EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009623 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5310 bases
Position: chrreftig_25:2509984-2515293
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016349	MRP-L47	PF06984.13	3.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016531	-	469	-	ENSCSAVP00000016350	135 (aa)	-	H2ZFI4
ENSCSAVT00000016530	-	554	-	ENSCSAVP00000016349	155 (aa)	-	H2ZFI3

Gene Model

Click here to download ENSCSAVG00000009623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009623's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009623	-	100	39.181	ENSAPOG00000014123	mrpl47	65	39.181	Acanthochromis_polyacanthus
ENSCSAVG00000009623	-	100	40.000	ENSACIG00000012703	mrpl47	66	40.000	Amphilophus_citrinellus
ENSCSAVG00000009623	-	100	38.012	ENSAOCG00000008347	mrpl47	65	38.012	Amphiprion_ocellaris
ENSCSAVG00000009623	-	100	38.012	ENSAPEG00000005830	mrpl47	65	38.012	Amphiprion_percula
ENSCSAVG00000009623	-	79	51.220	ENSAPLG00000011793	MRPL47	59	51.220	Anas_platyrhynchos
ENSCSAVG00000009623	-	55	53.488	ENSACAG00000004517	MRPL47	51	53.488	Anolis_carolinensis
ENSCSAVG00000009623	-	100	40.625	ENSACLG00000019621	mrpl47	64	40.625	Astatotilapia_calliptera
ENSCSAVG00000009623	-	77	36.290	WBGene00015092	mrpl-47	57	36.290	Caenorhabditis_elegans
ENSCSAVG00000009623	-	94	45.946	ENSCJAG00000014820	-	58	45.946	Callithrix_jacchus
ENSCSAVG00000009623	-	99	43.396	ENSCPBG00000026934	MRPL47	65	43.396	Chrysemys_picta_bellii
ENSCSAVG00000009623	-	99	73.125	ENSCING00000001800	-	56	73.125	Ciona_intestinalis
ENSCSAVG00000009623	-	100	40.000	ENSCVAG00000007629	mrpl47	66	40.000	Cyprinodon_variegatus
ENSCSAVG00000009623	-	83	50.781	ENSDORG00000007650	Mrpl47	55	50.781	Dipodomys_ordii
ENSCSAVG00000009623	-	99	37.870	ENSELUG00000004619	mrpl47	66	37.870	Esox_lucius
ENSCSAVG00000009623	-	82	49.606	ENSFALG00000008365	MRPL47	58	49.606	Ficedula_albicollis
ENSCSAVG00000009623	-	100	39.412	ENSFHEG00000007456	mrpl47	64	39.412	Fundulus_heteroclitus
ENSCSAVG00000009623	-	99	38.961	ENSGMOG00000017332	mrpl47	63	38.961	Gadus_morhua
ENSCSAVG00000009623	-	99	40.237	ENSGAFG00000013445	mrpl47	65	40.237	Gambusia_affinis
ENSCSAVG00000009623	-	100	41.401	ENSGACG00000009992	mrpl47	66	41.401	Gasterosteus_aculeatus
ENSCSAVG00000009623	-	99	43.827	ENSGAGG00000016462	MRPL47	53	48.462	Gopherus_agassizii
ENSCSAVG00000009623	-	75	51.724	ENSGGOG00000027171	MRPL47	53	51.724	Gorilla_gorilla
ENSCSAVG00000009623	-	100	39.412	ENSHBUG00000022567	mrpl47	64	39.412	Haplochromis_burtoni
ENSCSAVG00000009623	-	78	47.107	ENSIPUG00000009200	mrpl47	65	39.877	Ictalurus_punctatus
ENSCSAVG00000009623	-	100	38.922	ENSKMAG00000022044	mrpl47	65	38.922	Kryptolebias_marmoratus
ENSCSAVG00000009623	-	100	37.059	ENSLBEG00000027302	mrpl47	58	37.059	Labrus_bergylta
ENSCSAVG00000009623	-	75	46.552	ENSMFAG00000039679	-	52	46.552	Macaca_fascicularis
ENSCSAVG00000009623	-	75	51.724	ENSMFAG00000000293	MRPL47	53	51.724	Macaca_fascicularis
ENSCSAVG00000009623	-	75	51.724	ENSMNEG00000001870	-	55	51.724	Macaca_nemestrina
ENSCSAVG00000009623	-	75	51.724	ENSMLEG00000035312	-	53	51.724	Mandrillus_leucophaeus
ENSCSAVG00000009623	-	89	45.714	ENSMLEG00000036668	-	63	45.714	Mandrillus_leucophaeus
ENSCSAVG00000009623	-	100	40.645	ENSMZEG00005002155	mrpl47	57	40.645	Maylandia_zebra
ENSCSAVG00000009623	-	100	33.735	ENSMMOG00000019550	mrpl47	51	46.957	Mola_mola
ENSCSAVG00000009623	-	74	53.913	ENSMODG00000021301	MRPL47	51	53.913	Monodelphis_domestica
ENSCSAVG00000009623	-	100	40.881	ENSMALG00000017640	mrpl47	59	40.881	Monopterus_albus
ENSCSAVG00000009623	-	100	38.824	ENSNBRG00000004178	mrpl47	66	38.824	Neolamprologus_brichardi
ENSCSAVG00000009623	-	100	38.824	ENSNBRG00000017251	mrpl47	66	38.824	Neolamprologus_brichardi
ENSCSAVG00000009623	-	75	51.724	ENSNLEG00000005831	MRPL47	53	51.724	Nomascus_leucogenys
ENSCSAVG00000009623	-	76	45.763	ENSMEUG00000012649	-	57	45.763	Notamacropus_eugenii
ENSCSAVG00000009623	-	75	51.724	ENSODEG00000002762	-	55	51.724	Octodon_degus
ENSCSAVG00000009623	-	100	38.824	ENSONIG00000001683	mrpl47	66	38.824	Oreochromis_niloticus
ENSCSAVG00000009623	-	74	55.652	ENSOCUG00000017886	MRPL47	50	55.652	Oryctolagus_cuniculus
ENSCSAVG00000009623	-	89	44.928	ENSORLG00000023413	mrpl47	54	44.928	Oryzias_latipes
ENSCSAVG00000009623	-	89	44.928	ENSORLG00020021449	mrpl47	54	44.928	Oryzias_latipes_hni
ENSCSAVG00000009623	-	74	48.696	ENSORLG00015018692	mrpl47	54	44.203	Oryzias_latipes_hsok
ENSCSAVG00000009623	-	100	36.774	ENSOMEG00000014147	mrpl47	60	36.774	Oryzias_melastigma
ENSCSAVG00000009623	-	75	51.724	ENSPPAG00000028033	MRPL47	53	51.724	Pan_paniscus
ENSCSAVG00000009623	-	75	51.724	ENSPTRG00000015648	MRPL47	53	51.724	Pan_troglodytes
ENSCSAVG00000009623	-	75	51.724	ENSPANG00000008191	MRPL47	53	51.724	Papio_anubis
ENSCSAVG00000009623	-	83	46.923	ENSPSIG00000011536	MRPL47	54	46.923	Pelodiscus_sinensis
ENSCSAVG00000009623	-	82	49.606	ENSPMAG00000001838	mrpl47	50	49.606	Petromyzon_marinus
ENSCSAVG00000009623	-	99	39.645	ENSPFOG00000014965	mrpl47	65	39.645	Poecilia_formosa
ENSCSAVG00000009623	-	99	40.237	ENSPLAG00000011483	mrpl47	65	40.237	Poecilia_latipinna
ENSCSAVG00000009623	-	99	39.645	ENSPMEG00000012490	mrpl47	65	39.645	Poecilia_mexicana
ENSCSAVG00000009623	-	99	41.420	ENSPREG00000015080	mrpl47	65	41.420	Poecilia_reticulata
ENSCSAVG00000009623	-	73	54.867	ENSPCAG00000016517	MRPL47	52	54.867	Procavia_capensis
ENSCSAVG00000009623	-	100	39.412	ENSPNYG00000005479	mrpl47	66	39.412	Pundamilia_nyererei
ENSCSAVG00000009623	-	99	40.373	ENSPNAG00000026692	mrpl47	64	40.373	Pygocentrus_nattereri
ENSCSAVG00000009623	-	75	51.724	ENSRBIG00000030725	MRPL47	50	51.724	Rhinopithecus_bieti
ENSCSAVG00000009623	-	75	51.724	ENSRROG00000034003	MRPL47	53	51.724	Rhinopithecus_roxellana
ENSCSAVG00000009623	-	99	41.176	ENSSFOG00015017849	mrpl47	56	41.176	Scleropages_formosus
ENSCSAVG00000009623	-	99	39.412	ENSSMAG00000003013	mrpl47	63	39.412	Scophthalmus_maximus
ENSCSAVG00000009623	-	100	36.471	ENSSLDG00000017795	mrpl47	66	36.471	Seriola_lalandi_dorsalis
ENSCSAVG00000009623	-	100	37.209	ENSSPAG00000002660	mrpl47	65	37.209	Stegastes_partitus
ENSCSAVG00000009623	-	55	53.488	ENSTGUG00000014708	-	53	53.488	Taeniopygia_guttata
ENSCSAVG00000009623	-	74	52.632	ENSTGUG00000010649	-	53	52.632	Taeniopygia_guttata
ENSCSAVG00000009623	-	99	32.716	ENSTRUG00000017597	mrpl47	62	32.716	Takifugu_rubripes
ENSCSAVG00000009623	-	74	46.491	ENSTNIG00000015545	mrpl47	51	46.491	Tetraodon_nigroviridis
ENSCSAVG00000009623	-	73	54.867	ENSUAMG00000007563	MRPL47	51	54.867	Ursus_americanus
ENSCSAVG00000009623	-	99	39.412	ENSXCOG00000002915	mrpl47	65	39.412	Xiphophorus_couchianus
ENSCSAVG00000009623	-	99	39.645	ENSXMAG00000018249	mrpl47	65	39.645	Xiphophorus_maculatus