EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010109 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 7883 bases
Position: chrreftig_27:1387734-1395616
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017176	RRM_1	PF00076.22	3.8e-19	1	1
ENSCSAVP00000017176	U1snRNP70_N	PF12220.8	1.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017363	-	1662	-	ENSCSAVP00000017176	382 (aa)	-	H2ZHW0

Gene Model

Click here to download ENSCSAVG00000010109's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010109's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010109	-	50	70.681	ENSG00000104852	SNRNP70	97	71.429	Homo_sapiens
ENSCSAVG00000010109	-	50	70.681	ENSANAG00000036787	SNRNP70	96	66.875	Aotus_nancymaae
ENSCSAVG00000010109	-	53	57.711	WBGene00004390	rnp-7	60	57.711	Caenorhabditis_elegans
ENSCSAVG00000010109	-	50	70.681	ENSCJAG00000000193	SNRNP70	96	66.875	Callithrix_jacchus
ENSCSAVG00000010109	-	50	70.681	ENSCAFG00000003711	SNRNP70	96	66.875	Canis_familiaris
ENSCSAVG00000010109	-	50	67.358	ENSCAFG00020025470	SNRNP70	96	62.963	Canis_lupus_dingo
ENSCSAVG00000010109	-	50	70.681	ENSCANG00000036607	SNRNP70	86	68.692	Colobus_angolensis_palliatus
ENSCSAVG00000010109	-	57	64.159	ENSCSEG00000011978	snrnp70	98	65.022	Cynoglossus_semilaevis
ENSCSAVG00000010109	-	50	69.110	ENSDARG00000077126	snrnp70	99	65.432	Danio_rerio
ENSCSAVG00000010109	-	50	70.681	ENSFDAG00000013830	SNRNP70	87	77.027	Fukomys_damarensis
ENSCSAVG00000010109	-	50	67.368	ENSGMOG00000011492	snrnp70	90	67.476	Gadus_morhua
ENSCSAVG00000010109	-	50	67.368	ENSGACG00000000448	snrnp70	64	67.476	Gasterosteus_aculeatus
ENSCSAVG00000010109	-	50	70.681	ENSGGOG00000008245	SNRNP70	96	66.875	Gorilla_gorilla
ENSCSAVG00000010109	-	50	70.681	ENSLAFG00000028536	SNRNP70	92	68.692	Loxodonta_africana
ENSCSAVG00000010109	-	50	70.681	ENSMMUG00000004928	SNRNP70	96	66.875	Macaca_mulatta
ENSCSAVG00000010109	-	50	70.681	ENSMICG00000038437	SNRNP70	96	66.875	Microcebus_murinus
ENSCSAVG00000010109	-	50	70.681	MGP_CAROLIEiJ_G0029714	Snrnp70	100	64.545	Mus_caroli
ENSCSAVG00000010109	-	50	70.681	ENSMUSG00000063511	Snrnp70	88	77.027	Mus_musculus
ENSCSAVG00000010109	-	50	70.681	MGP_PahariEiJ_G0012939	Snrnp70	100	64.545	Mus_pahari
ENSCSAVG00000010109	-	50	70.681	MGP_SPRETEiJ_G0030812	Snrnp70	100	64.545	Mus_spretus
ENSCSAVG00000010109	-	50	70.681	ENSNGAG00000021191	Snrnp70	87	77.027	Nannospalax_galili
ENSCSAVG00000010109	-	59	63.248	ENSNBRG00000003126	snrnp70	95	65.919	Neolamprologus_brichardi
ENSCSAVG00000010109	-	50	69.110	ENSONIG00000007822	snrnp70	52	65.919	Oreochromis_niloticus
ENSCSAVG00000010109	-	50	70.157	ENSOANG00000005213	SNRNP70	93	68.224	Ornithorhynchus_anatinus
ENSCSAVG00000010109	-	50	70.681	ENSOARG00000012608	SNRNP70	58	68.692	Ovis_aries
ENSCSAVG00000010109	-	50	70.681	ENSPPAG00000035067	SNRNP70	96	66.875	Pan_paniscus
ENSCSAVG00000010109	-	50	70.681	ENSPTRG00000011277	SNRNP70	96	66.875	Pan_troglodytes
ENSCSAVG00000010109	-	51	71.134	ENSPMAG00000008502	snrnp70	100	71.134	Petromyzon_marinus
ENSCSAVG00000010109	-	50	62.827	ENSPCOG00000023103	SNRNP70	75	61.682	Propithecus_coquereli
ENSCSAVG00000010109	-	50	70.681	ENSRBIG00000042387	SNRNP70	79	68.692	Rhinopithecus_bieti
ENSCSAVG00000010109	-	50	70.681	ENSRROG00000033636	SNRNP70	79	68.692	Rhinopithecus_roxellana
ENSCSAVG00000010109	-	50	70.681	ENSSBOG00000020026	SNRNP70	96	66.875	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010109	-	50	70.681	ENSUMAG00000001467	SNRNP70	96	66.875	Ursus_maritimus
ENSCSAVG00000010109	-	50	70.681	ENSVVUG00000022976	SNRNP70	96	66.875	Vulpes_vulpes
ENSCSAVG00000010109	-	50	70.157	ENSXETG00000022919	snrnp70	52	69.903	Xenopus_tropicalis