EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 13914 bases
Position: chrreftig_30:2812020-2825933
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016465	DEAD	PF00270.29	1e-07	1	1
ENSCSAVP00000016462	DEAD	PF00270.29	4.6e-07	1	1
ENSCSAVP00000016464	DEAD	PF00270.29	5.3e-07	1	1
ENSCSAVP00000016462	HA2	PF04408.23	4e-15	1	1
ENSCSAVP00000016464	HA2	PF04408.23	4.6e-15	1	1
ENSCSAVP00000016465	HA2	PF04408.23	9.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000016645	-	3288	-	ENSCSAVP00000016464	1096 (aa)	-	H2ZFU8
ENSCSAVT00000016644	-	851	-	ENSCSAVP00000016463	197 (aa)	-	H2ZFU7
ENSCSAVT00000016646	-	1503	-	ENSCSAVP00000016465	501 (aa)	-	H2ZFU9
ENSCSAVT00000016643	-	3120	-	ENSCSAVP00000016462	1036 (aa)	-	H2ZFU6

Gene Model

Click here to download ENSCSAVG00000009685's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009685's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009685	-	77	38.991	ENSCSAVG00000003870	-	64	33.733
ENSCSAVG00000009685	-	85	37.209	ENSCSAVG00000009212	-	53	32.302
ENSCSAVG00000009685	-	77	39.130	ENSCSAVG00000001117	-	88	30.901
ENSCSAVG00000009685	-	78	42.157	ENSCSAVG00000002918	-	50	36.057
ENSCSAVG00000009685	-	76	40.404	ENSCSAVG00000008110	-	65	39.899
ENSCSAVG00000009685	-	83	38.071	ENSCSAVG00000001493	-	59	31.455

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009685	-	100	69.118	ENSG00000134815	DHX34	96	50.901	Homo_sapiens
ENSCSAVG00000009685	-	100	68.137	ENSAPOG00000012602	dhx34	97	49.472	Acanthochromis_polyacanthus
ENSCSAVG00000009685	-	100	65.196	ENSAMEG00000008270	DHX34	96	49.055	Ailuropoda_melanoleuca
ENSCSAVG00000009685	-	100	67.157	ENSACIG00000024038	dhx34	98	49.383	Amphilophus_citrinellus
ENSCSAVG00000009685	-	100	67.647	ENSAOCG00000006310	dhx34	98	49.030	Amphiprion_ocellaris
ENSCSAVG00000009685	-	100	67.647	ENSAPEG00000013725	dhx34	97	49.206	Amphiprion_percula
ENSCSAVG00000009685	-	100	68.137	ENSATEG00000009105	dhx34	98	49.691	Anabas_testudineus
ENSCSAVG00000009685	-	89	47.817	ENSACAG00000004112	DHX34	97	48.228	Anolis_carolinensis
ENSCSAVG00000009685	-	100	69.118	ENSANAG00000038287	DHX34	96	50.450	Aotus_nancymaae
ENSCSAVG00000009685	-	100	68.137	ENSACLG00000021819	dhx34	98	49.383	Astatotilapia_calliptera
ENSCSAVG00000009685	-	100	68.627	ENSAMXG00000019705	dhx34	98	49.737	Astyanax_mexicanus
ENSCSAVG00000009685	-	100	68.627	ENSBTAG00000006848	DHX34	96	50.358	Bos_taurus
ENSCSAVG00000009685	-	81	65.072	WBGene00021365	smgl-2	83	42.047	Caenorhabditis_elegans
ENSCSAVG00000009685	-	100	68.137	ENSCJAG00000011504	DHX34	95	50.450	Callithrix_jacchus
ENSCSAVG00000009685	-	100	68.627	ENSCAFG00000004170	DHX34	96	50.135	Canis_familiaris
ENSCSAVG00000009685	-	100	68.627	ENSCAFG00020001163	DHX34	96	50.541	Canis_lupus_dingo
ENSCSAVG00000009685	-	100	68.627	ENSCHIG00000024526	DHX34	96	50.762	Capra_hircus
ENSCSAVG00000009685	-	100	69.118	ENSTSYG00000031168	DHX34	90	53.633	Carlito_syrichta
ENSCSAVG00000009685	-	99	65.049	ENSCAPG00000014599	DHX34	96	49.596	Cavia_aperea
ENSCSAVG00000009685	-	99	68.317	ENSCPOG00000006510	DHX34	96	49.685	Cavia_porcellus
ENSCSAVG00000009685	-	100	68.137	ENSCCAG00000028675	DHX34	96	50.539	Cebus_capucinus
ENSCSAVG00000009685	-	98	69.118	ENSCATG00000032316	DHX34	96	48.875	Cercocebus_atys
ENSCSAVG00000009685	-	99	68.317	ENSCLAG00000000906	DHX34	96	49.776	Chinchilla_lanigera
ENSCSAVG00000009685	-	99	60.204	ENSCSAG00000002965	DHX34	96	48.378	Chlorocebus_sabaeus
ENSCSAVG00000009685	-	100	90.196	ENSCING00000004681	-	100	81.522	Ciona_intestinalis
ENSCSAVG00000009685	-	100	69.118	ENSCANG00000037215	DHX34	96	50.901	Colobus_angolensis_palliatus
ENSCSAVG00000009685	-	100	66.176	ENSCSEG00000007100	dhx34	97	48.813	Cynoglossus_semilaevis
ENSCSAVG00000009685	-	100	66.667	ENSCVAG00000002423	dhx34	98	49.340	Cyprinodon_variegatus
ENSCSAVG00000009685	-	100	69.118	ENSDARG00000061168	dhx34	98	48.464	Danio_rerio
ENSCSAVG00000009685	-	100	68.627	ENSDNOG00000031738	DHX34	96	45.398	Dasypus_novemcinctus
ENSCSAVG00000009685	-	99	68.844	ENSDORG00000008437	Dhx34	96	49.507	Dipodomys_ordii
ENSCSAVG00000009685	-	99	42.979	FBgn0052533	CG32533	89	42.898	Drosophila_melanogaster
ENSCSAVG00000009685	-	58	65.476	ENSETEG00000013686	-	60	53.651	Echinops_telfairi
ENSCSAVG00000009685	-	100	64.706	ENSEBUG00000014272	dhx34	99	49.639	Eptatretus_burgeri
ENSCSAVG00000009685	-	100	68.627	ENSEASG00005004155	DHX34	96	49.955	Equus_asinus_asinus
ENSCSAVG00000009685	-	100	68.627	ENSECAG00000011354	DHX34	96	52.987	Equus_caballus
ENSCSAVG00000009685	-	84	68.966	ENSEEUG00000009027	DHX34	80	62.500	Erinaceus_europaeus
ENSCSAVG00000009685	-	100	67.157	ENSELUG00000021992	dhx34	98	48.698	Esox_lucius
ENSCSAVG00000009685	-	100	68.627	ENSFCAG00000006144	DHX34	96	49.730	Felis_catus
ENSCSAVG00000009685	-	100	56.863	ENSFDAG00000014928	DHX34	92	54.083	Fukomys_damarensis
ENSCSAVG00000009685	-	100	66.667	ENSFHEG00000000517	dhx34	99	49.426	Fundulus_heteroclitus
ENSCSAVG00000009685	-	100	68.137	ENSGMOG00000013400	dhx34	98	48.804	Gadus_morhua
ENSCSAVG00000009685	-	100	66.667	ENSGACG00000013085	dhx34	97	66.667	Gasterosteus_aculeatus
ENSCSAVG00000009685	-	100	67.647	ENSGAGG00000008776	DHX34	87	55.245	Gopherus_agassizii
ENSCSAVG00000009685	-	100	57.353	ENSGGOG00000010037	DHX34	96	48.559	Gorilla_gorilla
ENSCSAVG00000009685	-	100	68.137	ENSHBUG00000009820	dhx34	98	49.384	Haplochromis_burtoni
ENSCSAVG00000009685	-	99	68.812	ENSHGLG00000004917	DHX34	96	50.134	Heterocephalus_glaber_female
ENSCSAVG00000009685	-	99	68.812	ENSHGLG00100017146	DHX34	96	50.045	Heterocephalus_glaber_male
ENSCSAVG00000009685	-	100	67.647	ENSHCOG00000017578	dhx34	97	49.339	Hippocampus_comes
ENSCSAVG00000009685	-	100	65.686	ENSIPUG00000000655	Dhx34	98	47.476	Ictalurus_punctatus
ENSCSAVG00000009685	-	99	69.307	ENSSTOG00000015831	DHX34	96	50.675	Ictidomys_tridecemlineatus
ENSCSAVG00000009685	-	66	62.745	ENSKMAG00000005402	dhx34	79	58.230	Kryptolebias_marmoratus
ENSCSAVG00000009685	-	100	67.157	ENSLBEG00000018430	dhx34	97	46.930	Labrus_bergylta
ENSCSAVG00000009685	-	100	70.098	ENSLACG00000014421	DHX34	94	53.185	Latimeria_chalumnae
ENSCSAVG00000009685	-	100	66.176	ENSLOCG00000014928	dhx34	96	47.841	Lepisosteus_oculatus
ENSCSAVG00000009685	-	100	68.137	ENSLAFG00000003186	DHX34	96	49.508	Loxodonta_africana
ENSCSAVG00000009685	-	100	69.118	ENSMFAG00000032991	DHX34	96	50.541	Macaca_fascicularis
ENSCSAVG00000009685	-	100	69.118	ENSMMUG00000009275	DHX34	96	50.541	Macaca_mulatta
ENSCSAVG00000009685	-	100	69.118	ENSMNEG00000038649	DHX34	96	50.631	Macaca_nemestrina
ENSCSAVG00000009685	-	100	69.118	ENSMLEG00000041860	DHX34	93	53.855	Mandrillus_leucophaeus
ENSCSAVG00000009685	-	100	68.137	ENSMAMG00000014106	dhx34	96	48.727	Mastacembelus_armatus
ENSCSAVG00000009685	-	100	68.137	ENSMZEG00005024153	dhx34	98	49.383	Maylandia_zebra
ENSCSAVG00000009685	-	100	68.627	ENSMAUG00000013394	Dhx34	96	50.225	Mesocricetus_auratus
ENSCSAVG00000009685	-	100	68.137	ENSMICG00000011585	DHX34	96	50.899	Microcebus_murinus
ENSCSAVG00000009685	-	100	67.647	ENSMOCG00000016843	Dhx34	96	50.721	Microtus_ochrogaster
ENSCSAVG00000009685	-	100	68.627	ENSMMOG00000001357	dhx34	98	49.110	Mola_mola
ENSCSAVG00000009685	-	100	67.647	ENSMODG00000008850	DHX34	97	49.239	Monodelphis_domestica
ENSCSAVG00000009685	-	100	67.157	ENSMALG00000008883	dhx34	97	49.604	Monopterus_albus
ENSCSAVG00000009685	-	100	68.137	MGP_CAROLIEiJ_G0029226	Dhx34	96	50.675	Mus_caroli
ENSCSAVG00000009685	-	100	68.627	ENSMUSG00000006019	Dhx34	96	50.495	Mus_musculus
ENSCSAVG00000009685	-	100	67.647	MGP_PahariEiJ_G0021082	Dhx34	96	50.224	Mus_pahari
ENSCSAVG00000009685	-	100	68.627	MGP_SPRETEiJ_G0030305	Dhx34	96	50.405	Mus_spretus
ENSCSAVG00000009685	-	100	67.157	ENSMPUG00000004925	DHX34	94	51.020	Mustela_putorius_furo
ENSCSAVG00000009685	-	100	69.608	ENSMLUG00000013743	DHX34	96	50.585	Myotis_lucifugus
ENSCSAVG00000009685	-	100	69.118	ENSNGAG00000012974	Dhx34	96	50.270	Nannospalax_galili
ENSCSAVG00000009685	-	100	64.216	ENSNLEG00000003010	DHX34	96	49.057	Nomascus_leucogenys
ENSCSAVG00000009685	-	99	53.667	ENSMEUG00000005067	DHX34	97	43.396	Notamacropus_eugenii
ENSCSAVG00000009685	-	99	69.307	ENSOPRG00000011872	-	84	53.808	Ochotona_princeps
ENSCSAVG00000009685	-	99	67.822	ENSODEG00000006333	DHX34	96	48.839	Octodon_degus
ENSCSAVG00000009685	-	100	68.137	ENSONIG00000004067	dhx34	98	49.691	Oreochromis_niloticus
ENSCSAVG00000009685	-	100	51.504	ENSOANG00000000569	-	94	47.795	Ornithorhynchus_anatinus
ENSCSAVG00000009685	-	99	69.307	ENSOCUG00000014005	DHX34	96	50.090	Oryctolagus_cuniculus
ENSCSAVG00000009685	-	100	66.667	ENSORLG00000002308	dhx34	97	48.639	Oryzias_latipes
ENSCSAVG00000009685	-	100	66.667	ENSORLG00020017122	dhx34	96	48.376	Oryzias_latipes_hni
ENSCSAVG00000009685	-	100	66.667	ENSORLG00015005813	dhx34	98	47.611	Oryzias_latipes_hsok
ENSCSAVG00000009685	-	100	67.157	ENSOMEG00000001279	dhx34	97	49.470	Oryzias_melastigma
ENSCSAVG00000009685	-	100	68.627	ENSOGAG00000002061	DHX34	96	50.942	Otolemur_garnettii
ENSCSAVG00000009685	-	100	66.176	ENSOARG00000011049	DHX34	91	52.745	Ovis_aries
ENSCSAVG00000009685	-	100	58.824	ENSPPAG00000029582	DHX34	96	48.829	Pan_paniscus
ENSCSAVG00000009685	-	100	68.627	ENSPPRG00000002535	DHX34	96	50.090	Panthera_pardus
ENSCSAVG00000009685	-	100	48.014	ENSPTIG00000018435	DHX34	93	40.956	Panthera_tigris_altaica
ENSCSAVG00000009685	-	100	69.118	ENSPTRG00000011207	DHX34	96	50.811	Pan_troglodytes
ENSCSAVG00000009685	-	100	69.118	ENSPANG00000011774	DHX34	96	50.631	Papio_anubis
ENSCSAVG00000009685	-	100	68.627	ENSPKIG00000013394	dhx34	98	49.115	Paramormyrops_kingsleyae
ENSCSAVG00000009685	-	100	62.745	ENSPMGG00000016033	dhx34	98	49.821	Periophthalmus_magnuspinnatus
ENSCSAVG00000009685	-	100	69.118	ENSPEMG00000017613	Dhx34	96	50.359	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009685	-	98	65.686	ENSPMAG00000000368	dhx34	99	52.174	Petromyzon_marinus
ENSCSAVG00000009685	-	99	67.327	ENSPCIG00000000889	DHX34	90	57.734	Phascolarctos_cinereus
ENSCSAVG00000009685	-	100	66.667	ENSPFOG00000011417	dhx34	97	48.856	Poecilia_formosa
ENSCSAVG00000009685	-	100	65.686	ENSPLAG00000021500	dhx34	97	48.592	Poecilia_latipinna
ENSCSAVG00000009685	-	100	66.667	ENSPMEG00000008135	dhx34	97	48.856	Poecilia_mexicana
ENSCSAVG00000009685	-	100	65.686	ENSPREG00000016403	dhx34	97	48.980	Poecilia_reticulata
ENSCSAVG00000009685	-	100	69.118	ENSPPYG00000010172	DHX34	96	50.541	Pongo_abelii
ENSCSAVG00000009685	-	100	68.627	ENSPCAG00000003843	DHX34	75	57.183	Procavia_capensis
ENSCSAVG00000009685	-	100	68.627	ENSPCOG00000027801	DHX34	96	50.628	Propithecus_coquereli
ENSCSAVG00000009685	-	89	49.678	ENSPVAG00000004017	DHX34	100	50.108	Pteropus_vampyrus
ENSCSAVG00000009685	-	100	68.137	ENSPNYG00000007967	dhx34	98	49.514	Pundamilia_nyererei
ENSCSAVG00000009685	-	100	70.588	ENSPNAG00000015028	dhx34	98	49.252	Pygocentrus_nattereri
ENSCSAVG00000009685	-	100	67.647	ENSRNOG00000047575	Dhx34	96	50.748	Rattus_norvegicus
ENSCSAVG00000009685	-	100	64.151	ENSRBIG00000037382	DHX34	96	49.642	Rhinopithecus_bieti
ENSCSAVG00000009685	-	100	69.118	ENSRROG00000042872	DHX34	96	50.360	Rhinopithecus_roxellana
ENSCSAVG00000009685	-	100	68.627	ENSSBOG00000026147	DHX34	88	66.957	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009685	-	100	69.118	ENSSFOG00015023082	dhx34	98	49.429	Scleropages_formosus
ENSCSAVG00000009685	-	100	66.667	ENSSMAG00000000815	dhx34	98	48.461	Scophthalmus_maximus
ENSCSAVG00000009685	-	84	67.157	ENSSDUG00000021018	dhx34	95	51.134	Seriola_dumerili
ENSCSAVG00000009685	-	100	67.157	ENSSLDG00000005497	dhx34	97	49.211	Seriola_lalandi_dorsalis
ENSCSAVG00000009685	-	100	65.196	ENSSPUG00000012308	DHX34	92	55.608	Sphenodon_punctatus
ENSCSAVG00000009685	-	100	67.157	ENSSPAG00000023353	dhx34	96	49.724	Stegastes_partitus
ENSCSAVG00000009685	-	99	67.488	ENSSSCG00000003114	DHX34	93	51.459	Sus_scrofa
ENSCSAVG00000009685	-	100	66.667	ENSTRUG00000010539	dhx34	98	47.757	Takifugu_rubripes
ENSCSAVG00000009685	-	100	67.157	ENSTNIG00000016288	dhx34	97	67.157	Tetraodon_nigroviridis
ENSCSAVG00000009685	-	86	69.608	ENSTBEG00000007047	DHX34	75	56.294	Tupaia_belangeri
ENSCSAVG00000009685	-	98	60.784	ENSTTRG00000002257	DHX34	96	47.662	Tursiops_truncatus
ENSCSAVG00000009685	-	100	67.647	ENSUAMG00000020189	DHX34	96	50.090	Ursus_americanus
ENSCSAVG00000009685	-	100	68.627	ENSVVUG00000023515	DHX34	96	50.314	Vulpes_vulpes
ENSCSAVG00000009685	-	100	65.854	ENSXETG00000012176	dhx34	98	49.866	Xenopus_tropicalis
ENSCSAVG00000009685	-	100	66.176	ENSXCOG00000009309	dhx34	98	49.376	Xiphophorus_couchianus
ENSCSAVG00000009685	-	100	66.176	ENSXMAG00000007699	dhx34	97	49.160	Xiphophorus_maculatus