000022929	Mrpl54	75	37.500	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009604	-	70	37.255	ENSPCIG00000025383	MRPL54	74	37.255	Phascolarctos_cinereus
ENSCSAVG00000009604	-	62	36.667	ENSPFOG00000007409	mrpl54	65	36.667	Poecilia_formosa
ENSCSAVG00000009604	-	62	36.667	ENSPLAG00000001640	mrpl54	65	36.667	Poecilia_latipinna
ENSCSAVG00000009604	-	62	36.667	ENSPLAG00000001633	mrpl54	65	36.667	Poecilia_latipinna
ENSCSAVG00000009604	-	62	36.667	ENSPMEG00000021078	mrpl54	65	36.667	Poecilia_mexicana
ENSCSAVG00000009604	-	62	36.667	ENSPMEG00000021068	mrpl54	65	36.667	Poecilia_mexicana
ENSCSAVG00000009604	-	64	36.559	ENSPREG00000012425	mrpl54	67	36.559	Poecilia_reticulata
ENSCSAVG00000009604	-	70	39.806	ENSPPYG00000009386	MRPL54	74	39.806	Pongo_abelii
ENSCSAVG00000009604	-	73	39.252	ENSPCAG00000000690	MRPL54	77	39.252	Procavia_capensis
ENSCSAVG00000009604	-	73	36.792	ENSPCOG00000027550	MRPL54	77	36.792	Propithecus_coquereli
ENSCSAVG00000009604	-	59	37.647	ENSPNYG00000022006	mrpl54	53	37.778	Pundamilia_nyererei
ENSCSAVG00000009604	-	58	39.286	ENSPNAG00000000077	mrpl54	81	35.345	Pygocentrus_nattereri
ENSCSAVG00000009604	-	70	37.255	ENSRNOG00000020464	Mrpl54	73	37.255	Rattus_norvegicus
ENSCSAVG00000009604	-	76	38.739	ENSRBIG00000027038	MRPL54	79	38.739	Rhinopithecus_bieti
ENSCSAVG00000009604	-	76	38.739	ENSRROG00000018776	MRPL54	79	38.739	Rhinopithecus_roxellana
ENSCSAVG00000009604	-	73	33.962	ENSSBOG00000028081	MRPL54	77	33.962	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009604	-	55	41.250	ENSSHAG00000002557	MRPL54	74	39.216	Sarcophilus_harrisii
ENSCSAVG00000009604	-	61	32.955	ENSSFOG00015008073	mrpl54	75	32.075	Scleropages_formosus
ENSCSAVG00000009604	-	61	39.773	ENSSMAG00000009226	mrpl54	75	37.736	Scophthalmus_maximus
ENSCSAVG00000009604	-	61	36.364	ENSSDUG00000009545	mrpl54	64	36.364	Seriola_dumerili
ENSCSAVG00000009604	-	61	38.636	ENSSLDG00000001781	mrpl54	64	38.636	Seriola_lalandi_dorsalis
ENSCSAVG00000009604	-	68	36.735	ENSSPUG00000015361	MRPL54	70	39.130	Sphenodon_punctatus
ENSCSAVG00000009604	-	69	31.000	ENSSPAG00000003775	-	70	31.000	Stegastes_partitus
ENSCSAVG00000009604	-	69	31.000	ENSSPAG00000015601	mrpl54	70	31.000	Stegastes_partitus
ENSCSAVG00000009604	-	73	37.736	ENSSSCG00000024242	MRPL54	77	39.252	Sus_scrofa
ENSCSAVG00000009604	-	61	37.500	ENSTRUG00000004609	mrpl54	70	36.458	Takifugu_rubripes
ENSCSAVG00000009604	-	61	36.364	ENSTNIG00000015468	mrpl54	70	35.417	Tetraodon_nigroviridis
ENSCSAVG00000009604	-	73	37.736	ENSTTRG00000004410	MRPL54	76	37.736	Tursiops_truncatus
ENSCSAVG00000009604	-	73	36.792	ENSUAMG00000021572	MRPL54	77	36.792	Ursus_americanus
ENSCSAVG00000009604	-	73	37.736	ENSUMAG00000007416	MRPL54	77	37.736	Ursus_maritimus
ENSCSAVG00000009604	-	73	34.906	ENSVVUG00000004420	MRPL54	77	34.906	Vulpes_vulpes
ENSCSAVG00000009604	-	70	34.314	ENSXETG00000033250	MRPL54	74	34.314	Xenopus_tropicalis
ENSCSAVG00000009604	-	59	41.176	ENSXMAG00000003500	mrpl54	65	41.111	Xiphophorus_maculatus