EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000010245 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2636 bases
Position: chrreftig_30:3171503-3174138
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017400	MMR_HSR1	PF01926.23	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017591	-	1161	-	ENSCSAVP00000017400	279 (aa)	-	H2ZII4

Gene Model

Click here to download ENSCSAVG00000010245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000010245	-	58	45.402	ENSCSAVG00000008684	-	80	45.402
ENSCSAVG00000010245	-	70	36.765	ENSCSAVG00000000160	-	95	36.765
ENSCSAVG00000010245	-	64	41.899	ENSCSAVG00000010348	-	89	41.899
ENSCSAVG00000010245	-	71	32.683	ENSCSAVG00000000613	-	87	36.620
ENSCSAVG00000010245	-	57	35.366	ENSCSAVG00000007813	-	63	35.366
ENSCSAVG00000010245	-	58	36.905	ENSCSAVG00000011162	-	82	36.905
ENSCSAVG00000010245	-	54	38.411	ENSCSAVG00000005120	-	81	34.010
ENSCSAVG00000010245	-	55	38.710	ENSCSAVG00000009128	-	74	38.710
ENSCSAVG00000010245	-	55	41.558	ENSCSAVG00000008995	-	96	41.558
ENSCSAVG00000010245	-	74	39.234	ENSCSAVG00000009147	-	100	39.234
ENSCSAVG00000010245	-	71	32.836	ENSCSAVG00000005689	-	96	32.836
ENSCSAVG00000010245	-	67	35.979	ENSCSAVG00000001356	-	77	35.979
ENSCSAVG00000010245	-	58	38.012	ENSCSAVG00000002804	-	82	38.012
ENSCSAVG00000010245	-	62	31.429	ENSCSAVG00000006042	-	79	31.429
ENSCSAVG00000010245	-	58	42.073	ENSCSAVG00000002088	-	77	42.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010245	-	65	41.436	ENSCING00000009535	-	87	41.436	Ciona_intestinalis
ENSCSAVG00000010245	-	76	83.886	ENSCING00000006139	-	100	83.886	Ciona_intestinalis
ENSCSAVG00000010245	-	60	45.509	YFL005W	SEC4	78	45.509	Saccharomyces_cerevisiae