EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000010206 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Minus strand
Length
5388 bases
Position
chrreftig_19:3127320-3132707
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000017339GTP_EFTUPF00009.276.2e-2612
ENSCSAVP00000017339GTP_EFTUPF00009.276.2e-2622
ENSCSAVP00000017338GTP_EFTUPF00009.277.9e-2512
ENSCSAVP00000017338GTP_EFTUPF00009.277.9e-2522
ENSCSAVP00000017339GTP_EFTU_D3PF03143.173.7e-3111
ENSCSAVP00000017338GTP_EFTU_D3PF03143.174.2e-3111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000017527-2267-ENSCSAVP00000017338481 (aa)-H2ZIC2
ENSCSAVT00000017528-1810-ENSCSAVP00000017339454 (aa)-H2ZIC3
Gene Model
Click here to download ENSCSAVG00000010206's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010206's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCSAVG00000010206-8233.790ENSCSAVG00000006357-9533.941
ENSCSAVG00000010206-8833.115ENSCSAVG00000002297-6934.028
ENSCSAVG00000010206-8333.864ENSCSAVG00000009663-9534.163
ENSCSAVG00000010206-8231.279ENSCSAVG00000003196-9431.364
ENSCSAVG00000010206-8332.009ENSCSAVG00000001085-8832.009
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000010206-9958.803ENSG00000103342GSPT19166.887Homo_sapiens
ENSCSAVG00000010206-8368.224ENSAPOG00000004594-9458.845Acanthochromis_polyacanthus
ENSCSAVG00000010206-9959.165ENSAPOG00000002524gspt1l9460.073Acanthochromis_polyacanthus
ENSCSAVG00000010206-8667.269ENSAMEG00000009589GSPT19861.850Ailuropoda_melanoleuca
ENSCSAVG00000010206-8367.053ENSACIG00000007028-9962.753Amphilophus_citrinellus
ENSCSAVG00000010206-8363.785ENSACIG00000006643GSPT19161.589Amphilophus_citrinellus
ENSCSAVG00000010206-9960.254ENSAOCG00000016342gspt1l9762.213Amphiprion_ocellaris
ENSCSAVG00000010206-9958.082ENSAOCG00000020972-9458.303Amphiprion_ocellaris
ENSCSAVG00000010206-8368.949ENSAPEG00000003359-8866.590Amphiprion_percula
ENSCSAVG00000010206-9959.528ENSAPEG00000010261gspt1l9460.254Amphiprion_percula
ENSCSAVG00000010206-9958.664ENSATEG00000009194GSPT19459.025Anabas_testudineus
ENSCSAVG00000010206-9960.401ENSATEG00000007769gspt1l9460.545Anabas_testudineus
ENSCSAVG00000010206-8567.273ENSACAG00000003979GSPT18667.188Anolis_carolinensis
ENSCSAVG00000010206-9952.399ENSANAG00000036504GSPT18952.591Aotus_nancymaae
ENSCSAVG00000010206-9960.332ENSACLG00000017598-8966.742Astatotilapia_calliptera
ENSCSAVG00000010206-9961.172ENSACLG00000011643gspt1l9560.545Astatotilapia_calliptera
ENSCSAVG00000010206-9958.608ENSAMXG00000008638gspt19758.212Astyanax_mexicanus
ENSCSAVG00000010206-9960.221ENSAMXG00000002781gspt1l8258.364Astyanax_mexicanus
ENSCSAVG00000010206-9957.570ENSBTAG00000003577GSPT18958.803Bos_taurus
ENSCSAVG00000010206-9960.036ENSCJAG00000018191GSPT18960.545Callithrix_jacchus
ENSCSAVG00000010206-8667.727ENSCAFG00000018856GSPT19862.597Canis_familiaris
ENSCSAVG00000010206-9860.595ENSCAFG00020024250GSPT19362.400Canis_lupus_dingo
ENSCSAVG00000010206-9960.695ENSCHIG00000009274GSPT19158.951Capra_hircus
ENSCSAVG00000010206-9162.698ENSTSYG00000013812-9662.897Carlito_syrichta
ENSCSAVG00000010206-9651.243ENSTSYG00000036050-8671.186Carlito_syrichta
ENSCSAVG00000010206-8457.407ENSCAPG00000014454GSPT19157.407Cavia_aperea
ENSCSAVG00000010206-9263.189ENSCPOG00000009381GSPT19063.189Cavia_porcellus
ENSCSAVG00000010206-7565.649ENSCCAG00000036663-8064.548Cebus_capucinus
ENSCSAVG00000010206-9957.380ENSCATG00000025774GSPT18857.565Cercocebus_atys
ENSCSAVG00000010206-9959.712ENSCLAG00000011772GSPT19267.329Chinchilla_lanigera
ENSCSAVG00000010206-9958.803ENSCSAG00000008244GSPT18858.979Chlorocebus_sabaeus
ENSCSAVG00000010206-9950.288ENSCHOG00000003850GSPT17850.480Choloepus_hoffmanni
ENSCSAVG00000010206-9961.070ENSCPBG00000020430GSPT19761.510Chrysemys_picta_bellii
ENSCSAVG00000010206-8654.348ENSCANG00000035684GSPT18953.630Colobus_angolensis_palliatus
ENSCSAVG00000010206-9958.348ENSCGRG00001009583Gspt19266.228Cricetulus_griseus_chok1gshd
ENSCSAVG00000010206-9959.712ENSCGRG00000002048Gspt19166.887Cricetulus_griseus_crigri
ENSCSAVG00000010206-9961.453ENSCSEG00000019708GSPT19660.109Cynoglossus_semilaevis
ENSCSAVG00000010206-9950.909ENSCVAG00000016392-9848.491Cyprinodon_variegatus
ENSCSAVG00000010206-8268.396ENSCVAG00000000869GSPT19459.173Cyprinodon_variegatus
ENSCSAVG00000010206-8268.632ENSDARG00000031048gspt19658.272Danio_rerio
ENSCSAVG00000010206-9959.672ENSDARG00000098627gspt1l9757.679Danio_rerio
ENSCSAVG00000010206-8667.500ENSDNOG00000004608GSPT19167.108Dasypus_novemcinctus
ENSCSAVG00000010206-8667.045ENSDORG00000025038Gspt19166.446Dipodomys_ordii
ENSCSAVG00000010206-9958.494ENSETEG00000018249GSPT18958.699Echinops_telfairi
ENSCSAVG00000010206-9958.566ENSEASG00005011497GSPT18958.916Equus_asinus_asinus
ENSCSAVG00000010206-8567.654ENSECAG00000021195GSPT19367.108Equus_caballus
ENSCSAVG00000010206-8968.372ENSEEUG00000008851GSPT18268.372Erinaceus_europaeus
ENSCSAVG00000010206-9959.710ENSELUG00000023492gspt1l9459.710Esox_lucius
ENSCSAVG00000010206-9958.333ENSELUG00000019323-9658.721Esox_lucius
ENSCSAVG00000010206-9958.421ENSFCAG00000022281GSPT18959.123Felis_catus
ENSCSAVG00000010206-8667.273ENSFALG00000003880GSPT17565.875Ficedula_albicollis
ENSCSAVG00000010206-9163.095ENSFDAG00000008253GSPT19663.095Fukomys_damarensis
ENSCSAVG00000010206-9961.726ENSFHEG00000009090gspt1l9461.914Fundulus_heteroclitus
ENSCSAVG00000010206-9956.351ENSGMOG00000013056GSPT19456.708Gadus_morhua
ENSCSAVG00000010206-8648.723ENSGMOG00000009933-8250.107Gadus_morhua
ENSCSAVG00000010206-9959.929ENSGALG00000039500GSPT29160.106Gallus_gallus
ENSCSAVG00000010206-9962.127ENSGAFG00000005676gspt1l9562.127Gambusia_affinis
ENSCSAVG00000010206-8661.818ENSGAFG00000020793-9160.793Gambusia_affinis
ENSCSAVG00000010206-9958.140ENSGACG00000004490-8966.067Gasterosteus_aculeatus
ENSCSAVG00000010206-9958.621ENSGACG00000004324gspt1l9758.333Gasterosteus_aculeatus
ENSCSAVG00000010206-9958.834ENSGAGG00000016315GSPT19058.865Gopherus_agassizii
ENSCSAVG00000010206-9958.803ENSGGOG00000004071GSPT19458.979Gorilla_gorilla
ENSCSAVG00000010206-9960.148ENSHBUG00000001538GSPT18966.742Haplochromis_burtoni
ENSCSAVG00000010206-8367.290ENSHBUG00000006257gspt1l9967.290Haplochromis_burtoni
ENSCSAVG00000010206-9952.941ENSHGLG00000012034-9153.309Heterocephalus_glaber_female
ENSCSAVG00000010206-9959.353ENSHGLG00000010520-9167.329Heterocephalus_glaber_female
ENSCSAVG00000010206-9952.174ENSHGLG00100010030-9652.372Heterocephalus_glaber_male
ENSCSAVG00000010206-8667.727ENSHGLG00100015621-9663.095Heterocephalus_glaber_male
ENSCSAVG00000010206-9957.143ENSHCOG00000015286GSPT19457.942Hippocampus_comes
ENSCSAVG00000010206-9958.984ENSHCOG00000016899gspt1l9459.165Hippocampus_comes
ENSCSAVG00000010206-9958.684ENSIPUG00000001655Gspt19559.415Ictalurus_punctatus
ENSCSAVG00000010206-9960.487ENSIPUG00000011358Gspt19460.674Ictalurus_punctatus
ENSCSAVG00000010206-9462.136ENSSTOG00000015406GSPT19962.330Ictidomys_tridecemlineatus
ENSCSAVG00000010206-9959.325ENSJJAG00000015530Gspt18959.325Jaculus_jaculus
ENSCSAVG00000010206-9957.297ENSKMAG00000021919GSPT19459.173Kryptolebias_marmoratus
ENSCSAVG00000010206-9961.825ENSKMAG00000006311-9461.825Kryptolebias_marmoratus
ENSCSAVG00000010206-9960.000ENSLBEG00000006458gspt1l9559.083Labrus_bergylta
ENSCSAVG00000010206-9958.226ENSLBEG00000001128GSPT19459.555Labrus_bergylta
ENSCSAVG00000010206-8552.055ENSLACG00000001700GSPT19150.424Latimeria_chalumnae
ENSCSAVG00000010206-9959.415ENSLOCG00000007431gspt19460.329Lepisosteus_oculatus
ENSCSAVG00000010206-9958.217ENSLAFG00000032278GSPT19658.566Loxodonta_africana
ENSCSAVG00000010206-9959.745ENSMFAG00000037675GSPT18960.545Macaca_fascicularis
ENSCSAVG00000010206-9958.761ENSMMUG00000023178GSPT19166.887Macaca_mulatta
ENSCSAVG00000010206-9960.291ENSMNEG00000032993GSPT19166.887Macaca_nemestrina
ENSCSAVG00000010206-9461.583ENSMLEG00000028669GSPT19961.583Mandrillus_leucophaeus
ENSCSAVG00000010206-9959.347ENSMAMG00000002821gspt1l9460.326Mastacembelus_armatus
ENSCSAVG00000010206-8367.757ENSMAMG00000004326GSPT19666.292Mastacembelus_armatus
ENSCSAVG00000010206-9962.243ENSMZEG00005022024gspt1l9462.338Maylandia_zebra
ENSCSAVG00000010206-9959.963ENSMZEG00005007132-8966.517Maylandia_zebra
ENSCSAVG00000010206-9561.996ENSMGAG00000000878GSPT19962.235Meleagris_gallopavo
ENSCSAVG00000010206-6754.745ENSMAUG00000000551Gspt18755.961Mesocricetus_auratus
ENSCSAVG00000010206-9959.464ENSMICG00000014137GSPT18859.821Microcebus_murinus
ENSCSAVG00000010206-9958.590ENSMOCG00000019604Gspt19160.000Microtus_ochrogaster
ENSCSAVG00000010206-8566.667ENSMMOG00000003725GSPT19364.946Mola_mola
ENSCSAVG00000010206-9763.489ENSMMOG00000009646gspt1l9463.655Mola_mola
ENSCSAVG00000010206-9957.941ENSMODG00000004728-9758.813Monodelphis_domestica
ENSCSAVG00000010206-9354.492ENSMODG00000023082-9855.273Monodelphis_domestica
ENSCSAVG00000010206-9960.037ENSMALG00000003550-9559.404Monopterus_albus
ENSCSAVG00000010206-9958.273ENSMALG00000009500GSPT19066.742Monopterus_albus
ENSCSAVG00000010206-9958.201MGP_CAROLIEiJ_G0020458Gspt19652.800Mus_caroli
ENSCSAVG00000010206-9958.201ENSMUSG00000062203Gspt18959.123Mus_musculus
ENSCSAVG00000010206-9958.377MGP_PahariEiJ_G0016165Gspt19652.800Mus_pahari
ENSCSAVG00000010206-9958.201MGP_SPRETEiJ_G0021353Gspt19652.800Mus_spretus
ENSCSAVG00000010206-8666.292ENSMPUG00000014504GSPT19861.228Mustela_putorius_furo
ENSCSAVG00000010206-9461.776ENSMLUG00000000792GSPT19961.969Myotis_lucifugus
ENSCSAVG00000010206-9958.772ENSNGAG00000023220Gspt18958.947Nannospalax_galili
ENSCSAVG00000010206-9958.750ENSNBRG00000002803GSPT18966.742Neolamprologus_brichardi
ENSCSAVG00000010206-9959.677ENSNLEG00000010199GSPT19166.887Nomascus_leucogenys
ENSCSAVG00000010206-9649.644ENSMEUG00000015169-8049.644Notamacropus_eugenii
ENSCSAVG00000010206-6753.879ENSMEUG00000006697-5653.879Notamacropus_eugenii
ENSCSAVG00000010206-8667.500ENSOPRG00000014219GSPT16566.887Ochotona_princeps
ENSCSAVG00000010206-8667.500ENSODEG00000002248-9167.108Octodon_degus
ENSCSAVG00000010206-7156.604ENSODEG00000011524-8656.349Octodon_degus
ENSCSAVG00000010206-9960.727ENSONIG00000003456gspt1l9461.091Oreochromis_niloticus
ENSCSAVG00000010206-9958.750ENSONIG00000019754-8966.742Oreochromis_niloticus
ENSCSAVG00000010206-7175.692ENSOANG00000009409GSPT18475.692Ornithorhynchus_anatinus
ENSCSAVG00000010206-9958.699ENSOCUG00000004759GSPT18958.699Oryctolagus_cuniculus
ENSCSAVG00000010206-9960.721ENSORLG00000026597gspt1l9460.943Oryzias_latipes
ENSCSAVG00000010206-8267.681ENSORLG00000002867-9458.393Oryzias_latipes
ENSCSAVG00000010206-9960.721ENSORLG00020016364gspt1l9460.943Oryzias_latipes_hni
ENSCSAVG00000010206-8267.925ENSORLG00020006749-8966.517Oryzias_latipes_hni
ENSCSAVG00000010206-8267.681ENSORLG00015005515-9457.885Oryzias_latipes_hsok
ENSCSAVG00000010206-9960.721ENSORLG00015008971gspt1l9561.220Oryzias_latipes_hsok
ENSCSAVG00000010206-9959.142ENSOMEG00000008108-9460.448Oryzias_melastigma
ENSCSAVG00000010206-9959.590ENSOMEG00000002739gspt1l9758.672Oryzias_melastigma
ENSCSAVG00000010206-9958.261ENSOGAG00000007083GSPT18958.783Otolemur_garnettii
ENSCSAVG00000010206-9958.421ENSOARG00000007088GSPT18959.123Ovis_aries
ENSCSAVG00000010206-5955.263ENSPPAG00000028454-7555.128Pan_paniscus
ENSCSAVG00000010206-9461.804ENSPPRG00000005042GSPT19167.329Panthera_pardus
ENSCSAVG00000010206-9461.804ENSPTIG00000020265GSPT19167.329Panthera_tigris_altaica
ENSCSAVG00000010206-9460.078ENSPTRG00000007779-9860.078Pan_troglodytes
ENSCSAVG00000010206-9959.928ENSPANG00000007630GSPT18859.928Papio_anubis
ENSCSAVG00000010206-9960.623ENSPKIG00000022644gspt19658.696Paramormyrops_kingsleyae
ENSCSAVG00000010206-8667.500ENSPSIG00000008275GSPT18866.812Pelodiscus_sinensis
ENSCSAVG00000010206-9958.902ENSPMGG00000022247GSPT19659.160Periophthalmus_magnuspinnatus
ENSCSAVG00000010206-9962.011ENSPMGG00000003007gspt1l9963.158Periophthalmus_magnuspinnatus
ENSCSAVG00000010206-9959.279ENSPEMG00000012896Gspt18960.360Peromyscus_maniculatus_bairdii
ENSCSAVG00000010206-8667.500ENSPCIG00000026776-9765.739Phascolarctos_cinereus
ENSCSAVG00000010206-9950.967ENSPCIG00000005432-8950.967Phascolarctos_cinereus
ENSCSAVG00000010206-9956.752ENSPCIG00000007435-9157.340Phascolarctos_cinereus
ENSCSAVG00000010206-9960.291ENSPFOG00000016035gspt1l9460.656Poecilia_formosa
ENSCSAVG00000010206-8268.160ENSPFOG00000005224-9556.743Poecilia_formosa
ENSCSAVG00000010206-6767.514ENSPLAG00000001492-9056.701Poecilia_latipinna
ENSCSAVG00000010206-5863.782ENSPLAG00000007443GSPT16861.905Poecilia_latipinna
ENSCSAVG00000010206-9962.477ENSPMEG00000022359gspt1l9462.477Poecilia_mexicana
ENSCSAVG00000010206-8268.160ENSPMEG00000007020-9458.559Poecilia_mexicana
ENSCSAVG00000010206-8666.591ENSPREG00000016668-9365.708Poecilia_reticulata
ENSCSAVG00000010206-9961.553ENSPREG00000008023gspt1l8461.394Poecilia_reticulata
ENSCSAVG00000010206-9958.979ENSPPYG00000007114GSPT18258.979Pongo_abelii
ENSCSAVG00000010206-9951.146ENSPCAG00000011379GSPT17952.734Procavia_capensis
ENSCSAVG00000010206-9958.319ENSPCOG00000013204GSPT19060.265Propithecus_coquereli
ENSCSAVG00000010206-9958.217ENSPVAG00000005009GSPT17958.916Pteropus_vampyrus
ENSCSAVG00000010206-9958.633ENSPNYG00000002903-8966.742Pundamilia_nyererei
ENSCSAVG00000010206-9960.364ENSPNYG00000010474gspt1l9461.091Pundamilia_nyererei
ENSCSAVG00000010206-9958.791ENSPNAG00000011819gspt19757.509Pygocentrus_nattereri
ENSCSAVG00000010206-9959.633ENSPNAG00000002605gspt1l9757.401Pygocentrus_nattereri
ENSCSAVG00000010206-9959.051ENSRNOG00000046271LOC1009116858959.227Rattus_norvegicus
ENSCSAVG00000010206-9461.390ENSRBIG00000039784GSPT19961.390Rhinopithecus_bieti
ENSCSAVG00000010206-9461.390ENSRROG00000031350GSPT19166.887Rhinopithecus_roxellana
ENSCSAVG00000010206-9461.776ENSSBOG00000017761GSPT19961.776Saimiri_boliviensis_boliviensis
ENSCSAVG00000010206-8765.695ENSSHAG00000002700-7565.695Sarcophilus_harrisii
ENSCSAVG00000010206-9361.702ENSSHAG00000005908-9961.702Sarcophilus_harrisii
ENSCSAVG00000010206-9758.889ENSSFOG00015014731-9359.142Scleropages_formosus
ENSCSAVG00000010206-9959.710ENSSFOG00015011277gspt19460.958Scleropages_formosus
ENSCSAVG00000010206-9957.554ENSSMAG00000007886GSPT18965.618Scophthalmus_maximus
ENSCSAVG00000010206-9959.034ENSSMAG00000014782gspt1l9461.255Scophthalmus_maximus
ENSCSAVG00000010206-9962.384ENSSDUG00000016908gspt1l9462.617Seriola_dumerili
ENSCSAVG00000010206-8368.224ENSSDUG00000008404GSPT19066.966Seriola_dumerili
ENSCSAVG00000010206-9962.197ENSSLDG00000009000gspt1l9462.430Seriola_lalandi_dorsalis
ENSCSAVG00000010206-8368.224ENSSLDG00000008363GSPT19066.966Seriola_lalandi_dorsalis
ENSCSAVG00000010206-6153.281ENSSARG00000013461-6154.856Sorex_araneus
ENSCSAVG00000010206-7169.231ENSSPUG00000007536GSPT15469.231Sphenodon_punctatus
ENSCSAVG00000010206-9960.894ENSSPAG00000011542gspt1l9461.825Stegastes_partitus
ENSCSAVG00000010206-8367.991ENSSPAG00000004622-9457.942Stegastes_partitus
ENSCSAVG00000010206-8666.742ENSSPAG00000009785-8965.419Stegastes_partitus
ENSCSAVG00000010206-9958.217ENSSSCG00000021118GSPT18958.916Sus_scrofa
ENSCSAVG00000010206-8667.273ENSTGUG00000005103GSPT18865.875Taeniopygia_guttata
ENSCSAVG00000010206-10059.381ENSTRUG00000012645gspt1l9559.745Takifugu_rubripes
ENSCSAVG00000010206-7765.423ENSTRUG00000016971-9965.423Takifugu_rubripes
ENSCSAVG00000010206-9958.000ENSTNIG00000012926GSPT19458.000Tetraodon_nigroviridis
ENSCSAVG00000010206-9162.815ENSTNIG00000010212gspt1l9563.025Tetraodon_nigroviridis
ENSCSAVG00000010206-9958.596ENSTTRG00000011630GSPT18059.051Tursiops_truncatus
ENSCSAVG00000010206-8665.682ENSUAMG00000004460GSPT19065.342Ursus_americanus
ENSCSAVG00000010206-8667.727ENSUMAG00000004033GSPT19963.294Ursus_maritimus
ENSCSAVG00000010206-9561.568ENSVPAG00000006903GSPT18461.568Vicugna_pacos
ENSCSAVG00000010206-9362.597ENSVVUG00000018198GSPT19562.597Vulpes_vulpes
ENSCSAVG00000010206-9954.662ENSXETG00000005540gspt19754.662Xenopus_tropicalis
ENSCSAVG00000010206-9958.333ENSXCOG00000003084-9657.542Xiphophorus_couchianus
ENSCSAVG00000010206-9161.039ENSXCOG00000016099gspt1l9959.063Xiphophorus_couchianus
ENSCSAVG00000010206-9962.127ENSXMAG00000007284gspt1l9462.127Xiphophorus_maculatus
ENSCSAVG00000010206-9957.609ENSXMAG00000022050-9459.025Xiphophorus_maculatus

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