EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009982 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 1709 bases
Position: chrreftig_14:448525-450233
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016967	Sua5_yciO_yrdC	PF01300.18	5.2e-40	1	1
ENSCSAVP00000016968	Sua5_yciO_yrdC	PF01300.18	4.4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017150	-	642	-	ENSCSAVP00000016967	213 (aa)	-	H2ZHA1
ENSCSAVT00000017151	-	1026	-	ENSCSAVP00000016968	269 (aa)	-	H2ZHA2

Gene Model

Click here to download ENSCSAVG00000009982's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009982's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009982	-	98	47.867	ENSG00000196449	YRDC	73	47.867	Homo_sapiens
ENSCSAVG00000009982	-	98	47.867	ENSAPOG00000024293	yrdc	77	47.867	Acanthochromis_polyacanthus
ENSCSAVG00000009982	-	88	51.579	ENSAMEG00000001173	YRDC	97	51.579	Ailuropoda_melanoleuca
ENSCSAVG00000009982	-	98	47.867	ENSACIG00000017330	yrdc	75	47.867	Amphilophus_citrinellus
ENSCSAVG00000009982	-	98	48.341	ENSAOCG00000021647	yrdc	77	48.341	Amphiprion_ocellaris
ENSCSAVG00000009982	-	98	48.341	ENSAPEG00000006164	yrdc	77	48.341	Amphiprion_percula
ENSCSAVG00000009982	-	99	47.418	ENSATEG00000010086	yrdc	76	47.418	Anabas_testudineus
ENSCSAVG00000009982	-	92	48.744	ENSACAG00000017203	YRDC	92	48.515	Anolis_carolinensis
ENSCSAVG00000009982	-	98	45.540	ENSANAG00000031052	-	75	45.540	Aotus_nancymaae
ENSCSAVG00000009982	-	97	47.619	ENSANAG00000028788	-	86	47.619	Aotus_nancymaae
ENSCSAVG00000009982	-	98	46.411	ENSACLG00000027775	yrdc	75	48.341	Astatotilapia_calliptera
ENSCSAVG00000009982	-	97	47.368	ENSAMXG00000037791	yrdc	76	47.368	Astyanax_mexicanus
ENSCSAVG00000009982	-	98	47.393	ENSBTAG00000006510	YRDC	74	47.393	Bos_taurus
ENSCSAVG00000009982	-	98	37.089	WBGene00012997	Y48C3A.18	95	37.097	Caenorhabditis_elegans
ENSCSAVG00000009982	-	98	47.867	ENSCJAG00000002078	YRDC	56	47.867	Callithrix_jacchus
ENSCSAVG00000009982	-	98	48.095	ENSCAFG00000003253	YRDC	74	48.095	Canis_familiaris
ENSCSAVG00000009982	-	98	48.571	ENSCAFG00020007843	YRDC	74	48.571	Canis_lupus_dingo
ENSCSAVG00000009982	-	98	46.919	ENSCHIG00000007882	YRDC	74	46.919	Capra_hircus
ENSCSAVG00000009982	-	82	48.023	ENSTSYG00000005555	YRDC	61	48.023	Carlito_syrichta
ENSCSAVG00000009982	-	98	44.550	ENSCPOG00000036144	YRDC	73	44.550	Cavia_porcellus
ENSCSAVG00000009982	-	98	47.867	ENSCCAG00000028891	YRDC	73	47.867	Cebus_capucinus
ENSCSAVG00000009982	-	98	48.341	ENSCATG00000036928	YRDC	73	48.341	Cercocebus_atys
ENSCSAVG00000009982	-	92	49.246	ENSCLAG00000015012	YRDC	73	46.919	Chinchilla_lanigera
ENSCSAVG00000009982	-	98	48.341	ENSCSAG00000001116	YRDC	73	48.341	Chlorocebus_sabaeus
ENSCSAVG00000009982	-	66	50.350	ENSCHOG00000005500	YRDC	67	50.350	Choloepus_hoffmanni
ENSCSAVG00000009982	-	98	46.226	ENSCPBG00000018446	YRDC	88	46.226	Chrysemys_picta_bellii
ENSCSAVG00000009982	-	100	86.977	ENSCING00000007564	-	100	86.977	Ciona_intestinalis
ENSCSAVG00000009982	-	98	47.393	ENSCANG00000031111	YRDC	73	47.393	Colobus_angolensis_palliatus
ENSCSAVG00000009982	-	98	46.445	ENSCGRG00001014496	-	73	46.445	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009982	-	87	46.032	ENSCGRG00001000829	-	52	46.032	Cricetulus_griseus_chok1gshd
ENSCSAVG00000009982	-	58	47.967	ENSCGRG00000001307	-	93	47.967	Cricetulus_griseus_crigri
ENSCSAVG00000009982	-	98	49.048	ENSCSEG00000019075	yrdc	74	49.048	Cynoglossus_semilaevis
ENSCSAVG00000009982	-	98	48.571	ENSCVAG00000017355	yrdc	76	48.571	Cyprinodon_variegatus
ENSCSAVG00000009982	-	98	43.541	ENSDARG00000041428	yrdc	85	43.541	Danio_rerio
ENSCSAVG00000009982	-	93	35.323	ENSDNOG00000036198	-	95	35.323	Dasypus_novemcinctus
ENSCSAVG00000009982	-	98	46.919	ENSDNOG00000038789	-	73	46.919	Dasypus_novemcinctus
ENSCSAVG00000009982	-	91	50.510	ENSDORG00000008788	Yrdc	84	50.510	Dipodomys_ordii
ENSCSAVG00000009982	-	99	44.700	FBgn0061361	CG33786	83	44.700	Drosophila_melanogaster
ENSCSAVG00000009982	-	98	37.799	ENSETEG00000003442	YRDC	73	37.799	Echinops_telfairi
ENSCSAVG00000009982	-	94	48.039	ENSEBUG00000014080	yrdc	81	48.039	Eptatretus_burgeri
ENSCSAVG00000009982	-	98	47.170	ENSEASG00005012253	YRDC	73	47.170	Equus_asinus_asinus
ENSCSAVG00000009982	-	98	47.170	ENSECAG00000022522	YRDC	73	47.170	Equus_caballus
ENSCSAVG00000009982	-	98	47.867	ENSELUG00000018071	yrdc	66	47.867	Esox_lucius
ENSCSAVG00000009982	-	98	48.815	ENSFCAG00000011018	YRDC	73	48.815	Felis_catus
ENSCSAVG00000009982	-	91	51.020	ENSFALG00000000964	YRDC	88	51.256	Ficedula_albicollis
ENSCSAVG00000009982	-	51	50.459	ENSFDAG00000016507	-	99	50.459	Fukomys_damarensis
ENSCSAVG00000009982	-	98	47.393	ENSFHEG00000001029	yrdc	75	47.179	Fundulus_heteroclitus
ENSCSAVG00000009982	-	98	47.393	ENSGMOG00000015635	yrdc	97	47.393	Gadus_morhua
ENSCSAVG00000009982	-	98	47.867	ENSGALG00000029001	YRDC	80	47.642	Gallus_gallus
ENSCSAVG00000009982	-	91	30.144	ENSGALG00000025899	-	66	30.144	Gallus_gallus
ENSCSAVG00000009982	-	98	47.867	ENSGAFG00000008396	yrdc	75	47.867	Gambusia_affinis
ENSCSAVG00000009982	-	98	46.226	ENSGACG00000013878	yrdc	84	46.226	Gasterosteus_aculeatus
ENSCSAVG00000009982	-	98	48.113	ENSGAGG00000014968	YRDC	89	48.113	Gopherus_agassizii
ENSCSAVG00000009982	-	98	47.867	ENSGGOG00000007619	YRDC	73	47.867	Gorilla_gorilla
ENSCSAVG00000009982	-	98	46.411	ENSHBUG00000009298	yrdc	75	48.341	Haplochromis_burtoni
ENSCSAVG00000009982	-	98	46.919	ENSHGLG00000014075	YRDC	73	46.919	Heterocephalus_glaber_female
ENSCSAVG00000009982	-	97	47.143	ENSHGLG00100002734	YRDC	73	47.143	Heterocephalus_glaber_male
ENSCSAVG00000009982	-	93	47.264	ENSHCOG00000006598	yrdc	76	47.264	Hippocampus_comes
ENSCSAVG00000009982	-	97	48.095	ENSIPUG00000014985	yrdc	82	48.095	Ictalurus_punctatus
ENSCSAVG00000009982	-	98	48.815	ENSSTOG00000001643	YRDC	73	48.815	Ictidomys_tridecemlineatus
ENSCSAVG00000009982	-	51	49.541	ENSJJAG00000023117	-	99	49.541	Jaculus_jaculus
ENSCSAVG00000009982	-	98	47.393	ENSKMAG00000013468	yrdc	75	47.393	Kryptolebias_marmoratus
ENSCSAVG00000009982	-	98	47.867	ENSLBEG00000027501	yrdc	75	47.867	Labrus_bergylta
ENSCSAVG00000009982	-	74	35.465	ENSLACG00000017624	si:ch211-153b23.3	53	35.465	Latimeria_chalumnae
ENSCSAVG00000009982	-	99	48.131	ENSLACG00000010689	YRDC	95	48.131	Latimeria_chalumnae
ENSCSAVG00000009982	-	99	45.755	ENSLOCG00000003321	yrdc	85	45.755	Lepisosteus_oculatus
ENSCSAVG00000009982	-	98	48.341	ENSLAFG00000017556	YRDC	73	48.341	Loxodonta_africana
ENSCSAVG00000009982	-	98	48.341	ENSMFAG00000003487	YRDC	96	48.341	Macaca_fascicularis
ENSCSAVG00000009982	-	98	48.341	ENSMMUG00000005372	YRDC	54	48.341	Macaca_mulatta
ENSCSAVG00000009982	-	98	48.341	ENSMNEG00000029348	YRDC	73	48.341	Macaca_nemestrina
ENSCSAVG00000009982	-	70	52.000	ENSMLEG00000041122	YRDC	95	52.000	Mandrillus_leucophaeus
ENSCSAVG00000009982	-	99	47.418	ENSMAMG00000007315	yrdc	75	47.418	Mastacembelus_armatus
ENSCSAVG00000009982	-	98	46.411	ENSMZEG00005006948	yrdc	75	48.341	Maylandia_zebra
ENSCSAVG00000009982	-	96	49.029	ENSMGAG00000002833	YRDC	98	49.029	Meleagris_gallopavo
ENSCSAVG00000009982	-	87	31.000	ENSMGAG00000005489	-	50	31.000	Meleagris_gallopavo
ENSCSAVG00000009982	-	51	47.706	ENSMAUG00000003715	-	99	47.706	Mesocricetus_auratus
ENSCSAVG00000009982	-	98	47.393	ENSMICG00000031688	YRDC	73	47.393	Microcebus_murinus
ENSCSAVG00000009982	-	66	48.252	ENSMOCG00000000164	-	55	48.252	Microtus_ochrogaster
ENSCSAVG00000009982	-	98	47.847	ENSMMOG00000002119	yrdc	76	47.847	Mola_mola
ENSCSAVG00000009982	-	98	48.113	ENSMODG00000017750	YRDC	73	48.113	Monodelphis_domestica
ENSCSAVG00000009982	-	98	48.815	ENSMALG00000012471	yrdc	77	48.815	Monopterus_albus
ENSCSAVG00000009982	-	90	47.179	MGP_CAROLIEiJ_G0026453	Yrdc	97	49.533	Mus_caroli
ENSCSAVG00000009982	-	98	47.867	ENSMUSG00000028889	Yrdc	99	49.541	Mus_musculus
ENSCSAVG00000009982	-	98	47.867	MGP_PahariEiJ_G0028784	Yrdc	99	49.541	Mus_pahari
ENSCSAVG00000009982	-	98	47.867	MGP_SPRETEiJ_G0027432	Yrdc	73	47.867	Mus_spretus
ENSCSAVG00000009982	-	97	49.524	ENSMPUG00000014542	YRDC	81	49.524	Mustela_putorius_furo
ENSCSAVG00000009982	-	96	44.660	ENSMLUG00000024310	-	98	44.660	Myotis_lucifugus
ENSCSAVG00000009982	-	98	38.095	ENSMLUG00000028796	-	73	38.095	Myotis_lucifugus
ENSCSAVG00000009982	-	98	47.393	ENSMLUG00000000955	-	73	47.393	Myotis_lucifugus
ENSCSAVG00000009982	-	98	46.226	ENSNGAG00000019099	Yrdc	73	46.226	Nannospalax_galili
ENSCSAVG00000009982	-	98	48.341	ENSNBRG00000009475	yrdc	75	48.341	Neolamprologus_brichardi
ENSCSAVG00000009982	-	98	47.867	ENSNLEG00000011665	YRDC	73	47.867	Nomascus_leucogenys
ENSCSAVG00000009982	-	98	48.585	ENSMEUG00000005068	YRDC	95	48.585	Notamacropus_eugenii
ENSCSAVG00000009982	-	98	48.341	ENSODEG00000007401	YRDC	99	50.459	Octodon_degus
ENSCSAVG00000009982	-	98	46.890	ENSONIG00000016213	yrdc	84	48.815	Oreochromis_niloticus
ENSCSAVG00000009982	-	55	41.880	ENSOANG00000002048	-	88	41.880	Ornithorhynchus_anatinus
ENSCSAVG00000009982	-	98	46.226	ENSOCUG00000005384	YRDC	70	46.226	Oryctolagus_cuniculus
ENSCSAVG00000009982	-	98	46.226	ENSORLG00000014393	yrdc	76	46.226	Oryzias_latipes
ENSCSAVG00000009982	-	98	46.698	ENSORLG00020019663	yrdc	76	46.698	Oryzias_latipes_hni
ENSCSAVG00000009982	-	98	45.755	ENSORLG00015004625	yrdc	76	45.755	Oryzias_latipes_hsok
ENSCSAVG00000009982	-	98	46.226	ENSOMEG00000018550	yrdc	77	46.226	Oryzias_melastigma
ENSCSAVG00000009982	-	98	46.919	ENSOGAG00000030474	YRDC	74	46.919	Otolemur_garnettii
ENSCSAVG00000009982	-	98	46.919	ENSOARG00000019873	YRDC	73	46.919	Ovis_aries
ENSCSAVG00000009982	-	67	52.448	ENSPPAG00000039722	-	92	52.448	Pan_paniscus
ENSCSAVG00000009982	-	98	48.815	ENSPPRG00000007752	YRDC	73	48.815	Panthera_pardus
ENSCSAVG00000009982	-	72	51.299	ENSPTIG00000019821	YRDC	64	51.299	Panthera_tigris_altaica
ENSCSAVG00000009982	-	98	47.867	ENSPTRG00000000557	YRDC	73	47.867	Pan_troglodytes
ENSCSAVG00000009982	-	98	48.341	ENSPANG00000006487	YRDC	55	48.341	Papio_anubis
ENSCSAVG00000009982	-	98	49.528	ENSPKIG00000004574	yrdc	74	49.528	Paramormyrops_kingsleyae
ENSCSAVG00000009982	-	98	46.919	ENSPSIG00000006483	YRDC	72	46.919	Pelodiscus_sinensis
ENSCSAVG00000009982	-	98	49.524	ENSPMGG00000004184	yrdc	78	49.524	Periophthalmus_magnuspinnatus
ENSCSAVG00000009982	-	83	46.927	ENSPEMG00000016985	Yrdc	76	46.703	Peromyscus_maniculatus_bairdii
ENSCSAVG00000009982	-	85	47.283	ENSPMAG00000002905	yrdc	96	47.283	Petromyzon_marinus
ENSCSAVG00000009982	-	98	47.642	ENSPCIG00000025731	YRDC	73	47.642	Phascolarctos_cinereus
ENSCSAVG00000009982	-	98	48.095	ENSPFOG00000023097	yrdc	75	48.095	Poecilia_formosa
ENSCSAVG00000009982	-	98	48.571	ENSPLAG00000020882	yrdc	75	48.571	Poecilia_latipinna
ENSCSAVG00000009982	-	98	48.095	ENSPMEG00000013237	yrdc	75	48.095	Poecilia_mexicana
ENSCSAVG00000009982	-	98	48.095	ENSPREG00000005285	yrdc	75	48.095	Poecilia_reticulata
ENSCSAVG00000009982	-	98	47.867	ENSPPYG00000001523	-	84	47.867	Pongo_abelii
ENSCSAVG00000009982	-	98	48.341	ENSPCAG00000016850	YRDC	73	48.341	Procavia_capensis
ENSCSAVG00000009982	-	98	47.393	ENSPCOG00000013214	YRDC	73	47.393	Propithecus_coquereli
ENSCSAVG00000009982	-	98	47.867	ENSPVAG00000010147	YRDC	73	47.867	Pteropus_vampyrus
ENSCSAVG00000009982	-	98	46.890	ENSPNYG00000013956	yrdc	75	48.815	Pundamilia_nyererei
ENSCSAVG00000009982	-	90	49.741	ENSPNAG00000015625	yrdc	76	49.741	Pygocentrus_nattereri
ENSCSAVG00000009982	-	98	46.919	ENSRNOG00000025424	Yrdc	73	46.919	Rattus_norvegicus
ENSCSAVG00000009982	-	98	47.867	ENSRBIG00000032289	YRDC	73	47.867	Rhinopithecus_bieti
ENSCSAVG00000009982	-	97	48.095	ENSRROG00000039370	YRDC	69	48.095	Rhinopithecus_roxellana
ENSCSAVG00000009982	-	98	48.341	ENSSBOG00000018937	YRDC	87	48.341	Saimiri_boliviensis_boliviensis
ENSCSAVG00000009982	-	71	49.669	ENSSHAG00000013957	-	97	49.669	Sarcophilus_harrisii
ENSCSAVG00000009982	-	97	50.000	ENSSFOG00015006128	yrdc	87	50.000	Scleropages_formosus
ENSCSAVG00000009982	-	98	48.341	ENSSMAG00000005195	yrdc	76	48.341	Scophthalmus_maximus
ENSCSAVG00000009982	-	60	35.036	ENSSDUG00000006631	-	64	34.351	Seriola_dumerili
ENSCSAVG00000009982	-	65	35.135	ENSSDUG00000006736	-	76	35.135	Seriola_dumerili
ENSCSAVG00000009982	-	98	46.411	ENSSDUG00000009775	yrdc	75	48.341	Seriola_dumerili
ENSCSAVG00000009982	-	98	46.411	ENSSLDG00000003196	yrdc	75	48.341	Seriola_lalandi_dorsalis
ENSCSAVG00000009982	-	60	34.351	ENSSLDG00000008694	-	64	34.351	Seriola_lalandi_dorsalis
ENSCSAVG00000009982	-	99	48.131	ENSSPUG00000003946	YRDC	80	48.131	Sphenodon_punctatus
ENSCSAVG00000009982	-	98	47.393	ENSSPAG00000012559	yrdc	75	47.393	Stegastes_partitus
ENSCSAVG00000009982	-	98	47.393	ENSSSCG00000040425	YRDC	73	47.393	Sus_scrofa
ENSCSAVG00000009982	-	63	51.493	ENSTGUG00000001507	YRDC	88	51.493	Taeniopygia_guttata
ENSCSAVG00000009982	-	94	45.588	ENSTRUG00000005923	yrdc	80	41.176	Takifugu_rubripes
ENSCSAVG00000009982	-	76	48.171	ENSTBEG00000008863	YRDC	100	48.171	Tupaia_belangeri
ENSCSAVG00000009982	-	68	52.083	ENSTTRG00000013538	-	93	52.083	Tursiops_truncatus
ENSCSAVG00000009982	-	93	51.485	ENSUAMG00000006150	YRDC	96	51.485	Ursus_americanus
ENSCSAVG00000009982	-	98	36.842	ENSVPAG00000006642	YRDC	87	36.842	Vicugna_pacos
ENSCSAVG00000009982	-	66	53.901	ENSVVUG00000023132	-	54	43.529	Vulpes_vulpes
ENSCSAVG00000009982	-	98	50.472	ENSXETG00000014420	yrdc	86	50.472	Xenopus_tropicalis
ENSCSAVG00000009982	-	98	47.867	ENSXCOG00000000829	yrdc	84	47.867	Xiphophorus_couchianus
ENSCSAVG00000009982	-	98	46.190	ENSXMAG00000014606	yrdc	71	46.190	Xiphophorus_maculatus