EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009934 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 11271 bases
Position: chrreftig_9:1404457-1415727
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016894	mRNA_cap_enzyme	PF01331.19	5.5e-67	1	1
ENSCSAVP00000016897	mRNA_cap_enzyme	PF01331.19	5.5e-67	1	1
ENSCSAVP00000016895	mRNA_cap_enzyme	PF01331.19	5.8e-67	1	1
ENSCSAVP00000016896	mRNA_cap_enzyme	PF01331.19	1.9e-64	1	1
ENSCSAVP00000016894	mRNA_cap_C	PF03919.15	3e-21	1	1
ENSCSAVP00000016896	mRNA_cap_C	PF03919.15	3.1e-21	1	1
ENSCSAVP00000016895	mRNA_cap_C	PF03919.15	3.3e-21	1	1
ENSCSAVP00000016897	mRNA_cap_C	PF03919.15	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017077	-	2173	-	ENSCSAVP00000016895	588 (aa)	-	H2ZH29
ENSCSAVT00000017076	-	2095	-	ENSCSAVP00000016894	556 (aa)	-	H2ZH28
ENSCSAVT00000017079	-	1617	-	ENSCSAVP00000016897	539 (aa)	-	H2ZH31
ENSCSAVT00000017078	-	2119	-	ENSCSAVP00000016896	565 (aa)	-	H2ZH30

Gene Model

Click here to download ENSCSAVG00000009934's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009934's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009934	-	99	60.573	ENSG00000111880	RNGTT	99	56.025	Homo_sapiens
ENSCSAVG00000009934	-	99	58.036	ENSAPOG00000008897	rngtt	93	64.615	Acanthochromis_polyacanthus
ENSCSAVG00000009934	-	99	60.573	ENSAMEG00000000368	RNGTT	99	57.820	Ailuropoda_melanoleuca
ENSCSAVG00000009934	-	85	56.729	ENSACIG00000009532	rngtt	95	57.438	Amphilophus_citrinellus
ENSCSAVG00000009934	-	78	60.360	ENSAOCG00000018488	rngtt	86	61.798	Amphiprion_ocellaris
ENSCSAVG00000009934	-	99	58.929	ENSAPEG00000008877	rngtt	93	66.154	Amphiprion_percula
ENSCSAVG00000009934	-	95	57.435	ENSATEG00000018015	rngtt	94	57.778	Anabas_testudineus
ENSCSAVG00000009934	-	99	58.907	ENSAPLG00000014978	RNGTT	94	59.436	Anas_platyrhynchos
ENSCSAVG00000009934	-	95	58.287	ENSACAG00000014716	RNGTT	93	58.736	Anolis_carolinensis
ENSCSAVG00000009934	-	99	56.115	ENSANAG00000022118	RNGTT	94	60.040	Aotus_nancymaae
ENSCSAVG00000009934	-	99	59.115	ENSACLG00000025133	rngtt	94	59.541	Astatotilapia_calliptera
ENSCSAVG00000009934	-	55	57.508	ENSAMXG00000043201	rngtt	77	63.941	Astyanax_mexicanus
ENSCSAVG00000009934	-	99	60.394	ENSBTAG00000002725	RNGTT	94	60.394	Bos_taurus
ENSCSAVG00000009934	-	100	40.342	WBGene00000466	cel-1	99	40.448	Caenorhabditis_elegans
ENSCSAVG00000009934	-	99	60.573	ENSCJAG00000000780	RNGTT	93	60.573	Callithrix_jacchus
ENSCSAVG00000009934	-	99	60.753	ENSCAFG00000003089	RNGTT	94	60.413	Canis_familiaris
ENSCSAVG00000009934	-	99	60.753	ENSCAFG00020015945	RNGTT	93	60.753	Canis_lupus_dingo
ENSCSAVG00000009934	-	99	60.394	ENSCHIG00000018488	RNGTT	94	60.394	Capra_hircus
ENSCSAVG00000009934	-	96	59.074	ENSTSYG00000006886	RNGTT	90	59.074	Carlito_syrichta
ENSCSAVG00000009934	-	92	54.667	ENSCAPG00000012521	RNGTT	93	47.955	Cavia_aperea
ENSCSAVG00000009934	-	99	55.893	ENSCPOG00000005124	RNGTT	94	55.893	Cavia_porcellus
ENSCSAVG00000009934	-	99	60.573	ENSCCAG00000030653	RNGTT	93	60.573	Cebus_capucinus
ENSCSAVG00000009934	-	99	60.573	ENSCATG00000045048	RNGTT	93	60.573	Cercocebus_atys
ENSCSAVG00000009934	-	99	60.036	ENSCLAG00000010675	RNGTT	93	60.036	Chinchilla_lanigera
ENSCSAVG00000009934	-	99	60.573	ENSCSAG00000017333	RNGTT	93	60.573	Chlorocebus_sabaeus
ENSCSAVG00000009934	-	96	44.630	ENSCHOG00000005246	RNGTT	94	44.630	Choloepus_hoffmanni
ENSCSAVG00000009934	-	99	58.792	ENSCPBG00000019915	RNGTT	97	57.904	Chrysemys_picta_bellii
ENSCSAVG00000009934	-	99	87.612	ENSCING00000001150	-	93	87.612	Ciona_intestinalis
ENSCSAVG00000009934	-	99	60.573	ENSCANG00000037275	RNGTT	93	60.573	Colobus_angolensis_palliatus
ENSCSAVG00000009934	-	99	60.394	ENSCGRG00001023707	-	93	60.394	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009934	-	99	54.306	ENSCGRG00001013438	-	93	56.351	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009934	-	99	53.954	ENSCGRG00000010662	-	93	55.993	Cricetulus_griseus_crigri
ENSCSAVG00000009934	-	96	60.000	ENSCGRG00000012687	-	94	60.000	Cricetulus_griseus_crigri
ENSCSAVG00000009934	-	99	58.082	ENSCSEG00000004052	rngtt	94	58.615	Cynoglossus_semilaevis
ENSCSAVG00000009934	-	99	59.358	ENSCVAG00000002956	rngtt	93	60.963	Cyprinodon_variegatus
ENSCSAVG00000009934	-	99	58.834	ENSDARG00000032261	rngtt	94	59.858	Danio_rerio
ENSCSAVG00000009934	-	99	60.573	ENSDNOG00000032165	RNGTT	89	60.573	Dasypus_novemcinctus
ENSCSAVG00000009934	-	99	60.394	ENSDORG00000011171	Rngtt	93	60.394	Dipodomys_ordii
ENSCSAVG00000009934	-	100	45.896	FBgn0030556	mRNA-cap	91	45.896	Drosophila_melanogaster
ENSCSAVG00000009934	-	96	58.519	ENSETEG00000018008	RNGTT	94	58.519	Echinops_telfairi
ENSCSAVG00000009934	-	51	62.500	ENSEBUG00000005986	rngtt	61	58.654	Eptatretus_burgeri
ENSCSAVG00000009934	-	99	60.573	ENSEASG00005005683	RNGTT	93	60.573	Equus_asinus_asinus
ENSCSAVG00000009934	-	99	60.573	ENSECAG00000012605	RNGTT	93	60.573	Equus_caballus
ENSCSAVG00000009934	-	72	68.675	ENSEEUG00000011671	RNGTT	69	68.675	Erinaceus_europaeus
ENSCSAVG00000009934	-	99	57.699	ENSELUG00000017127	rngtt	94	58.938	Esox_lucius
ENSCSAVG00000009934	-	99	60.573	ENSFCAG00000030695	RNGTT	93	60.573	Felis_catus
ENSCSAVG00000009934	-	99	60.676	ENSFALG00000002963	RNGTT	94	61.032	Ficedula_albicollis
ENSCSAVG00000009934	-	99	59.857	ENSFDAG00000008903	RNGTT	93	59.857	Fukomys_damarensis
ENSCSAVG00000009934	-	99	58.792	ENSFHEG00000020946	rngtt	93	60.142	Fundulus_heteroclitus
ENSCSAVG00000009934	-	99	59.893	ENSGALG00000015787	RNGTT	94	60.498	Gallus_gallus
ENSCSAVG00000009934	-	99	58.407	ENSGAFG00000001721	rngtt	93	58.038	Gambusia_affinis
ENSCSAVG00000009934	-	99	57.067	ENSGACG00000008281	rngtt	92	58.541	Gasterosteus_aculeatus
ENSCSAVG00000009934	-	99	58.792	ENSGAGG00000016170	RNGTT	94	58.792	Gopherus_agassizii
ENSCSAVG00000009934	-	99	60.573	ENSGGOG00000007863	RNGTT	94	59.893	Gorilla_gorilla
ENSCSAVG00000009934	-	99	59.115	ENSHBUG00000023823	rngtt	94	59.541	Haplochromis_burtoni
ENSCSAVG00000009934	-	99	59.857	ENSHGLG00000001236	RNGTT	93	59.857	Heterocephalus_glaber_female
ENSCSAVG00000009934	-	99	59.857	ENSHGLG00100003913	RNGTT	93	59.857	Heterocephalus_glaber_male
ENSCSAVG00000009934	-	99	58.333	ENSHCOG00000007195	rngtt	94	59.150	Hippocampus_comes
ENSCSAVG00000009934	-	99	58.571	ENSIPUG00000007731	rngtt	94	59.715	Ictalurus_punctatus
ENSCSAVG00000009934	-	99	60.573	ENSSTOG00000007145	RNGTT	93	60.573	Ictidomys_tridecemlineatus
ENSCSAVG00000009934	-	99	60.503	ENSJJAG00000019822	Rngtt	93	60.503	Jaculus_jaculus
ENSCSAVG00000009934	-	99	59.180	ENSKMAG00000019710	rngtt	93	59.609	Kryptolebias_marmoratus
ENSCSAVG00000009934	-	96	58.394	ENSLBEG00000012044	rngtt	94	58.288	Labrus_bergylta
ENSCSAVG00000009934	-	99	59.364	ENSLOCG00000016935	rngtt	94	60.317	Lepisosteus_oculatus
ENSCSAVG00000009934	-	99	60.394	ENSLAFG00000008130	RNGTT	93	60.394	Loxodonta_africana
ENSCSAVG00000009934	-	88	58.835	ENSMFAG00000030988	RNGTT	91	58.835	Macaca_fascicularis
ENSCSAVG00000009934	-	92	51.815	ENSMMUG00000020097	RNGTT	99	49.894	Macaca_mulatta
ENSCSAVG00000009934	-	99	60.573	ENSMNEG00000040764	RNGTT	93	60.573	Macaca_nemestrina
ENSCSAVG00000009934	-	99	60.573	ENSMLEG00000036501	RNGTT	93	60.573	Mandrillus_leucophaeus
ENSCSAVG00000009934	-	99	59.002	ENSMAMG00000003970	rngtt	93	63.077	Mastacembelus_armatus
ENSCSAVG00000009934	-	99	59.115	ENSMZEG00005002182	rngtt	94	59.541	Maylandia_zebra
ENSCSAVG00000009934	-	96	59.707	ENSMGAG00000013663	RNGTT	94	60.256	Meleagris_gallopavo
ENSCSAVG00000009934	-	99	60.215	ENSMAUG00000021153	Rngtt	93	60.215	Mesocricetus_auratus
ENSCSAVG00000009934	-	99	60.573	ENSMICG00000006070	RNGTT	99	58.635	Microcebus_murinus
ENSCSAVG00000009934	-	99	55.696	ENSMOCG00000000920	Rngtt	91	61.473	Microtus_ochrogaster
ENSCSAVG00000009934	-	99	57.961	ENSMMOG00000015633	rngtt	93	57.857	Mola_mola
ENSCSAVG00000009934	-	99	59.857	ENSMODG00000018289	-	93	59.857	Monodelphis_domestica
ENSCSAVG00000009934	-	99	56.684	ENSMALG00000022213	rngtt	93	57.932	Monopterus_albus
ENSCSAVG00000009934	-	99	60.573	MGP_CAROLIEiJ_G0025875	Rngtt	93	60.573	Mus_caroli
ENSCSAVG00000009934	-	99	60.394	ENSMUSG00000028274	Rngtt	93	60.394	Mus_musculus
ENSCSAVG00000009934	-	99	60.573	MGP_PahariEiJ_G0023998	Rngtt	93	60.573	Mus_pahari
ENSCSAVG00000009934	-	99	60.394	MGP_SPRETEiJ_G0026824	Rngtt	93	60.394	Mus_spretus
ENSCSAVG00000009934	-	99	60.573	ENSMPUG00000009351	RNGTT	93	60.573	Mustela_putorius_furo
ENSCSAVG00000009934	-	84	58.774	ENSMLUG00000003302	RNGTT	99	58.774	Myotis_lucifugus
ENSCSAVG00000009934	-	99	59.140	ENSNGAG00000021517	Rngtt	93	59.140	Nannospalax_galili
ENSCSAVG00000009934	-	99	59.292	ENSNBRG00000022540	rngtt	94	59.717	Neolamprologus_brichardi
ENSCSAVG00000009934	-	99	60.573	ENSNLEG00000013064	RNGTT	93	60.573	Nomascus_leucogenys
ENSCSAVG00000009934	-	50	44.828	ENSMEUG00000004467	-	77	50.000	Notamacropus_eugenii
ENSCSAVG00000009934	-	96	59.444	ENSOPRG00000000916	RNGTT	94	59.444	Ochotona_princeps
ENSCSAVG00000009934	-	99	60.573	ENSODEG00000007302	RNGTT	93	60.573	Octodon_degus
ENSCSAVG00000009934	-	99	59.469	ENSONIG00000005870	rngtt	94	60.071	Oreochromis_niloticus
ENSCSAVG00000009934	-	95	59.850	ENSOANG00000000533	RNGTT	94	59.850	Ornithorhynchus_anatinus
ENSCSAVG00000009934	-	99	60.394	ENSOCUG00000017081	RNGTT	93	60.394	Oryctolagus_cuniculus
ENSCSAVG00000009934	-	99	58.467	ENSORLG00000011486	rngtt	93	59.075	Oryzias_latipes
ENSCSAVG00000009934	-	99	58.467	ENSORLG00020017311	rngtt	93	59.075	Oryzias_latipes_hni
ENSCSAVG00000009934	-	99	58.289	ENSORLG00015000359	rngtt	93	58.897	Oryzias_latipes_hsok
ENSCSAVG00000009934	-	99	59.537	ENSOMEG00000022737	rngtt	93	59.431	Oryzias_melastigma
ENSCSAVG00000009934	-	75	57.820	ENSOGAG00000001690	RNGTT	99	57.820	Otolemur_garnettii
ENSCSAVG00000009934	-	96	60.148	ENSOARG00000012911	RNGTT	94	60.148	Ovis_aries
ENSCSAVG00000009934	-	99	60.573	ENSPPAG00000024828	RNGTT	99	55.960	Pan_paniscus
ENSCSAVG00000009934	-	99	60.573	ENSPPRG00000000245	RNGTT	93	60.573	Panthera_pardus
ENSCSAVG00000009934	-	99	60.573	ENSPTIG00000005384	RNGTT	93	60.573	Panthera_tigris_altaica
ENSCSAVG00000009934	-	99	60.573	ENSPTRG00000018413	RNGTT	93	60.573	Pan_troglodytes
ENSCSAVG00000009934	-	99	60.573	ENSPANG00000010454	RNGTT	93	60.573	Papio_anubis
ENSCSAVG00000009934	-	99	57.904	ENSPKIG00000017946	rngtt	94	59.220	Paramormyrops_kingsleyae
ENSCSAVG00000009934	-	96	59.415	ENSPSIG00000010976	RNGTT	94	59.415	Pelodiscus_sinensis
ENSCSAVG00000009934	-	85	64.615	ENSPMGG00000013700	rngtt	93	64.615	Periophthalmus_magnuspinnatus
ENSCSAVG00000009934	-	99	60.394	ENSPEMG00000018487	Rngtt	93	60.394	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009934	-	95	52.514	ENSPMAG00000005449	rngtt	93	55.621	Petromyzon_marinus
ENSCSAVG00000009934	-	99	59.498	ENSPCIG00000021711	RNGTT	98	58.564	Phascolarctos_cinereus
ENSCSAVG00000009934	-	99	58.824	ENSPFOG00000018533	rngtt	93	59.680	Poecilia_formosa
ENSCSAVG00000009934	-	99	58.824	ENSPLAG00000019396	rngtt	93	59.680	Poecilia_latipinna
ENSCSAVG00000009934	-	99	58.645	ENSPMEG00000012393	rngtt	93	59.503	Poecilia_mexicana
ENSCSAVG00000009934	-	99	58.792	ENSPREG00000009255	rngtt	93	59.858	Poecilia_reticulata
ENSCSAVG00000009934	-	89	60.040	ENSPPYG00000016834	RNGTT	94	60.040	Pongo_abelii
ENSCSAVG00000009934	-	53	69.565	ENSPCAG00000014598	-	59	48.416	Procavia_capensis
ENSCSAVG00000009934	-	99	60.394	ENSPCOG00000017200	RNGTT	93	60.394	Propithecus_coquereli
ENSCSAVG00000009934	-	99	55.018	ENSPVAG00000017371	RNGTT	93	55.018	Pteropus_vampyrus
ENSCSAVG00000009934	-	99	59.115	ENSPNYG00000023388	rngtt	94	59.541	Pundamilia_nyererei
ENSCSAVG00000009934	-	99	59.358	ENSPNAG00000004948	rngtt	97	59.347	Pygocentrus_nattereri
ENSCSAVG00000009934	-	99	60.394	ENSRNOG00000007867	Rngtt	93	60.394	Rattus_norvegicus
ENSCSAVG00000009934	-	99	60.394	ENSRBIG00000031371	RNGTT	93	60.394	Rhinopithecus_bieti
ENSCSAVG00000009934	-	99	60.394	ENSRROG00000030932	RNGTT	99	58.400	Rhinopithecus_roxellana
ENSCSAVG00000009934	-	96	58.741	ENSSBOG00000021985	RNGTT	93	64.286	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009934	-	95	58.912	ENSSHAG00000010187	RNGTT	94	58.912	Sarcophilus_harrisii
ENSCSAVG00000009934	-	99	60.606	ENSSFOG00015021884	rngtt	94	60.854	Scleropages_formosus
ENSCSAVG00000009934	-	99	58.185	ENSSMAG00000001713	rngtt	93	58.792	Scophthalmus_maximus
ENSCSAVG00000009934	-	99	58.824	ENSSDUG00000004268	rngtt	93	59.075	Seriola_dumerili
ENSCSAVG00000009934	-	99	58.824	ENSSLDG00000024223	rngtt	93	59.075	Seriola_lalandi_dorsalis
ENSCSAVG00000009934	-	79	71.084	ENSSARG00000010486	RNGTT	83	71.084	Sorex_araneus
ENSCSAVG00000009934	-	99	58.615	ENSSPUG00000001154	RNGTT	94	58.792	Sphenodon_punctatus
ENSCSAVG00000009934	-	99	59.107	ENSSPAG00000013510	rngtt	93	63.077	Stegastes_partitus
ENSCSAVG00000009934	-	99	60.394	ENSSSCG00000004311	RNGTT	98	58.167	Sus_scrofa
ENSCSAVG00000009934	-	99	60.320	ENSTGUG00000012427	RNGTT	94	60.676	Taeniopygia_guttata
ENSCSAVG00000009934	-	99	59.002	ENSTRUG00000017802	rngtt	94	59.180	Takifugu_rubripes
ENSCSAVG00000009934	-	99	59.075	ENSTNIG00000016410	rngtt	94	59.075	Tetraodon_nigroviridis
ENSCSAVG00000009934	-	99	50.000	ENSTBEG00000000862	RNGTT	85	59.821	Tupaia_belangeri
ENSCSAVG00000009934	-	86	65.714	ENSTTRG00000013936	RNGTT	83	65.714	Tursiops_truncatus
ENSCSAVG00000009934	-	61	53.757	ENSUAMG00000008784	RNGTT	93	54.572	Ursus_americanus
ENSCSAVG00000009934	-	99	60.573	ENSUMAG00000010518	RNGTT	93	60.573	Ursus_maritimus
ENSCSAVG00000009934	-	99	58.961	ENSVPAG00000004172	RNGTT	93	58.961	Vicugna_pacos
ENSCSAVG00000009934	-	99	60.753	ENSVVUG00000010152	RNGTT	93	60.753	Vulpes_vulpes
ENSCSAVG00000009934	-	99	59.609	ENSXETG00000005384	rngtt	94	59.609	Xenopus_tropicalis
ENSCSAVG00000009934	-	74	51.288	ENSXCOG00000001703	rngtt	83	53.066	Xiphophorus_couchianus
ENSCSAVG00000009934	-	99	58.481	ENSXMAG00000016967	rngtt	93	59.858	Xiphophorus_maculatus