EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009987 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6678 bases
Position: chrreftig_14:452860-459537
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016975	MMR_HSR1	PF01926.23	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017158	-	2060	-	ENSCSAVP00000016975	448 (aa)	-	H2ZHA9

Gene Model

Click here to download ENSCSAVG00000009987's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009987	-	100	58.444	ENSAPOG00000018833	si:ch211-11k18.4	99	58.444	Acanthochromis_polyacanthus
ENSCSAVG00000009987	-	98	56.136	ENSAPOG00000010378	si:dkey-98f17.5	98	55.682	Acanthochromis_polyacanthus
ENSCSAVG00000009987	-	98	56.591	ENSACIG00000017719	si:dkey-98f17.5	98	56.364	Amphilophus_citrinellus
ENSCSAVG00000009987	-	100	57.080	ENSACIG00000006696	si:ch211-11k18.4	99	57.080	Amphilophus_citrinellus
ENSCSAVG00000009987	-	98	56.364	ENSAOCG00000008661	si:dkey-98f17.5	98	55.909	Amphiprion_ocellaris
ENSCSAVG00000009987	-	100	58.667	ENSAOCG00000014284	si:ch211-11k18.4	99	58.667	Amphiprion_ocellaris
ENSCSAVG00000009987	-	98	56.136	ENSAPEG00000022447	si:dkey-98f17.5	98	55.682	Amphiprion_percula
ENSCSAVG00000009987	-	100	58.667	ENSAPEG00000014910	si:ch211-11k18.4	99	58.667	Amphiprion_percula
ENSCSAVG00000009987	-	98	56.136	ENSATEG00000007188	si:dkey-98f17.5	98	55.909	Anabas_testudineus
ENSCSAVG00000009987	-	100	58.667	ENSATEG00000004775	si:ch211-11k18.4	99	58.667	Anabas_testudineus
ENSCSAVG00000009987	-	99	55.705	ENSACAG00000028632	-	98	55.778	Anolis_carolinensis
ENSCSAVG00000009987	-	98	57.045	ENSACLG00000001308	si:dkey-98f17.5	98	56.818	Astatotilapia_calliptera
ENSCSAVG00000009987	-	100	59.778	ENSACLG00000007907	si:ch211-11k18.4	99	59.778	Astatotilapia_calliptera
ENSCSAVG00000009987	-	100	59.778	ENSAMXG00000017817	si:ch211-11k18.4	99	59.778	Astyanax_mexicanus
ENSCSAVG00000009987	-	100	55.111	ENSAMXG00000001190	si:dkey-98f17.5	100	55.111	Astyanax_mexicanus
ENSCSAVG00000009987	-	83	89.276	ENSCING00000020807	-	98	89.276	Ciona_intestinalis
ENSCSAVG00000009987	-	100	58.444	ENSCSEG00000017661	si:ch211-11k18.4	99	58.889	Cynoglossus_semilaevis
ENSCSAVG00000009987	-	98	55.455	ENSCSEG00000017512	si:dkey-98f17.5	95	56.448	Cynoglossus_semilaevis
ENSCSAVG00000009987	-	100	59.778	ENSCVAG00000015346	si:ch211-11k18.4	99	59.778	Cyprinodon_variegatus
ENSCSAVG00000009987	-	98	55.455	ENSCVAG00000011351	si:dkey-98f17.5	98	55.000	Cyprinodon_variegatus
ENSCSAVG00000009987	-	100	59.333	ENSDARG00000087869	si:ch211-11k18.4	100	68.528	Danio_rerio
ENSCSAVG00000009987	-	96	55.684	ENSDARG00000068863	si:dkey-98f17.5	98	55.452	Danio_rerio
ENSCSAVG00000009987	-	80	53.611	ENSEBUG00000007620	si:dkey-98f17.5	88	56.231	Eptatretus_burgeri
ENSCSAVG00000009987	-	98	56.364	ENSELUG00000003365	si:dkey-98f17.5	98	56.364	Esox_lucius
ENSCSAVG00000009987	-	98	55.227	ENSFHEG00000012744	si:dkey-98f17.5	98	55.000	Fundulus_heteroclitus
ENSCSAVG00000009987	-	100	58.000	ENSFHEG00000019820	si:ch211-11k18.4	99	58.000	Fundulus_heteroclitus
ENSCSAVG00000009987	-	89	53.250	ENSGMOG00000003492	si:ch211-11k18.4	90	56.712	Gadus_morhua
ENSCSAVG00000009987	-	100	58.667	ENSGAFG00000005677	si:ch211-11k18.4	99	58.667	Gambusia_affinis
ENSCSAVG00000009987	-	98	55.000	ENSGAFG00000012362	si:dkey-98f17.5	88	54.773	Gambusia_affinis
ENSCSAVG00000009987	-	55	69.636	ENSGACG00000009399	si:dkey-98f17.5	95	69.636	Gasterosteus_aculeatus
ENSCSAVG00000009987	-	82	63.686	ENSGACG00000013134	si:ch211-11k18.4	91	63.686	Gasterosteus_aculeatus
ENSCSAVG00000009987	-	98	56.818	ENSHBUG00000008331	si:dkey-98f17.5	98	56.591	Haplochromis_burtoni
ENSCSAVG00000009987	-	100	59.778	ENSHBUG00000020638	si:ch211-11k18.4	99	59.778	Haplochromis_burtoni
ENSCSAVG00000009987	-	100	53.084	ENSHCOG00000016505	si:dkey-98f17.5	84	58.886	Hippocampus_comes
ENSCSAVG00000009987	-	100	59.111	ENSHCOG00000014773	si:ch211-11k18.4	99	59.111	Hippocampus_comes
ENSCSAVG00000009987	-	98	53.759	ENSIPUG00000019981	si:dkey-98f17.5	98	53.636	Ictalurus_punctatus
ENSCSAVG00000009987	-	88	55.696	ENSIPUG00000016694	si:ch211-11k18.4	82	57.682	Ictalurus_punctatus
ENSCSAVG00000009987	-	97	58.161	ENSIPUG00000016678	si:ch211-11k18.4	100	58.391	Ictalurus_punctatus
ENSCSAVG00000009987	-	100	58.222	ENSKMAG00000009327	si:ch211-11k18.4	99	58.222	Kryptolebias_marmoratus
ENSCSAVG00000009987	-	98	55.682	ENSKMAG00000014997	si:dkey-98f17.5	98	55.227	Kryptolebias_marmoratus
ENSCSAVG00000009987	-	98	55.682	ENSLBEG00000012756	si:dkey-98f17.5	98	55.455	Labrus_bergylta
ENSCSAVG00000009987	-	99	61.211	ENSLACG00000006280	si:ch211-11k18.4	99	61.211	Latimeria_chalumnae
ENSCSAVG00000009987	-	99	53.795	ENSLACG00000017433	si:dkey-98f17.5	97	52.928	Latimeria_chalumnae
ENSCSAVG00000009987	-	99	57.271	ENSLACG00000004899	-	99	57.271	Latimeria_chalumnae
ENSCSAVG00000009987	-	98	55.530	ENSLOCG00000003824	si:dkey-98f17.5	98	55.756	Lepisosteus_oculatus
ENSCSAVG00000009987	-	98	55.227	ENSMAMG00000014528	si:dkey-98f17.5	98	54.773	Mastacembelus_armatus
ENSCSAVG00000009987	-	97	58.716	ENSMAMG00000002536	si:ch211-11k18.4	100	58.716	Mastacembelus_armatus
ENSCSAVG00000009987	-	98	56.818	ENSMZEG00005016572	si:dkey-98f17.5	98	56.591	Maylandia_zebra
ENSCSAVG00000009987	-	100	59.556	ENSMZEG00005008941	si:ch211-11k18.4	99	59.556	Maylandia_zebra
ENSCSAVG00000009987	-	100	58.000	ENSMMOG00000012485	si:ch211-11k18.4	99	58.000	Mola_mola
ENSCSAVG00000009987	-	100	60.667	ENSMALG00000019735	si:ch211-11k18.4	99	60.667	Monopterus_albus
ENSCSAVG00000009987	-	96	55.814	ENSMALG00000012761	si:dkey-98f17.5	98	55.684	Monopterus_albus
ENSCSAVG00000009987	-	97	59.310	ENSNBRG00000002220	si:ch211-11k18.4	99	59.310	Neolamprologus_brichardi
ENSCSAVG00000009987	-	98	56.916	ENSNBRG00000006068	si:dkey-98f17.5	98	56.916	Neolamprologus_brichardi
ENSCSAVG00000009987	-	100	59.424	ENSONIG00000019412	si:ch211-11k18.4	99	59.424	Oreochromis_niloticus
ENSCSAVG00000009987	-	98	57.273	ENSONIG00000013568	si:dkey-98f17.5	98	57.045	Oreochromis_niloticus
ENSCSAVG00000009987	-	100	59.556	ENSORLG00000012015	si:ch211-11k18.4	99	59.556	Oryzias_latipes
ENSCSAVG00000009987	-	92	57.664	ENSORLG00000007958	si:dkey-98f17.5	95	57.178	Oryzias_latipes
ENSCSAVG00000009987	-	100	60.000	ENSORLG00020012386	si:ch211-11k18.4	99	60.000	Oryzias_latipes_hni
ENSCSAVG00000009987	-	98	56.136	ENSORLG00020013350	si:dkey-98f17.5	98	55.682	Oryzias_latipes_hni
ENSCSAVG00000009987	-	100	59.111	ENSORLG00015022862	si:ch211-11k18.4	99	59.111	Oryzias_latipes_hsok
ENSCSAVG00000009987	-	98	56.136	ENSORLG00015002000	si:dkey-98f17.5	98	55.682	Oryzias_latipes_hsok
ENSCSAVG00000009987	-	100	58.444	ENSOMEG00000018686	si:ch211-11k18.4	99	58.444	Oryzias_melastigma
ENSCSAVG00000009987	-	98	55.682	ENSOMEG00000003154	si:dkey-98f17.5	98	55.455	Oryzias_melastigma
ENSCSAVG00000009987	-	100	60.444	ENSPKIG00000018807	si:ch211-11k18.4	99	60.444	Paramormyrops_kingsleyae
ENSCSAVG00000009987	-	98	55.682	ENSPKIG00000024621	si:dkey-98f17.5	98	55.455	Paramormyrops_kingsleyae
ENSCSAVG00000009987	-	100	57.556	ENSPKIG00000023918	-	98	57.556	Paramormyrops_kingsleyae
ENSCSAVG00000009987	-	100	58.889	ENSPMGG00000016507	si:ch211-11k18.4	99	58.889	Periophthalmus_magnuspinnatus
ENSCSAVG00000009987	-	98	57.500	ENSPMGG00000019065	si:dkey-98f17.5	98	57.273	Periophthalmus_magnuspinnatus
ENSCSAVG00000009987	-	98	54.628	ENSPFOG00000015142	si:dkey-98f17.5	98	54.402	Poecilia_formosa
ENSCSAVG00000009987	-	100	60.089	ENSPFOG00000007976	si:ch211-11k18.4	99	60.089	Poecilia_formosa
ENSCSAVG00000009987	-	100	59.867	ENSPLAG00000019794	si:ch211-11k18.4	99	59.867	Poecilia_latipinna
ENSCSAVG00000009987	-	98	54.773	ENSPLAG00000003709	si:dkey-98f17.5	98	54.545	Poecilia_latipinna
ENSCSAVG00000009987	-	98	55.000	ENSPMEG00000018709	si:dkey-98f17.5	92	54.773	Poecilia_mexicana
ENSCSAVG00000009987	-	100	60.089	ENSPMEG00000024198	si:ch211-11k18.4	100	59.862	Poecilia_mexicana
ENSCSAVG00000009987	-	96	54.884	ENSPREG00000000708	si:dkey-98f17.5	98	54.756	Poecilia_reticulata
ENSCSAVG00000009987	-	94	58.333	ENSPREG00000015319	si:ch211-11k18.4	85	63.733	Poecilia_reticulata
ENSCSAVG00000009987	-	98	56.818	ENSPNYG00000017266	si:dkey-98f17.5	98	56.591	Pundamilia_nyererei
ENSCSAVG00000009987	-	100	59.556	ENSPNYG00000017099	si:ch211-11k18.4	99	59.556	Pundamilia_nyererei
ENSCSAVG00000009987	-	100	60.222	ENSPNAG00000022138	si:ch211-11k18.4	99	60.222	Pygocentrus_nattereri
ENSCSAVG00000009987	-	99	55.804	ENSPNAG00000021352	si:dkey-98f17.5	99	55.580	Pygocentrus_nattereri
ENSCSAVG00000009987	-	100	58.797	ENSSFOG00015000985	si:ch211-11k18.4	94	58.797	Scleropages_formosus
ENSCSAVG00000009987	-	99	52.573	ENSSFOG00015017965	si:dkey-98f17.5	99	51.236	Scleropages_formosus
ENSCSAVG00000009987	-	100	56.889	ENSSMAG00000009651	si:ch211-11k18.4	99	56.889	Scophthalmus_maximus
ENSCSAVG00000009987	-	98	55.455	ENSSMAG00000011905	si:dkey-98f17.5	98	55.455	Scophthalmus_maximus
ENSCSAVG00000009987	-	98	55.227	ENSSDUG00000013457	si:dkey-98f17.5	98	54.773	Seriola_dumerili
ENSCSAVG00000009987	-	100	58.444	ENSSDUG00000016411	si:ch211-11k18.4	99	58.444	Seriola_dumerili
ENSCSAVG00000009987	-	100	58.222	ENSSLDG00000019145	si:ch211-11k18.4	99	58.222	Seriola_lalandi_dorsalis
ENSCSAVG00000009987	-	98	55.000	ENSSLDG00000025395	si:dkey-98f17.5	98	54.545	Seriola_lalandi_dorsalis
ENSCSAVG00000009987	-	88	58.734	ENSSPUG00000010096	-	99	58.794	Sphenodon_punctatus
ENSCSAVG00000009987	-	100	58.889	ENSSPAG00000010697	si:ch211-11k18.4	99	58.889	Stegastes_partitus
ENSCSAVG00000009987	-	98	56.591	ENSSPAG00000018800	si:dkey-98f17.5	98	55.909	Stegastes_partitus
ENSCSAVG00000009987	-	98	54.955	ENSTRUG00000021287	si:dkey-98f17.5	98	54.773	Takifugu_rubripes
ENSCSAVG00000009987	-	100	58.889	ENSTRUG00000020291	si:ch211-11k18.4	99	58.889	Takifugu_rubripes
ENSCSAVG00000009987	-	100	56.637	ENSXETG00000031783	-	99	56.637	Xenopus_tropicalis
ENSCSAVG00000009987	-	100	58.222	ENSXCOG00000018094	si:ch211-11k18.4	99	58.093	Xiphophorus_couchianus
ENSCSAVG00000009987	-	98	55.353	ENSXCOG00000017002	si:dkey-98f17.5	98	55.227	Xiphophorus_couchianus
ENSCSAVG00000009987	-	98	55.455	ENSXMAG00000007688	si:dkey-98f17.5	93	55.000	Xiphophorus_maculatus
ENSCSAVG00000009987	-	100	59.333	ENSXMAG00000021235	si:ch211-11k18.4	99	59.333	Xiphophorus_maculatus