EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000009989 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 12522 bases
Position: chrreftig_27:1290644-1303165
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	1	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	2	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	3	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	4	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	5	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	6	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	7	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	8	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	9	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	10	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	11	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	12	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	13	14
ENSCSAVP00000016977	KH_1	PF00013.29	1.3e-164	14	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	1	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	2	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	3	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	4	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	5	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	6	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	7	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	8	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	9	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	10	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	11	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	12	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	13	14
ENSCSAVP00000016978	KH_1	PF00013.29	2.1e-158	14	14
ENSCSAVP00000016979	KH_1	PF00013.29	7.8e-59	1	5
ENSCSAVP00000016979	KH_1	PF00013.29	7.8e-59	2	5
ENSCSAVP00000016979	KH_1	PF00013.29	7.8e-59	3	5
ENSCSAVP00000016979	KH_1	PF00013.29	7.8e-59	4	5
ENSCSAVP00000016979	KH_1	PF00013.29	7.8e-59	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017162	-	1948	-	ENSCSAVP00000016979	528 (aa)	-	H2ZHB3
ENSCSAVT00000017161	-	3947	-	ENSCSAVP00000016978	1287 (aa)	-	H2ZHB2
ENSCSAVT00000017160	-	3780	-	ENSCSAVP00000016977	1179 (aa)	-	H2ZHB1

Gene Model

Click here to download ENSCSAVG00000009989's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000009989's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000009989	-	98	40.120	WBGene00007463	vgln-1	97	37.276	Caenorhabditis_elegans
ENSCSAVG00000009989	-	100	88.258	ENSCING00000004580	-	95	88.258	Ciona_intestinalis
ENSCSAVG00000009989	-	99	42.951	FBgn0027835	Dp1	92	43.503	Drosophila_melanogaster