EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000010156 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 918 bases
Position: chrreftig_25:2644383-2645300
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	1	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	2	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	3	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	4	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	5	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	6	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	7	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	8	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	9	10
ENSCSAVP00000017259	zf-C2H2	PF00096.26	3.9e-51	10	10
ENSCSAVP00000017259	zf-met	PF12874.7	1e-16	1	3
ENSCSAVP00000017259	zf-met	PF12874.7	1e-16	2	3
ENSCSAVP00000017259	zf-met	PF12874.7	1e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017447	-	918	-	ENSCSAVP00000017259	305 (aa)	-	H2ZI43

Gene Model

Click here to download ENSCSAVG00000010156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000010156	-	100	48.739	ENSCSAVG00000000642	-	100	51.208
ENSCSAVG00000010156	-	92	53.165	ENSCSAVG00000003690	-	98	53.165
ENSCSAVG00000010156	-	98	52.966	ENSCSAVG00000001834	-	100	52.966
ENSCSAVG00000010156	-	91	37.273	ENSCSAVG00000005896	-	71	37.273
ENSCSAVG00000010156	-	93	40.136	ENSCSAVG00000009739	-	64	40.136
ENSCSAVG00000010156	-	91	35.455	ENSCSAVG00000006729	-	70	35.455
ENSCSAVG00000010156	-	99	41.980	ENSCSAVG00000009574	-	99	45.420
ENSCSAVG00000010156	-	98	53.957	ENSCSAVG00000009953	-	95	53.957
ENSCSAVG00000010156	-	92	39.450	ENSCSAVG00000006745	-	98	39.450
ENSCSAVG00000010156	-	99	51.915	ENSCSAVG00000000293	-	100	51.915
ENSCSAVG00000010156	-	97	48.014	ENSCSAVG00000000649	-	99	48.014
ENSCSAVG00000010156	-	96	35.125	ENSCSAVG00000009217	-	99	35.125
ENSCSAVG00000010156	-	95	44.444	ENSCSAVG00000004543	-	100	36.207
ENSCSAVG00000010156	-	98	52.985	ENSCSAVG00000001830	-	99	52.985
ENSCSAVG00000010156	-	92	50.000	ENSCSAVG00000004762	-	100	50.000
ENSCSAVG00000010156	-	99	50.000	ENSCSAVG00000010960	-	100	50.000
ENSCSAVG00000010156	-	93	39.130	ENSCSAVG00000001949	-	100	39.130
ENSCSAVG00000010156	-	99	51.754	ENSCSAVG00000009583	-	99	51.754
ENSCSAVG00000010156	-	99	49.819	ENSCSAVG00000004703	-	100	49.819
ENSCSAVG00000010156	-	99	50.903	ENSCSAVG00000001989	-	100	52.015
ENSCSAVG00000010156	-	99	49.091	ENSCSAVG00000006608	-	100	49.020
ENSCSAVG00000010156	-	99	53.226	ENSCSAVG00000007918	-	97	53.226
ENSCSAVG00000010156	-	98	51.429	ENSCSAVG00000000655	-	99	51.429
ENSCSAVG00000010156	-	99	53.125	ENSCSAVG00000006141	-	100	52.015
ENSCSAVG00000010156	-	92	48.649	ENSCSAVG00000003895	-	100	48.649
ENSCSAVG00000010156	-	100	49.794	ENSCSAVG00000000673	-	100	49.794
ENSCSAVG00000010156	-	99	50.655	ENSCSAVG00000001808	-	100	50.655
ENSCSAVG00000010156	-	99	47.674	ENSCSAVG00000000690	-	100	47.080
ENSCSAVG00000010156	-	92	42.593	ENSCSAVG00000005904	-	100	42.593
ENSCSAVG00000010156	-	97	49.650	ENSCSAVG00000000520	-	100	49.650
ENSCSAVG00000010156	-	92	40.385	ENSCSAVG00000011749	-	74	40.385
ENSCSAVG00000010156	-	99	48.684	ENSCSAVG00000004678	-	99	48.684
ENSCSAVG00000010156	-	96	45.745	ENSCSAVG00000007589	-	100	45.818
ENSCSAVG00000010156	-	99	41.441	ENSCSAVG00000009819	-	81	41.441
ENSCSAVG00000010156	-	99	55.702	ENSCSAVG00000004499	-	99	55.702
ENSCSAVG00000010156	-	99	55.172	ENSCSAVG00000008862	-	100	55.172
ENSCSAVG00000010156	-	98	46.789	ENSCSAVG00000002179	-	100	46.403
ENSCSAVG00000010156	-	92	45.217	ENSCSAVG00000011146	-	87	45.217
ENSCSAVG00000010156	-	97	37.993	ENSCSAVG00000006650	-	99	38.532

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010156	-	94	48.951	ENSCING00000003470	-	96	48.951	Ciona_intestinalis
ENSCSAVG00000010156	-	94	49.206	ENSCING00000018801	zf(c2h2)-138	86	49.206	Ciona_intestinalis
ENSCSAVG00000010156	-	92	50.357	ENSCGRG00001007163	-	82	50.357	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010156	-	98	48.921	ENSCGRG00001013602	-	95	48.921	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010156	-	92	44.891	ENSCGRG00001002297	-	87	44.891	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010156	-	93	46.245	ENSCGRG00000018332	Zfp53	77	46.245	Cricetulus_griseus_crigri
ENSCSAVG00000010156	-	92	51.376	ENSCGRG00000000778	-	80	50.357	Cricetulus_griseus_crigri
ENSCSAVG00000010156	-	96	46.429	ENSEBUG00000016878	-	83	48.921	Eptatretus_burgeri
ENSCSAVG00000010156	-	92	46.471	ENSEBUG00000001525	-	82	44.803	Eptatretus_burgeri
ENSCSAVG00000010156	-	94	41.637	ENSEBUG00000008792	-	88	41.637	Eptatretus_burgeri
ENSCSAVG00000010156	-	99	48.364	ENSEBUG00000012823	-	79	48.364	Eptatretus_burgeri
ENSCSAVG00000010156	-	98	50.719	ENSEBUG00000005655	-	85	45.276	Eptatretus_burgeri
ENSCSAVG00000010156	-	92	44.615	ENSEBUG00000012454	-	94	44.615	Eptatretus_burgeri
ENSCSAVG00000010156	-	92	47.826	ENSMAUG00000004844	-	87	47.826	Mesocricetus_auratus
ENSCSAVG00000010156	-	93	49.012	ENSMAUG00000005974	-	86	49.012	Mesocricetus_auratus
ENSCSAVG00000010156	-	93	49.804	ENSMAUG00000000939	-	75	49.804	Mesocricetus_auratus
ENSCSAVG00000010156	-	96	47.036	ENSMOCG00000006946	Zfp53	88	47.036	Microtus_ochrogaster
ENSCSAVG00000010156	-	94	50.273	ENSMOCG00000007851	-	72	50.273	Microtus_ochrogaster
ENSCSAVG00000010156	-	93	46.690	MGP_CAROLIEiJ_G0021132	Zfp948	90	46.690	Mus_caroli
ENSCSAVG00000010156	-	96	48.746	ENSMUSG00000062743	Zfp677	84	48.746	Mus_musculus
ENSCSAVG00000010156	-	92	41.935	ENSPSIG00000009270	-	67	41.935	Pelodiscus_sinensis
ENSCSAVG00000010156	-	97	50.714	ENSPEMG00000007241	-	88	50.714	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010156	-	96	49.281	ENSPEMG00000023883	-	86	49.281	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010156	-	96	48.746	ENSRNOG00000052406	LOC102552527	85	48.746	Rattus_norvegicus