EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 8576 bases
Position: chrreftig_156:980895-989470
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016388	tRNA-synt_1c	PF00749.21	1.4e-84	1	1
ENSCSAVP00000016389	tRNA-synt_1c	PF00749.21	6.2e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016569	-	1534	-	ENSCSAVP00000016388	478 (aa)	-	H2ZFM2
ENSCSAVT00000016570	-	777	-	ENSCSAVP00000016389	259 (aa)	-	H2ZFM3

Gene Model

Click here to download ENSCSAVG00000009646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009646	-	99	42.944	ENSG00000103356	EARS2	93	42.944	Homo_sapiens
ENSCSAVG00000009646	-	99	43.293	ENSAPOG00000003634	zgc:153247	90	43.293	Acanthochromis_polyacanthus
ENSCSAVG00000009646	-	100	42.857	ENSAMEG00000014339	EARS2	93	42.137	Ailuropoda_melanoleuca
ENSCSAVG00000009646	-	99	44.238	ENSACIG00000023608	zgc:153247	75	48.363	Amphilophus_citrinellus
ENSCSAVG00000009646	-	99	43.673	ENSAOCG00000012957	zgc:153247	90	43.673	Amphiprion_ocellaris
ENSCSAVG00000009646	-	99	44.082	ENSAPEG00000010160	zgc:153247	90	44.082	Amphiprion_percula
ENSCSAVG00000009646	-	99	43.058	ENSATEG00000005214	zgc:153247	89	43.058	Anabas_testudineus
ENSCSAVG00000009646	-	58	56.537	ENSACAG00000011852	EARS2	99	56.537	Anolis_carolinensis
ENSCSAVG00000009646	-	99	43.548	ENSANAG00000005585	EARS2	93	43.548	Aotus_nancymaae
ENSCSAVG00000009646	-	99	43.173	ENSACLG00000005434	zgc:153247	90	42.886	Astatotilapia_calliptera
ENSCSAVG00000009646	-	100	42.222	ENSAMXG00000010705	zgc:153247	91	42.683	Astyanax_mexicanus
ENSCSAVG00000009646	-	100	42.222	ENSBTAG00000045593	EARS2	92	43.000	Bos_taurus
ENSCSAVG00000009646	-	99	39.148	WBGene00001338	ears-2	97	39.148	Caenorhabditis_elegans
ENSCSAVG00000009646	-	100	41.852	ENSCJAG00000020611	EARS2	93	42.799	Callithrix_jacchus
ENSCSAVG00000009646	-	100	41.697	ENSCAFG00000017673	EARS2	93	42.455	Canis_familiaris
ENSCSAVG00000009646	-	100	41.697	ENSCAFG00020021370	EARS2	93	42.540	Canis_lupus_dingo
ENSCSAVG00000009646	-	100	42.435	ENSCHIG00000022512	EARS2	91	42.828	Capra_hircus
ENSCSAVG00000009646	-	100	42.222	ENSTSYG00000013319	EARS2	93	42.424	Carlito_syrichta
ENSCSAVG00000009646	-	58	54.140	ENSCAPG00000015400	EARS2	65	54.412	Cavia_aperea
ENSCSAVG00000009646	-	100	42.593	ENSCPOG00000006866	EARS2	93	42.915	Cavia_porcellus
ENSCSAVG00000009646	-	99	42.944	ENSCCAG00000027770	EARS2	93	42.944	Cebus_capucinus
ENSCSAVG00000009646	-	100	41.852	ENSCATG00000007725	EARS2	93	42.020	Cercocebus_atys
ENSCSAVG00000009646	-	99	42.222	ENSCLAG00000010779	EARS2	93	42.222	Chinchilla_lanigera
ENSCSAVG00000009646	-	100	41.852	ENSCSAG00000006802	EARS2	93	42.222	Chlorocebus_sabaeus
ENSCSAVG00000009646	-	71	46.907	ENSCHOG00000000416	EARS2	65	50.000	Choloepus_hoffmanni
ENSCSAVG00000009646	-	100	44.649	ENSCPBG00000002203	EARS2	93	44.242	Chrysemys_picta_bellii
ENSCSAVG00000009646	-	100	60.827	ENSCING00000002621	-	93	60.827	Ciona_intestinalis
ENSCSAVG00000009646	-	100	42.222	ENSCANG00000025933	EARS2	93	42.944	Colobus_angolensis_palliatus
ENSCSAVG00000009646	-	100	42.963	ENSCGRG00001008031	Ears2	92	42.944	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009646	-	100	42.963	ENSCGRG00000017645	Ears2	92	42.944	Cricetulus_griseus_crigri
ENSCSAVG00000009646	-	99	35.041	ENSCSEG00000020916	zgc:153247	93	35.041	Cynoglossus_semilaevis
ENSCSAVG00000009646	-	99	44.490	ENSCVAG00000014815	zgc:153247	90	44.490	Cyprinodon_variegatus
ENSCSAVG00000009646	-	100	42.066	ENSDARG00000103099	EARS2	96	42.566	Danio_rerio
ENSCSAVG00000009646	-	100	42.593	ENSDNOG00000042899	EARS2	93	42.828	Dasypus_novemcinctus
ENSCSAVG00000009646	-	100	41.852	ENSDORG00000001402	Ears2	93	42.742	Dipodomys_ordii
ENSCSAVG00000009646	-	99	40.816	FBgn0036629	GluRS-m	94	40.816	Drosophila_melanogaster
ENSCSAVG00000009646	-	67	58.730	ENSETEG00000013495	-	62	58.730	Echinops_telfairi
ENSCSAVG00000009646	-	100	41.026	ENSEBUG00000004342	zgc:153247	95	42.612	Eptatretus_burgeri
ENSCSAVG00000009646	-	99	43.205	ENSEASG00005017631	EARS2	93	43.205	Equus_asinus_asinus
ENSCSAVG00000009646	-	99	43.408	ENSECAG00000014955	EARS2	93	43.408	Equus_caballus
ENSCSAVG00000009646	-	100	43.223	ENSEEUG00000002443	EARS2	93	43.000	Erinaceus_europaeus
ENSCSAVG00000009646	-	99	42.799	ENSELUG00000020736	zgc:153247	84	42.799	Esox_lucius
ENSCSAVG00000009646	-	99	42.800	ENSFCAG00000005178	EARS2	93	42.800	Felis_catus
ENSCSAVG00000009646	-	100	43.408	ENSFALG00000003828	EARS2	97	43.408	Ficedula_albicollis
ENSCSAVG00000009646	-	100	41.697	ENSFDAG00000010868	EARS2	95	41.296	Fukomys_damarensis
ENSCSAVG00000009646	-	99	44.106	ENSFHEG00000013890	zgc:153247	95	43.709	Fundulus_heteroclitus
ENSCSAVG00000009646	-	100	43.173	ENSGMOG00000017453	zgc:153247	99	43.238	Gadus_morhua
ENSCSAVG00000009646	-	100	45.387	ENSGALG00000006122	EARS2	97	43.902	Gallus_gallus
ENSCSAVG00000009646	-	100	43.911	ENSGAFG00000011088	zgc:153247	90	44.286	Gambusia_affinis
ENSCSAVG00000009646	-	99	43.121	ENSGACG00000019531	zgc:153247	94	43.121	Gasterosteus_aculeatus
ENSCSAVG00000009646	-	100	44.280	ENSGAGG00000009428	EARS2	93	43.662	Gopherus_agassizii
ENSCSAVG00000009646	-	79	43.498	ENSGGOG00000007365	-	84	49.425	Gorilla_gorilla
ENSCSAVG00000009646	-	99	43.542	ENSHBUG00000006503	zgc:153247	90	43.089	Haplochromis_burtoni
ENSCSAVG00000009646	-	100	43.173	ENSHGLG00000018646	EARS2	93	43.434	Heterocephalus_glaber_female
ENSCSAVG00000009646	-	100	43.173	ENSHGLG00100012460	EARS2	96	43.434	Heterocephalus_glaber_male
ENSCSAVG00000009646	-	99	43.123	ENSHCOG00000020966	zgc:153247	90	42.857	Hippocampus_comes
ENSCSAVG00000009646	-	100	43.625	ENSIPUG00000013399	ears2	84	43.625	Ictalurus_punctatus
ENSCSAVG00000009646	-	99	43.347	ENSSTOG00000023825	EARS2	93	43.347	Ictidomys_tridecemlineatus
ENSCSAVG00000009646	-	99	43.548	ENSJJAG00000008606	Ears2	93	43.548	Jaculus_jaculus
ENSCSAVG00000009646	-	99	43.673	ENSKMAG00000009867	zgc:153247	90	43.673	Kryptolebias_marmoratus
ENSCSAVG00000009646	-	99	42.127	ENSLBEG00000009775	zgc:153247	92	42.127	Labrus_bergylta
ENSCSAVG00000009646	-	99	44.130	ENSLACG00000000935	EARS2	88	44.130	Latimeria_chalumnae
ENSCSAVG00000009646	-	100	44.153	ENSLOCG00000004065	zgc:153247	86	44.153	Lepisosteus_oculatus
ENSCSAVG00000009646	-	99	43.030	ENSLAFG00000001027	EARS2	93	43.030	Loxodonta_africana
ENSCSAVG00000009646	-	100	41.852	ENSMFAG00000045825	EARS2	93	42.222	Macaca_fascicularis
ENSCSAVG00000009646	-	100	41.852	ENSMMUG00000020525	EARS2	89	42.857	Macaca_mulatta
ENSCSAVG00000009646	-	100	41.852	ENSMNEG00000028490	EARS2	93	42.222	Macaca_nemestrina
ENSCSAVG00000009646	-	100	41.852	ENSMLEG00000031859	EARS2	93	42.222	Mandrillus_leucophaeus
ENSCSAVG00000009646	-	99	44.286	ENSMAMG00000006541	zgc:153247	93	44.286	Mastacembelus_armatus
ENSCSAVG00000009646	-	99	43.542	ENSMZEG00005013831	zgc:153247	90	43.089	Maylandia_zebra
ENSCSAVG00000009646	-	100	44.649	ENSMGAG00000006567	EARS2	92	42.623	Meleagris_gallopavo
ENSCSAVG00000009646	-	100	42.593	ENSMAUG00000012883	Ears2	99	39.767	Mesocricetus_auratus
ENSCSAVG00000009646	-	99	43.611	ENSMICG00000007745	EARS2	91	44.397	Microcebus_murinus
ENSCSAVG00000009646	-	100	42.222	ENSMOCG00000012928	Ears2	93	43.145	Microtus_ochrogaster
ENSCSAVG00000009646	-	99	42.537	ENSMMOG00000011306	zgc:153247	95	39.673	Mola_mola
ENSCSAVG00000009646	-	99	44.625	ENSMODG00000006745	-	93	44.625	Monodelphis_domestica
ENSCSAVG00000009646	-	95	40.467	ENSMODG00000011839	-	89	40.769	Monodelphis_domestica
ENSCSAVG00000009646	-	99	43.532	ENSMALG00000009275	zgc:153247	89	43.532	Monopterus_albus
ENSCSAVG00000009646	-	100	43.333	MGP_CAROLIEiJ_G0030414	Ears2	93	41.602	Mus_caroli
ENSCSAVG00000009646	-	100	42.593	ENSMUSG00000030871	Ears2	93	41.096	Mus_musculus
ENSCSAVG00000009646	-	100	42.593	MGP_PahariEiJ_G0013624	Ears2	93	42.944	Mus_pahari
ENSCSAVG00000009646	-	100	42.963	MGP_SPRETEiJ_G0031528	Ears2	93	41.487	Mus_spretus
ENSCSAVG00000009646	-	99	42.857	ENSMPUG00000012116	EARS2	93	42.857	Mustela_putorius_furo
ENSCSAVG00000009646	-	99	43.145	ENSMLUG00000012120	EARS2	93	43.145	Myotis_lucifugus
ENSCSAVG00000009646	-	99	42.944	ENSNGAG00000004141	Ears2	94	42.944	Nannospalax_galili
ENSCSAVG00000009646	-	99	43.911	ENSNBRG00000007510	zgc:153247	89	42.713	Neolamprologus_brichardi
ENSCSAVG00000009646	-	73	45.000	ENSNLEG00000012054	-	77	50.769	Nomascus_leucogenys
ENSCSAVG00000009646	-	100	42.593	ENSMEUG00000015505	EARS2	95	46.114	Notamacropus_eugenii
ENSCSAVG00000009646	-	100	42.593	ENSOPRG00000011980	EARS2	94	43.434	Ochotona_princeps
ENSCSAVG00000009646	-	100	42.435	ENSODEG00000014346	EARS2	93	43.347	Octodon_degus
ENSCSAVG00000009646	-	99	43.173	ENSONIG00000003867	zgc:153247	95	42.886	Oreochromis_niloticus
ENSCSAVG00000009646	-	100	42.435	ENSOANG00000009665	EARS2	91	41.190	Ornithorhynchus_anatinus
ENSCSAVG00000009646	-	99	43.838	ENSOCUG00000008434	EARS2	93	43.838	Oryctolagus_cuniculus
ENSCSAVG00000009646	-	99	43.494	ENSORLG00000010051	zgc:153247	95	42.457	Oryzias_latipes
ENSCSAVG00000009646	-	99	43.494	ENSORLG00020009785	zgc:153247	97	41.331	Oryzias_latipes_hni
ENSCSAVG00000009646	-	99	43.494	ENSORLG00015009164	zgc:153247	89	42.626	Oryzias_latipes_hsok
ENSCSAVG00000009646	-	99	44.082	ENSOMEG00000018724	zgc:153247	89	44.082	Oryzias_melastigma
ENSCSAVG00000009646	-	100	42.963	ENSOGAG00000001074	EARS2	93	43.030	Otolemur_garnettii
ENSCSAVG00000009646	-	100	42.222	ENSOARG00000017122	EARS2	91	42.626	Ovis_aries
ENSCSAVG00000009646	-	99	42.944	ENSPPAG00000028179	EARS2	93	42.944	Pan_paniscus
ENSCSAVG00000009646	-	99	42.515	ENSPPRG00000022131	EARS2	93	42.515	Panthera_pardus
ENSCSAVG00000009646	-	99	42.515	ENSPTIG00000020509	EARS2	93	42.515	Panthera_tigris_altaica
ENSCSAVG00000009646	-	99	42.944	ENSPTRG00000007887	EARS2	93	42.944	Pan_troglodytes
ENSCSAVG00000009646	-	100	42.222	ENSPANG00000015102	EARS2	93	42.626	Papio_anubis
ENSCSAVG00000009646	-	100	44.815	ENSPKIG00000002340	zgc:153247	88	43.927	Paramormyrops_kingsleyae
ENSCSAVG00000009646	-	100	42.086	ENSPSIG00000006509	EARS2	100	42.915	Pelodiscus_sinensis
ENSCSAVG00000009646	-	99	44.512	ENSPMGG00000020747	zgc:153247	88	44.828	Periophthalmus_magnuspinnatus
ENSCSAVG00000009646	-	100	41.852	ENSPEMG00000010930	Ears2	93	42.315	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009646	-	100	42.593	ENSPCIG00000026595	-	62	43.293	Phascolarctos_cinereus
ENSCSAVG00000009646	-	99	44.694	ENSPFOG00000013117	zgc:153247	90	44.694	Poecilia_formosa
ENSCSAVG00000009646	-	100	43.911	ENSPLAG00000006366	zgc:153247	90	44.694	Poecilia_latipinna
ENSCSAVG00000009646	-	99	44.694	ENSPMEG00000007681	zgc:153247	87	44.694	Poecilia_mexicana
ENSCSAVG00000009646	-	100	43.173	ENSPREG00000013860	zgc:153247	90	44.082	Poecilia_reticulata
ENSCSAVG00000009646	-	99	42.944	ENSPPYG00000007190	EARS2	93	42.944	Pongo_abelii
ENSCSAVG00000009646	-	99	41.498	ENSPCAG00000010280	EARS2	93	41.498	Procavia_capensis
ENSCSAVG00000009646	-	100	43.333	ENSPCOG00000022897	EARS2	93	43.813	Propithecus_coquereli
ENSCSAVG00000009646	-	99	43.205	ENSPVAG00000008432	EARS2	93	43.205	Pteropus_vampyrus
ENSCSAVG00000009646	-	99	43.173	ENSPNYG00000007588	zgc:153247	90	42.886	Pundamilia_nyererei
ENSCSAVG00000009646	-	100	40.959	ENSPNAG00000001508	zgc:153247	96	39.286	Pygocentrus_nattereri
ENSCSAVG00000009646	-	100	42.593	ENSRNOG00000025353	Ears2	93	43.058	Rattus_norvegicus
ENSCSAVG00000009646	-	100	41.852	ENSRBIG00000024034	EARS2	93	42.540	Rhinopithecus_bieti
ENSCSAVG00000009646	-	100	41.852	ENSRROG00000033969	EARS2	93	42.339	Rhinopithecus_roxellana
ENSCSAVG00000009646	-	99	35.816	YOL033W	MSE1	90	35.630	Saccharomyces_cerevisiae
ENSCSAVG00000009646	-	99	42.626	ENSSBOG00000030889	EARS2	93	42.626	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009646	-	100	42.963	ENSSHAG00000006329	EARS2	100	42.887	Sarcophilus_harrisii
ENSCSAVG00000009646	-	100	45.756	ENSSFOG00015019361	zgc:153247	99	39.050	Scleropages_formosus
ENSCSAVG00000009646	-	100	43.750	ENSSMAG00000021255	zgc:153247	90	43.788	Scophthalmus_maximus
ENSCSAVG00000009646	-	100	43.173	ENSSDUG00000014030	zgc:153247	90	43.878	Seriola_dumerili
ENSCSAVG00000009646	-	100	43.704	ENSSLDG00000007194	zgc:153247	89	45.514	Seriola_lalandi_dorsalis
ENSCSAVG00000009646	-	100	39.630	ENSSARG00000002939	EARS2	81	38.283	Sorex_araneus
ENSCSAVG00000009646	-	100	41.697	ENSSPUG00000010271	EARS2	93	42.254	Sphenodon_punctatus
ENSCSAVG00000009646	-	99	43.673	ENSSPAG00000011636	zgc:153247	90	43.673	Stegastes_partitus
ENSCSAVG00000009646	-	100	41.111	ENSSSCG00000010797	EARS2	99	37.757	Sus_scrofa
ENSCSAVG00000009646	-	100	42.435	ENSTGUG00000006015	EARS2	100	43.093	Taeniopygia_guttata
ENSCSAVG00000009646	-	99	42.387	ENSTRUG00000015357	zgc:153247	93	42.387	Takifugu_rubripes
ENSCSAVG00000009646	-	99	42.536	ENSTNIG00000008248	zgc:153247	93	42.536	Tetraodon_nigroviridis
ENSCSAVG00000009646	-	100	41.852	ENSTBEG00000006202	EARS2	81	39.492	Tupaia_belangeri
ENSCSAVG00000009646	-	99	42.626	ENSTTRG00000005252	EARS2	93	42.626	Tursiops_truncatus
ENSCSAVG00000009646	-	100	42.857	ENSUMAG00000008941	EARS2	94	39.963	Ursus_maritimus
ENSCSAVG00000009646	-	100	42.066	ENSVVUG00000006049	EARS2	93	42.742	Vulpes_vulpes
ENSCSAVG00000009646	-	99	45.621	ENSXETG00000012433	ears2	93	45.621	Xenopus_tropicalis
ENSCSAVG00000009646	-	99	44.286	ENSXCOG00000015986	zgc:153247	90	44.286	Xiphophorus_couchianus
ENSCSAVG00000009646	-	99	44.490	ENSXMAG00000014857	zgc:153247	90	44.490	Xiphophorus_maculatus