EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009618 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5104 bases
Position: chrreftig_0:2196797-2201900
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016338	Lactamase_B	PF00753.27	1.3e-12	1	1
ENSCSAVP00000016339	Lactamase_B	PF00753.27	2.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016520	-	881	-	ENSCSAVP00000016339	142 (aa)	-	H2ZFH3
ENSCSAVT00000016519	-	1003	-	ENSCSAVP00000016338	241 (aa)	-	H2ZFH2

Gene Model

Click here to download ENSCSAVG00000009618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009618	-	96	69.853	ENSCSAVG00000008516	-	84	64.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009618	-	98	64.029	ENSG00000105755	ETHE1	93	57.143	Homo_sapiens
ENSCSAVG00000009618	-	99	62.143	ENSAPOG00000023998	ethe1	78	59.565	Acanthochromis_polyacanthus
ENSCSAVG00000009618	-	98	64.029	ENSAMEG00000004309	ETHE1	97	57.576	Ailuropoda_melanoleuca
ENSCSAVG00000009618	-	98	64.029	ENSACIG00000001047	ethe1	86	60.714	Amphilophus_citrinellus
ENSCSAVG00000009618	-	85	66.667	ENSACIG00000000998	ethe1	70	61.735	Amphilophus_citrinellus
ENSCSAVG00000009618	-	99	62.143	ENSACIG00000001017	ethe1	97	59.211	Amphilophus_citrinellus
ENSCSAVG00000009618	-	99	63.571	ENSAOCG00000009669	ethe1	75	59.565	Amphiprion_ocellaris
ENSCSAVG00000009618	-	99	63.571	ENSAPEG00000003969	ethe1	78	59.565	Amphiprion_percula
ENSCSAVG00000009618	-	96	66.912	ENSATEG00000007692	ETHE1	95	63.229	Anabas_testudineus
ENSCSAVG00000009618	-	99	64.286	ENSATEG00000008035	ethe1	99	61.333	Anabas_testudineus
ENSCSAVG00000009618	-	94	61.940	ENSATEG00000007855	ethe1	84	59.906	Anabas_testudineus
ENSCSAVG00000009618	-	97	67.391	ENSATEG00000007964	ethe1	100	60.000	Anabas_testudineus
ENSCSAVG00000009618	-	97	62.319	ENSATEG00000007777	ethe1	77	60.000	Anabas_testudineus
ENSCSAVG00000009618	-	99	66.429	ENSACAG00000004321	ETHE1	91	62.241	Anolis_carolinensis
ENSCSAVG00000009618	-	98	64.029	ENSANAG00000033114	ETHE1	98	59.375	Aotus_nancymaae
ENSCSAVG00000009618	-	99	63.571	ENSACLG00000001644	ethe1	77	61.572	Astatotilapia_calliptera
ENSCSAVG00000009618	-	99	64.286	ENSAMXG00000037704	ethe1	94	50.446	Astyanax_mexicanus
ENSCSAVG00000009618	-	96	62.774	ENSBTAG00000004379	ETHE1	93	56.723	Bos_taurus
ENSCSAVG00000009618	-	96	61.765	WBGene00007886	ethe-1	95	61.062	Caenorhabditis_elegans
ENSCSAVG00000009618	-	98	62.590	ENSCJAG00000008394	-	95	56.962	Callithrix_jacchus
ENSCSAVG00000009618	-	98	61.972	ENSCJAG00000013606	-	93	56.846	Callithrix_jacchus
ENSCSAVG00000009618	-	98	64.029	ENSCAFG00000004755	ETHE1	93	56.723	Canis_familiaris
ENSCSAVG00000009618	-	98	64.029	ENSCAFG00020014000	ETHE1	93	56.723	Canis_lupus_dingo
ENSCSAVG00000009618	-	96	63.504	ENSCHIG00000013680	ETHE1	93	56.303	Capra_hircus
ENSCSAVG00000009618	-	96	65.693	ENSTSYG00000035197	ETHE1	88	58.929	Carlito_syrichta
ENSCSAVG00000009618	-	89	63.492	ENSCAPG00000011904	ETHE1	84	58.768	Cavia_aperea
ENSCSAVG00000009618	-	98	64.029	ENSCPOG00000000484	ETHE1	98	59.375	Cavia_porcellus
ENSCSAVG00000009618	-	98	64.029	ENSCCAG00000025485	ETHE1	93	57.143	Cebus_capucinus
ENSCSAVG00000009618	-	98	64.029	ENSCATG00000029420	ETHE1	93	57.563	Cercocebus_atys
ENSCSAVG00000009618	-	96	64.234	ENSCLAG00000001597	ETHE1	93	57.143	Chinchilla_lanigera
ENSCSAVG00000009618	-	98	64.029	ENSCSAG00000003404	ETHE1	93	57.563	Chlorocebus_sabaeus
ENSCSAVG00000009618	-	99	65.000	ENSCPBG00000013116	ETHE1	87	62.661	Chrysemys_picta_bellii
ENSCSAVG00000009618	-	96	67.883	ENSCING00000010790	-	90	68.116	Ciona_intestinalis
ENSCSAVG00000009618	-	99	82.857	ENSCING00000002699	-	99	78.903	Ciona_intestinalis
ENSCSAVG00000009618	-	98	64.029	ENSCANG00000037959	ETHE1	93	57.563	Colobus_angolensis_palliatus
ENSCSAVG00000009618	-	96	64.234	ENSCGRG00001000826	Ethe1	93	56.723	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009618	-	98	61.151	ENSCSEG00000012287	ethe1	92	58.929	Cynoglossus_semilaevis
ENSCSAVG00000009618	-	98	62.590	ENSCVAG00000015428	ETHE1	94	57.269	Cyprinodon_variegatus
ENSCSAVG00000009618	-	95	70.370	ENSCVAG00000015391	ethe1	86	62.667	Cyprinodon_variegatus
ENSCSAVG00000009618	-	95	69.630	ENSDARG00000005713	ethe1	84	61.864	Danio_rerio
ENSCSAVG00000009618	-	87	66.935	ENSDNOG00000010239	-	98	66.935	Dasypus_novemcinctus
ENSCSAVG00000009618	-	97	65.217	ENSDORG00000002169	Ethe1	93	59.641	Dipodomys_ordii
ENSCSAVG00000009618	-	97	60.145	FBgn0050022	CG30022	82	56.957	Drosophila_melanogaster
ENSCSAVG00000009618	-	98	48.201	ENSETEG00000009673	ETHE1	98	50.000	Echinops_telfairi
ENSCSAVG00000009618	-	98	64.748	ENSEASG00005013250	ETHE1	93	57.563	Equus_asinus_asinus
ENSCSAVG00000009618	-	98	64.748	ENSECAG00000010891	ETHE1	93	57.983	Equus_caballus
ENSCSAVG00000009618	-	89	66.667	ENSEEUG00000004210	-	98	66.667	Erinaceus_europaeus
ENSCSAVG00000009618	-	99	61.429	ENSELUG00000016303	ethe1	81	59.167	Esox_lucius
ENSCSAVG00000009618	-	98	64.029	ENSFCAG00000027744	ETHE1	93	56.723	Felis_catus
ENSCSAVG00000009618	-	97	64.493	ENSFDAG00000002222	ETHE1	95	57.806	Fukomys_damarensis
ENSCSAVG00000009618	-	98	62.590	ENSFHEG00000007931	ETHE1	77	57.642	Fundulus_heteroclitus
ENSCSAVG00000009618	-	89	63.492	ENSGMOG00000014903	ethe1	78	58.447	Gadus_morhua
ENSCSAVG00000009618	-	97	64.493	ENSGAFG00000010095	ethe1	97	61.135	Gambusia_affinis
ENSCSAVG00000009618	-	98	62.590	ENSGAFG00000010076	ethe1	97	57.143	Gambusia_affinis
ENSCSAVG00000009618	-	99	63.571	ENSGACG00000012528	ethe1	79	61.472	Gasterosteus_aculeatus
ENSCSAVG00000009618	-	99	62.857	ENSGAGG00000011637	ETHE1	87	60.944	Gopherus_agassizii
ENSCSAVG00000009618	-	80	53.608	ENSGGOG00000003960	ETHE1	89	53.608	Gorilla_gorilla
ENSCSAVG00000009618	-	99	63.571	ENSHBUG00000017833	ethe1	78	60.000	Haplochromis_burtoni
ENSCSAVG00000009618	-	98	64.029	ENSHGLG00000006665	ETHE1	93	57.563	Heterocephalus_glaber_female
ENSCSAVG00000009618	-	98	64.029	ENSHGLG00100006828	ETHE1	93	57.563	Heterocephalus_glaber_male
ENSCSAVG00000009618	-	98	62.590	ENSHCOG00000006738	ethe1	77	59.565	Hippocampus_comes
ENSCSAVG00000009618	-	99	64.286	ENSIPUG00000008948	ethe1	84	59.914	Ictalurus_punctatus
ENSCSAVG00000009618	-	98	62.590	ENSSTOG00000023958	ETHE1	93	55.882	Ictidomys_tridecemlineatus
ENSCSAVG00000009618	-	96	63.504	ENSJJAG00000013800	Ethe1	98	60.000	Jaculus_jaculus
ENSCSAVG00000009618	-	98	63.309	ENSKMAG00000019934	ethe1	88	60.444	Kryptolebias_marmoratus
ENSCSAVG00000009618	-	98	61.871	ENSLBEG00000024552	ethe1	78	58.190	Labrus_bergylta
ENSCSAVG00000009618	-	61	58.784	ENSLACG00000008551	ethe1	75	58.784	Latimeria_chalumnae
ENSCSAVG00000009618	-	99	66.429	ENSLOCG00000005717	ethe1	79	61.373	Lepisosteus_oculatus
ENSCSAVG00000009618	-	98	63.309	ENSLAFG00000012685	ETHE1	93	56.723	Loxodonta_africana
ENSCSAVG00000009618	-	98	64.029	ENSMFAG00000036993	ETHE1	93	57.563	Macaca_fascicularis
ENSCSAVG00000009618	-	98	64.029	ENSMMUG00000019264	ETHE1	93	57.563	Macaca_mulatta
ENSCSAVG00000009618	-	98	64.029	ENSMNEG00000039250	ETHE1	93	57.563	Macaca_nemestrina
ENSCSAVG00000009618	-	78	69.369	ENSMLEG00000030643	-	82	69.369	Mandrillus_leucophaeus
ENSCSAVG00000009618	-	99	67.857	ENSMAMG00000009123	ETHE1	78	61.739	Mastacembelus_armatus
ENSCSAVG00000009618	-	99	63.571	ENSMZEG00005007552	ethe1	78	60.000	Maylandia_zebra
ENSCSAVG00000009618	-	85	66.116	ENSMZEG00005007535	ethe1	80	60.190	Maylandia_zebra
ENSCSAVG00000009618	-	98	64.029	ENSMICG00000014648	ETHE1	91	57.576	Microcebus_murinus
ENSCSAVG00000009618	-	96	64.234	ENSMOCG00000006120	Ethe1	93	56.723	Microtus_ochrogaster
ENSCSAVG00000009618	-	98	62.590	ENSMMOG00000014454	ethe1	90	61.333	Mola_mola
ENSCSAVG00000009618	-	97	63.768	ENSMALG00000010423	ethe1	83	59.111	Monopterus_albus
ENSCSAVG00000009618	-	99	62.857	ENSMALG00000010451	ethe1	98	55.224	Monopterus_albus
ENSCSAVG00000009618	-	98	62.590	MGP_CAROLIEiJ_G0029342	Ethe1	93	57.143	Mus_caroli
ENSCSAVG00000009618	-	98	62.590	ENSMUSG00000064254	Ethe1	93	57.143	Mus_musculus
ENSCSAVG00000009618	-	96	43.777	MGP_PahariEiJ_G0021193	Ethe1	90	43.777	Mus_pahari
ENSCSAVG00000009618	-	98	62.590	MGP_SPRETEiJ_G0030436	Ethe1	93	57.143	Mus_spretus
ENSCSAVG00000009618	-	98	64.029	ENSMPUG00000006865	ETHE1	93	57.143	Mustela_putorius_furo
ENSCSAVG00000009618	-	98	63.309	ENSNGAG00000010635	Ethe1	93	56.723	Nannospalax_galili
ENSCSAVG00000009618	-	98	66.906	ENSNBRG00000011439	ethe1	84	59.746	Neolamprologus_brichardi
ENSCSAVG00000009618	-	90	60.938	ENSNBRG00000001559	-	93	57.576	Neolamprologus_brichardi
ENSCSAVG00000009618	-	98	64.029	ENSNLEG00000001395	ETHE1	93	57.563	Nomascus_leucogenys
ENSCSAVG00000009618	-	99	66.429	ENSMEUG00000014820	ETHE1	96	60.274	Notamacropus_eugenii
ENSCSAVG00000009618	-	89	64.286	ENSOPRG00000003231	-	95	57.333	Ochotona_princeps
ENSCSAVG00000009618	-	98	63.309	ENSODEG00000008887	ETHE1	93	57.143	Octodon_degus
ENSCSAVG00000009618	-	96	62.774	ENSORLG00000015211	ethe1	78	58.650	Oryzias_latipes
ENSCSAVG00000009618	-	96	62.774	ENSORLG00020017793	ethe1	78	58.650	Oryzias_latipes_hni
ENSCSAVG00000009618	-	96	62.774	ENSORLG00015002734	ethe1	78	58.650	Oryzias_latipes_hsok
ENSCSAVG00000009618	-	94	64.925	ENSOMEG00000021188	ethe1	79	59.914	Oryzias_melastigma
ENSCSAVG00000009618	-	98	64.029	ENSOGAG00000009504	ETHE1	91	58.442	Otolemur_garnettii
ENSCSAVG00000009618	-	96	64.234	ENSOARG00000008652	ETHE1	93	52.941	Ovis_aries
ENSCSAVG00000009618	-	98	51.799	ENSPPAG00000032831	ETHE1	93	50.000	Pan_paniscus
ENSCSAVG00000009618	-	100	63.380	ENSPPRG00000009903	ETHE1	93	56.723	Panthera_pardus
ENSCSAVG00000009618	-	98	64.029	ENSPTIG00000021901	ETHE1	93	58.407	Panthera_tigris_altaica
ENSCSAVG00000009618	-	98	64.029	ENSPTRG00000011082	ETHE1	93	57.143	Pan_troglodytes
ENSCSAVG00000009618	-	98	64.029	ENSPANG00000013980	ETHE1	93	57.563	Papio_anubis
ENSCSAVG00000009618	-	97	64.493	ENSPKIG00000023493	ethe1	82	60.000	Paramormyrops_kingsleyae
ENSCSAVG00000009618	-	98	66.187	ENSPMGG00000007528	-	90	62.882	Periophthalmus_magnuspinnatus
ENSCSAVG00000009618	-	94	67.910	ENSPMGG00000010684	ethe1	97	62.054	Periophthalmus_magnuspinnatus
ENSCSAVG00000009618	-	98	62.590	ENSPEMG00000023092	Ethe1	93	56.303	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009618	-	99	66.429	ENSPMAG00000004229	ethe1	89	61.062	Petromyzon_marinus
ENSCSAVG00000009618	-	99	64.286	ENSPCIG00000020851	-	89	56.118	Phascolarctos_cinereus
ENSCSAVG00000009618	-	99	65.000	ENSPLAG00000007257	ethe1	81	60.338	Poecilia_latipinna
ENSCSAVG00000009618	-	97	65.217	ENSPMEG00000010483	ethe1	97	62.445	Poecilia_mexicana
ENSCSAVG00000009618	-	98	64.029	ENSPMEG00000010476	ethe1	80	58.051	Poecilia_mexicana
ENSCSAVG00000009618	-	99	63.571	ENSPREG00000015603	ETHE1	78	60.435	Poecilia_reticulata
ENSCSAVG00000009618	-	98	63.309	ENSPPYG00000010061	ETHE1	93	57.143	Pongo_abelii
ENSCSAVG00000009618	-	98	48.201	ENSPCAG00000006491	ETHE1	93	46.639	Procavia_capensis
ENSCSAVG00000009618	-	77	55.080	ENSPCOG00000023403	ETHE1	72	55.080	Propithecus_coquereli
ENSCSAVG00000009618	-	98	64.029	ENSPVAG00000016887	ETHE1	93	56.723	Pteropus_vampyrus
ENSCSAVG00000009618	-	85	66.116	ENSPNYG00000013048	ETHE1	80	60.377	Pundamilia_nyererei
ENSCSAVG00000009618	-	98	64.029	ENSPNYG00000013000	ethe1	78	59.565	Pundamilia_nyererei
ENSCSAVG00000009618	-	95	65.926	ENSPNYG00000013029	ETHE1	98	59.740	Pundamilia_nyererei
ENSCSAVG00000009618	-	99	65.714	ENSPNAG00000004361	ethe1	89	60.593	Pygocentrus_nattereri
ENSCSAVG00000009618	-	98	62.590	ENSRNOG00000019982	Ethe1	93	55.882	Rattus_norvegicus
ENSCSAVG00000009618	-	98	64.029	ENSRBIG00000007569	ETHE1	93	57.563	Rhinopithecus_bieti
ENSCSAVG00000009618	-	98	63.309	ENSRROG00000028814	ETHE1	93	57.143	Rhinopithecus_roxellana
ENSCSAVG00000009618	-	98	46.043	ENSSBOG00000027526	ETHE1	88	48.000	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009618	-	92	67.692	ENSSHAG00000003558	-	78	67.692	Sarcophilus_harrisii
ENSCSAVG00000009618	-	99	65.714	ENSSFOG00015019848	ethe1	79	62.500	Scleropages_formosus
ENSCSAVG00000009618	-	99	62.143	ENSSMAG00000004866	ethe1	77	61.572	Scophthalmus_maximus
ENSCSAVG00000009618	-	95	68.148	ENSSDUG00000011372	ethe1	76	62.609	Seriola_dumerili
ENSCSAVG00000009618	-	99	65.000	ENSSLDG00000022087	ethe1	66	59.669	Seriola_lalandi_dorsalis
ENSCSAVG00000009618	-	96	64.234	ENSSARG00000012826	ETHE1	98	60.753	Sorex_araneus
ENSCSAVG00000009618	-	100	62.676	ENSSPUG00000015962	ETHE1	98	61.333	Sphenodon_punctatus
ENSCSAVG00000009618	-	99	63.571	ENSSPAG00000012215	ethe1	78	59.307	Stegastes_partitus
ENSCSAVG00000009618	-	98	64.029	ENSSSCG00000003064	ETHE1	94	56.723	Sus_scrofa
ENSCSAVG00000009618	-	97	57.246	ENSTRUG00000009587	ethe1	77	58.515	Takifugu_rubripes
ENSCSAVG00000009618	-	93	59.091	ENSTNIG00000005019	-	99	55.682	Tetraodon_nigroviridis
ENSCSAVG00000009618	-	97	57.246	ENSTNIG00000005018	ethe1	89	56.951	Tetraodon_nigroviridis
ENSCSAVG00000009618	-	98	62.590	ENSTTRG00000014762	ETHE1	93	55.882	Tursiops_truncatus
ENSCSAVG00000009618	-	98	64.029	ENSUAMG00000010548	ETHE1	93	56.723	Ursus_americanus
ENSCSAVG00000009618	-	98	64.029	ENSUMAG00000022938	ETHE1	92	58.667	Ursus_maritimus
ENSCSAVG00000009618	-	98	62.590	ENSVPAG00000005250	ETHE1	69	59.429	Vicugna_pacos
ENSCSAVG00000009618	-	98	64.029	ENSVVUG00000008821	ETHE1	97	58.482	Vulpes_vulpes
ENSCSAVG00000009618	-	99	68.571	ENSXETG00000025507	ethe1	92	63.983	Xenopus_tropicalis
ENSCSAVG00000009618	-	95	67.407	ENSXCOG00000007814	ethe1	80	61.504	Xiphophorus_couchianus
ENSCSAVG00000009618	-	98	50.350	ENSXCOG00000007813	ethe1	77	51.293	Xiphophorus_couchianus
ENSCSAVG00000009618	-	97	65.942	ENSXMAG00000024588	ethe1	97	62.009	Xiphophorus_maculatus
ENSCSAVG00000009618	-	98	62.590	ENSXMAG00000025910	ETHE1	78	57.642	Xiphophorus_maculatus