EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000009920 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 5369 bases
Position: chrreftig_0:2483246-2488614
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016872	DEAD	PF00270.29	9.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017054	-	1435	-	ENSCSAVP00000016872	369 (aa)	-	H2ZH06

Gene Model

Click here to download ENSCSAVG00000009920's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009920's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000009920	-	77	33.445	ENSCSAVG00000004191	-	58	33.445
ENSCSAVG00000009920	-	98	33.423	ENSCSAVG00000002353	-	70	35.055
ENSCSAVG00000009920	-	97	38.587	ENSCSAVG00000009116	-	77	38.587
ENSCSAVG00000009920	-	87	31.307	ENSCSAVG00000002180	-	86	31.307
ENSCSAVG00000009920	-	99	31.733	ENSCSAVG00000000522	-	88	31.733
ENSCSAVG00000009920	-	99	69.106	ENSCSAVG00000000630	-	98	69.106
ENSCSAVG00000009920	-	98	36.438	ENSCSAVG00000002162	-	86	36.438
ENSCSAVG00000009920	-	99	34.146	ENSCSAVG00000003045	-	96	34.132
ENSCSAVG00000009920	-	90	38.710	ENSCSAVG00000003028	-	54	38.710
ENSCSAVG00000009920	-	89	32.344	ENSCSAVG00000003023	-	60	32.344
ENSCSAVG00000009920	-	96	31.373	ENSCSAVG00000008916	-	100	30.581
ENSCSAVG00000009920	-	98	33.156	ENSCSAVG00000004304	-	60	32.982
ENSCSAVG00000009920	-	94	31.302	ENSCSAVG00000004895	-	67	31.302
ENSCSAVG00000009920	-	91	30.939	ENSCSAVG00000003375	-	61	30.939
ENSCSAVG00000009920	-	98	32.440	ENSCSAVG00000011566	-	83	32.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009920	-	100	92.412	ENSG00000141543	EIF4A3	90	92.412	Homo_sapiens
ENSCSAVG00000009920	-	100	92.141	ENSAPOG00000017112	eif4a3	91	92.141	Acanthochromis_polyacanthus
ENSCSAVG00000009920	-	99	92.308	ENSAMEG00000015194	EIF4A3	90	92.308	Ailuropoda_melanoleuca
ENSCSAVG00000009920	-	100	92.141	ENSACIG00000009719	eif4a3	91	92.141	Amphilophus_citrinellus
ENSCSAVG00000009920	-	100	92.141	ENSAOCG00000021655	eif4a3	91	92.141	Amphiprion_ocellaris
ENSCSAVG00000009920	-	100	92.141	ENSAPEG00000018658	eif4a3	91	92.141	Amphiprion_percula
ENSCSAVG00000009920	-	100	92.141	ENSATEG00000014793	eif4a3	91	92.141	Anabas_testudineus
ENSCSAVG00000009920	-	95	91.761	ENSAPLG00000014717	EIF4A3	100	91.761	Anas_platyrhynchos
ENSCSAVG00000009920	-	99	92.582	ENSACAG00000014384	EIF4A3	84	92.582	Anolis_carolinensis
ENSCSAVG00000009920	-	100	92.412	ENSANAG00000005557	EIF4A3	90	92.412	Aotus_nancymaae
ENSCSAVG00000009920	-	100	91.870	ENSACLG00000004174	eif4a3	91	91.870	Astatotilapia_calliptera
ENSCSAVG00000009920	-	100	92.141	ENSAMXG00000020882	eif4a3	93	92.055	Astyanax_mexicanus
ENSCSAVG00000009920	-	100	92.412	ENSBTAG00000016023	EIF4A3	90	92.412	Bos_taurus
ENSCSAVG00000009920	-	100	87.534	WBGene00022029	Y65B4A.6	100	87.455	Caenorhabditis_elegans
ENSCSAVG00000009920	-	100	87.263	WBGene00018007	F33D11.10	92	87.263	Caenorhabditis_elegans
ENSCSAVG00000009920	-	100	92.412	ENSCJAG00000048589	-	90	92.412	Callithrix_jacchus
ENSCSAVG00000009920	-	100	86.992	ENSCJAG00000016777	-	90	86.992	Callithrix_jacchus
ENSCSAVG00000009920	-	100	92.412	ENSCAFG00000005614	EIF4A3	90	92.412	Canis_familiaris
ENSCSAVG00000009920	-	100	92.412	ENSCAFG00020008253	EIF4A3	90	92.412	Canis_lupus_dingo
ENSCSAVG00000009920	-	100	92.412	ENSCHIG00000024284	EIF4A3	90	92.412	Capra_hircus
ENSCSAVG00000009920	-	100	92.412	ENSTSYG00000008738	EIF4A3	90	92.412	Carlito_syrichta
ENSCSAVG00000009920	-	96	88.451	ENSCAPG00000000964	EIF4A3	92	88.451	Cavia_aperea
ENSCSAVG00000009920	-	100	92.412	ENSCPOG00000006485	EIF4A3	90	92.412	Cavia_porcellus
ENSCSAVG00000009920	-	100	92.412	ENSCCAG00000036144	EIF4A3	90	92.412	Cebus_capucinus
ENSCSAVG00000009920	-	100	84.824	ENSCATG00000039629	-	89	84.824	Cercocebus_atys
ENSCSAVG00000009920	-	100	92.412	ENSCATG00000039262	-	90	92.412	Cercocebus_atys
ENSCSAVG00000009920	-	100	92.412	ENSCLAG00000014502	EIF4A3	90	92.412	Chinchilla_lanigera
ENSCSAVG00000009920	-	90	90.964	ENSCPBG00000017801	EIF4A3	98	90.964	Chrysemys_picta_bellii
ENSCSAVG00000009920	-	100	97.832	ENSCING00000007818	-	90	97.832	Ciona_intestinalis
ENSCSAVG00000009920	-	100	76.423	ENSCANG00000043503	EIF4A3	88	76.423	Colobus_angolensis_palliatus
ENSCSAVG00000009920	-	100	74.797	ENSCGRG00001018048	-	90	74.797	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009920	-	100	92.412	ENSCGRG00001022918	-	90	92.412	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009920	-	96	92.090	ENSCGRG00000017119	-	100	92.090	Cricetulus_griseus_crigri
ENSCSAVG00000009920	-	100	74.526	ENSCGRG00000001983	-	90	74.526	Cricetulus_griseus_crigri
ENSCSAVG00000009920	-	100	92.412	ENSCSEG00000021058	eif4a3	91	92.412	Cynoglossus_semilaevis
ENSCSAVG00000009920	-	100	92.954	ENSCVAG00000006864	eif4a3	91	92.954	Cyprinodon_variegatus
ENSCSAVG00000009920	-	100	91.870	ENSDARG00000102978	eif4a3	91	91.870	Danio_rerio
ENSCSAVG00000009920	-	97	91.341	ENSDNOG00000009027	EIF4A3	97	91.341	Dasypus_novemcinctus
ENSCSAVG00000009920	-	100	92.412	ENSDORG00000013028	-	90	92.412	Dipodomys_ordii
ENSCSAVG00000009920	-	100	89.160	FBgn0037573	CG7483	92	89.160	Drosophila_melanogaster
ENSCSAVG00000009920	-	100	91.870	ENSEBUG00000003713	eif4a3	85	91.870	Eptatretus_burgeri
ENSCSAVG00000009920	-	100	92.412	ENSEASG00005005107	EIF4A3	90	92.412	Equus_asinus_asinus
ENSCSAVG00000009920	-	100	92.412	ENSECAG00000015925	EIF4A3	90	92.412	Equus_caballus
ENSCSAVG00000009920	-	100	85.637	ENSEEUG00000006008	EIF4A3	90	85.637	Erinaceus_europaeus
ENSCSAVG00000009920	-	100	91.870	ENSELUG00000018528	eif4a3	91	91.870	Esox_lucius
ENSCSAVG00000009920	-	100	92.412	ENSFCAG00000008246	EIF4A3	90	92.412	Felis_catus
ENSCSAVG00000009920	-	96	92.113	ENSFALG00000002343	EIF4A3	100	92.113	Ficedula_albicollis
ENSCSAVG00000009920	-	100	92.412	ENSFDAG00000020774	EIF4A3	90	92.412	Fukomys_damarensis
ENSCSAVG00000009920	-	99	91.758	ENSGMOG00000001560	eif4a3	93	91.758	Gadus_morhua
ENSCSAVG00000009920	-	100	92.412	ENSGALG00000008530	EIF4A3	90	92.412	Gallus_gallus
ENSCSAVG00000009920	-	100	92.683	ENSGAFG00000013487	eif4a3	91	92.683	Gambusia_affinis
ENSCSAVG00000009920	-	100	92.141	ENSGACG00000020004	eif4a3	92	92.308	Gasterosteus_aculeatus
ENSCSAVG00000009920	-	100	92.141	ENSGAGG00000016434	EIF4A3	91	92.141	Gopherus_agassizii
ENSCSAVG00000009920	-	100	92.412	ENSGGOG00000012918	EIF4A3	90	92.412	Gorilla_gorilla
ENSCSAVG00000009920	-	100	92.141	ENSHBUG00000014892	eif4a3	91	92.141	Haplochromis_burtoni
ENSCSAVG00000009920	-	100	92.412	ENSHGLG00000004635	EIF4A3	90	92.412	Heterocephalus_glaber_female
ENSCSAVG00000009920	-	100	92.412	ENSHGLG00100006837	EIF4A3	90	92.412	Heterocephalus_glaber_male
ENSCSAVG00000009920	-	98	78.763	ENSHCOG00000011335	eif4a3	80	78.763	Hippocampus_comes
ENSCSAVG00000009920	-	100	91.870	ENSIPUG00000021785	eif4a3	91	91.870	Ictalurus_punctatus
ENSCSAVG00000009920	-	100	92.412	ENSSTOG00000002664	EIF4A3	90	92.412	Ictidomys_tridecemlineatus
ENSCSAVG00000009920	-	100	92.412	ENSJJAG00000015870	-	90	92.412	Jaculus_jaculus
ENSCSAVG00000009920	-	100	91.870	ENSJJAG00000016503	-	90	91.870	Jaculus_jaculus
ENSCSAVG00000009920	-	99	89.286	ENSKMAG00000010113	eif4a3	85	89.286	Kryptolebias_marmoratus
ENSCSAVG00000009920	-	98	90.358	ENSLBEG00000020356	eif4a3	97	90.358	Labrus_bergylta
ENSCSAVG00000009920	-	100	92.683	ENSLACG00000000108	EIF4A3	91	92.683	Latimeria_chalumnae
ENSCSAVG00000009920	-	100	92.141	ENSLOCG00000015796	eif4a3	90	92.141	Lepisosteus_oculatus
ENSCSAVG00000009920	-	100	92.412	ENSLAFG00000015628	EIF4A3	90	92.412	Loxodonta_africana
ENSCSAVG00000009920	-	100	92.412	ENSMFAG00000043778	EIF4A3	90	92.412	Macaca_fascicularis
ENSCSAVG00000009920	-	100	84.824	ENSMFAG00000018955	-	91	84.824	Macaca_fascicularis
ENSCSAVG00000009920	-	100	84.282	ENSMMUG00000007050	-	92	84.282	Macaca_mulatta
ENSCSAVG00000009920	-	100	92.141	ENSMMUG00000009590	EIF4A3	90	92.141	Macaca_mulatta
ENSCSAVG00000009920	-	99	92.582	ENSMNEG00000039333	-	85	92.582	Macaca_nemestrina
ENSCSAVG00000009920	-	100	85.095	ENSMNEG00000038447	-	92	85.095	Macaca_nemestrina
ENSCSAVG00000009920	-	96	92.090	ENSMLEG00000032948	EIF4A3	100	92.090	Mandrillus_leucophaeus
ENSCSAVG00000009920	-	100	92.141	ENSMAMG00000017369	eif4a3	91	92.141	Mastacembelus_armatus
ENSCSAVG00000009920	-	100	92.141	ENSMZEG00005000259	-	91	92.141	Maylandia_zebra
ENSCSAVG00000009920	-	100	85.366	ENSMZEG00005015371	eif4a3	90	85.366	Maylandia_zebra
ENSCSAVG00000009920	-	96	92.113	ENSMGAG00000007270	EIF4A3	100	92.113	Meleagris_gallopavo
ENSCSAVG00000009920	-	100	92.412	ENSMAUG00000012955	-	90	92.412	Mesocricetus_auratus
ENSCSAVG00000009920	-	100	87.263	ENSMICG00000044243	-	91	87.263	Microcebus_murinus
ENSCSAVG00000009920	-	99	83.424	ENSMICG00000011946	-	89	83.424	Microcebus_murinus
ENSCSAVG00000009920	-	100	86.450	ENSMICG00000045127	-	91	86.450	Microcebus_murinus
ENSCSAVG00000009920	-	100	86.595	ENSMICG00000009136	-	90	86.595	Microcebus_murinus
ENSCSAVG00000009920	-	100	90.515	ENSMICG00000034467	-	91	90.515	Microcebus_murinus
ENSCSAVG00000009920	-	100	86.992	ENSMICG00000041585	-	89	86.992	Microcebus_murinus
ENSCSAVG00000009920	-	100	89.130	ENSMOCG00000017297	-	88	68.097	Microtus_ochrogaster
ENSCSAVG00000009920	-	99	86.685	ENSMMOG00000018352	eif4a3	85	86.685	Mola_mola
ENSCSAVG00000009920	-	100	88.347	ENSMODG00000003697	-	90	88.347	Monodelphis_domestica
ENSCSAVG00000009920	-	100	92.412	ENSMODG00000002190	-	90	92.412	Monodelphis_domestica
ENSCSAVG00000009920	-	100	92.141	ENSMALG00000016324	eif4a3	91	92.141	Monopterus_albus
ENSCSAVG00000009920	-	100	92.141	MGP_CAROLIEiJ_G0017495	-	90	92.141	Mus_caroli
ENSCSAVG00000009920	-	100	91.057	ENSMUSG00000094973	Gm8994	90	91.057	Mus_musculus
ENSCSAVG00000009920	-	100	92.141	ENSMUSG00000025580	Eif4a3	90	92.141	Mus_musculus
ENSCSAVG00000009920	-	100	91.328	ENSMUSG00000107906	Gm5580	90	91.328	Mus_musculus
ENSCSAVG00000009920	-	100	92.412	MGP_PahariEiJ_G0018622	-	90	92.412	Mus_pahari
ENSCSAVG00000009920	-	100	92.412	MGP_SPRETEiJ_G0018339	Eif4a3	90	92.412	Mus_spretus
ENSCSAVG00000009920	-	96	92.113	ENSMPUG00000012216	EIF4A3	84	92.113	Mustela_putorius_furo
ENSCSAVG00000009920	-	97	77.591	ENSMLUG00000024690	-	100	77.591	Myotis_lucifugus
ENSCSAVG00000009920	-	100	88.076	ENSMLUG00000012233	-	90	88.076	Myotis_lucifugus
ENSCSAVG00000009920	-	93	88.986	ENSMLUG00000009585	-	100	88.986	Myotis_lucifugus
ENSCSAVG00000009920	-	100	92.412	ENSNGAG00000003189	-	90	92.412	Nannospalax_galili
ENSCSAVG00000009920	-	100	92.141	ENSNBRG00000021671	eif4a3	91	92.141	Neolamprologus_brichardi
ENSCSAVG00000009920	-	100	92.412	ENSNLEG00000015595	EIF4A3	90	92.412	Nomascus_leucogenys
ENSCSAVG00000009920	-	100	82.385	ENSMEUG00000008521	EIF4A3	90	82.385	Notamacropus_eugenii
ENSCSAVG00000009920	-	100	92.412	ENSODEG00000010300	EIF4A3	90	92.412	Octodon_degus
ENSCSAVG00000009920	-	100	92.141	ENSONIG00000019828	eif4a3	91	92.141	Oreochromis_niloticus
ENSCSAVG00000009920	-	67	87.500	ENSOANG00000000334	EIF4A3	87	87.500	Ornithorhynchus_anatinus
ENSCSAVG00000009920	-	100	92.412	ENSORLG00000018405	eif4a3	91	92.412	Oryzias_latipes
ENSCSAVG00000009920	-	100	92.412	ENSOMEG00000007998	eif4a3	91	92.412	Oryzias_melastigma
ENSCSAVG00000009920	-	100	92.412	ENSOGAG00000007495	-	90	92.412	Otolemur_garnettii
ENSCSAVG00000009920	-	100	91.870	ENSOGAG00000026206	-	90	91.870	Otolemur_garnettii
ENSCSAVG00000009920	-	100	92.412	ENSOARG00000002169	-	90	92.412	Ovis_aries
ENSCSAVG00000009920	-	100	88.618	ENSOARG00000005144	-	90	88.618	Ovis_aries
ENSCSAVG00000009920	-	90	85.886	ENSPPAG00000021017	-	89	85.843	Pan_paniscus
ENSCSAVG00000009920	-	100	92.412	ENSPPRG00000021873	EIF4A3	90	92.412	Panthera_pardus
ENSCSAVG00000009920	-	98	90.833	ENSPTIG00000009646	EIF4A3	99	90.833	Panthera_tigris_altaica
ENSCSAVG00000009920	-	100	90.270	ENSPTRG00000009737	EIF4A3	90	90.270	Pan_troglodytes
ENSCSAVG00000009920	-	100	92.412	ENSPANG00000019672	-	90	92.412	Papio_anubis
ENSCSAVG00000009920	-	100	83.469	ENSPANG00000021217	-	89	83.469	Papio_anubis
ENSCSAVG00000009920	-	100	91.599	ENSPKIG00000016912	eif4a3	91	91.599	Paramormyrops_kingsleyae
ENSCSAVG00000009920	-	76	94.265	ENSPSIG00000004036	EIF4A3	100	94.265	Pelodiscus_sinensis
ENSCSAVG00000009920	-	100	92.412	ENSPEMG00000009441	-	90	92.412	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009920	-	97	91.597	ENSPCIG00000005856	-	98	92.045	Phascolarctos_cinereus
ENSCSAVG00000009920	-	100	92.683	ENSPFOG00000009300	eif4a3	89	92.683	Poecilia_formosa
ENSCSAVG00000009920	-	100	92.683	ENSPLAG00000007436	eif4a3	91	92.683	Poecilia_latipinna
ENSCSAVG00000009920	-	100	92.683	ENSPMEG00000008078	eif4a3	91	92.683	Poecilia_mexicana
ENSCSAVG00000009920	-	100	92.683	ENSPREG00000006006	eif4a3	91	92.683	Poecilia_reticulata
ENSCSAVG00000009920	-	100	92.412	ENSPPYG00000008714	EIF4A3	90	92.412	Pongo_abelii
ENSCSAVG00000009920	-	100	75.339	ENSPCAG00000002931	EIF4A3	89	75.339	Procavia_capensis
ENSCSAVG00000009920	-	100	92.412	ENSPCOG00000020004	EIF4A3	90	92.412	Propithecus_coquereli
ENSCSAVG00000009920	-	100	92.412	ENSPVAG00000003627	EIF4A3	90	92.412	Pteropus_vampyrus
ENSCSAVG00000009920	-	100	92.141	ENSPNYG00000016865	eif4a3	91	92.141	Pundamilia_nyererei
ENSCSAVG00000009920	-	100	92.141	ENSPNAG00000008053	eif4a3	91	92.141	Pygocentrus_nattereri
ENSCSAVG00000009920	-	100	92.412	ENSRNOG00000045791	Eif4a3	90	92.412	Rattus_norvegicus
ENSCSAVG00000009920	-	100	92.412	ENSRBIG00000029705	EIF4A3	90	92.412	Rhinopithecus_bieti
ENSCSAVG00000009920	-	100	92.412	ENSRROG00000042322	EIF4A3	90	92.412	Rhinopithecus_roxellana
ENSCSAVG00000009920	-	100	63.415	YKR059W	TIF1	93	63.415	Saccharomyces_cerevisiae
ENSCSAVG00000009920	-	100	63.415	YJL138C	TIF2	93	63.415	Saccharomyces_cerevisiae
ENSCSAVG00000009920	-	99	63.342	YDR021W	-	93	63.342	Saccharomyces_cerevisiae
ENSCSAVG00000009920	-	100	92.412	ENSSBOG00000024694	EIF4A3	90	92.412	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009920	-	100	92.412	ENSSHAG00000004638	-	82	92.412	Sarcophilus_harrisii
ENSCSAVG00000009920	-	100	92.141	ENSSHAG00000005751	-	90	92.141	Sarcophilus_harrisii
ENSCSAVG00000009920	-	100	92.141	ENSSFOG00015004896	-	91	92.141	Scleropages_formosus
ENSCSAVG00000009920	-	100	92.412	ENSSFOG00015022017	eif4a3	91	92.412	Scleropages_formosus
ENSCSAVG00000009920	-	100	91.870	ENSSMAG00000021078	eif4a3	91	91.870	Scophthalmus_maximus
ENSCSAVG00000009920	-	100	92.141	ENSSDUG00000021512	eif4a3	91	92.141	Seriola_dumerili
ENSCSAVG00000009920	-	89	91.131	ENSSLDG00000010112	eif4a3	84	91.131	Seriola_lalandi_dorsalis
ENSCSAVG00000009920	-	60	91.031	ENSSARG00000009017	-	99	91.031	Sorex_araneus
ENSCSAVG00000009920	-	100	92.141	ENSSPUG00000013935	EIF4A3	90	92.141	Sphenodon_punctatus
ENSCSAVG00000009920	-	99	92.308	ENSSPAG00000017012	eif4a3	89	92.308	Stegastes_partitus
ENSCSAVG00000009920	-	100	92.412	ENSSSCG00000017155	EIF4A3	90	92.412	Sus_scrofa
ENSCSAVG00000009920	-	89	91.818	ENSTGUG00000002132	EIF4A3	100	91.818	Taeniopygia_guttata
ENSCSAVG00000009920	-	100	92.141	ENSTRUG00000011543	eif4a3	91	92.141	Takifugu_rubripes
ENSCSAVG00000009920	-	100	91.892	ENSTNIG00000002924	eif4a3	90	91.892	Tetraodon_nigroviridis
ENSCSAVG00000009920	-	96	82.203	ENSTTRG00000000514	EIF4A3	100	82.203	Tursiops_truncatus
ENSCSAVG00000009920	-	100	92.412	ENSUAMG00000027453	EIF4A3	90	92.412	Ursus_americanus
ENSCSAVG00000009920	-	99	89.617	ENSUMAG00000014617	EIF4A3	99	91.477	Ursus_maritimus
ENSCSAVG00000009920	-	100	92.412	ENSVVUG00000017984	EIF4A3	90	92.412	Vulpes_vulpes
ENSCSAVG00000009920	-	100	91.870	ENSXETG00000013720	eif4a3	89	91.870	Xenopus_tropicalis
ENSCSAVG00000009920	-	100	91.870	ENSXCOG00000010824	eif4a3	90	91.870	Xiphophorus_couchianus
ENSCSAVG00000009920	-	100	92.683	ENSXMAG00000014111	eif4a3	91	92.683	Xiphophorus_maculatus