EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010336 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 16607 bases
Position: chrreftig_1:2767447-2784053
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017544	RNA_ligase	PF09414.10	2.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017735	-	2881	-	ENSCSAVP00000017544	770 (aa)	-	H2ZIX8

Gene Model

Click here to download ENSCSAVG00000010336's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010336's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010336	-	98	45.204	ENSG00000174405	LIG4	83	46.088	Homo_sapiens
ENSCSAVG00000010336	-	98	45.000	ENSAPOG00000000866	lig4	83	45.000	Acanthochromis_polyacanthus
ENSCSAVG00000010336	-	98	44.751	ENSAMEG00000019685	LIG4	83	44.751	Ailuropoda_melanoleuca
ENSCSAVG00000010336	-	98	44.868	ENSACIG00000018309	lig4	83	44.868	Amphilophus_citrinellus
ENSCSAVG00000010336	-	98	44.605	ENSAOCG00000011768	lig4	83	44.605	Amphiprion_ocellaris
ENSCSAVG00000010336	-	98	44.737	ENSAPEG00000017815	lig4	83	44.737	Amphiprion_percula
ENSCSAVG00000010336	-	98	45.263	ENSATEG00000005583	lig4	83	45.263	Anabas_testudineus
ENSCSAVG00000010336	-	96	45.479	ENSAPLG00000001673	LIG4	83	45.479	Anas_platyrhynchos
ENSCSAVG00000010336	-	98	46.184	ENSACAG00000014566	LIG4	83	46.184	Anolis_carolinensis
ENSCSAVG00000010336	-	98	44.941	ENSANAG00000012446	LIG4	83	44.941	Aotus_nancymaae
ENSCSAVG00000010336	-	98	45.000	ENSACLG00000027051	lig4	83	45.000	Astatotilapia_calliptera
ENSCSAVG00000010336	-	99	45.170	ENSAMXG00000008192	lig4	79	45.170	Astyanax_mexicanus
ENSCSAVG00000010336	-	98	46.518	ENSBTAG00000015868	LIG4	88	46.518	Bos_taurus
ENSCSAVG00000010336	-	98	45.335	ENSCJAG00000014689	LIG4	83	45.335	Callithrix_jacchus
ENSCSAVG00000010336	-	98	45.801	ENSCAFG00000006031	LIG4	83	45.801	Canis_familiaris
ENSCSAVG00000010336	-	98	45.801	ENSCAFG00020021230	LIG4	83	45.801	Canis_lupus_dingo
ENSCSAVG00000010336	-	98	46.518	ENSCHIG00000001019	LIG4	83	46.518	Capra_hircus
ENSCSAVG00000010336	-	98	46.789	ENSCAPG00000006284	LIG4	84	46.789	Cavia_aperea
ENSCSAVG00000010336	-	98	46.658	ENSCPOG00000014266	LIG4	83	46.658	Cavia_porcellus
ENSCSAVG00000010336	-	98	45.335	ENSCCAG00000019971	LIG4	83	45.335	Cebus_capucinus
ENSCSAVG00000010336	-	98	45.072	ENSCATG00000021075	LIG4	83	45.072	Cercocebus_atys
ENSCSAVG00000010336	-	99	46.928	ENSCLAG00000003376	LIG4	83	46.928	Chinchilla_lanigera
ENSCSAVG00000010336	-	98	45.072	ENSCSAG00000000211	LIG4	83	45.072	Chlorocebus_sabaeus
ENSCSAVG00000010336	-	98	46.781	ENSCPBG00000023291	LIG4	83	46.781	Chrysemys_picta_bellii
ENSCSAVG00000010336	-	84	80.989	ENSCING00000009536	-	99	80.989	Ciona_intestinalis
ENSCSAVG00000010336	-	98	44.809	ENSCANG00000005805	LIG4	83	44.809	Colobus_angolensis_palliatus
ENSCSAVG00000010336	-	98	45.729	ENSCGRG00001012072	Lig4	83	45.729	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010336	-	98	45.729	ENSCGRG00000013417	Lig4	83	45.729	Cricetulus_griseus_crigri
ENSCSAVG00000010336	-	98	44.737	ENSCSEG00000013905	lig4	82	44.737	Cynoglossus_semilaevis
ENSCSAVG00000010336	-	98	45.072	ENSCVAG00000007896	lig4	83	45.072	Cyprinodon_variegatus
ENSCSAVG00000010336	-	98	44.474	ENSDARG00000060620	lig4	83	44.474	Danio_rerio
ENSCSAVG00000010336	-	98	45.478	ENSDNOG00000000513	LIG4	83	45.550	Dasypus_novemcinctus
ENSCSAVG00000010336	-	98	45.466	ENSDORG00000027303	Lig4	83	45.466	Dipodomys_ordii
ENSCSAVG00000010336	-	98	43.570	ENSETEG00000015563	LIG4	84	43.758	Echinops_telfairi
ENSCSAVG00000010336	-	98	40.428	ENSEBUG00000014243	lig4	83	40.428	Eptatretus_burgeri
ENSCSAVG00000010336	-	98	45.466	ENSEASG00005022073	LIG4	83	45.466	Equus_asinus_asinus
ENSCSAVG00000010336	-	98	45.598	ENSECAG00000003257	LIG4	83	45.598	Equus_caballus
ENSCSAVG00000010336	-	98	45.419	ENSELUG00000006787	lig4	83	45.609	Esox_lucius
ENSCSAVG00000010336	-	98	45.144	ENSFCAG00000031985	LIG4	83	45.144	Felis_catus
ENSCSAVG00000010336	-	98	45.204	ENSFALG00000004214	LIG4	92	45.204	Ficedula_albicollis
ENSCSAVG00000010336	-	98	46.518	ENSFDAG00000008973	LIG4	83	46.518	Fukomys_damarensis
ENSCSAVG00000010336	-	98	44.605	ENSFHEG00000007398	lig4	75	44.605	Fundulus_heteroclitus
ENSCSAVG00000010336	-	98	42.444	ENSGMOG00000012843	lig4	97	42.444	Gadus_morhua
ENSCSAVG00000010336	-	98	45.466	ENSGALG00000016854	LIG4	83	45.466	Gallus_gallus
ENSCSAVG00000010336	-	98	44.914	ENSGAFG00000019779	lig4	80	45.000	Gambusia_affinis
ENSCSAVG00000010336	-	98	44.605	ENSGACG00000014135	lig4	83	44.605	Gasterosteus_aculeatus
ENSCSAVG00000010336	-	98	45.072	ENSGGOG00000027771	LIG4	83	45.072	Gorilla_gorilla
ENSCSAVG00000010336	-	98	45.132	ENSHBUG00000006245	lig4	83	45.132	Haplochromis_burtoni
ENSCSAVG00000010336	-	98	46.386	ENSHGLG00000000718	LIG4	83	46.386	Heterocephalus_glaber_female
ENSCSAVG00000010336	-	98	46.386	ENSHGLG00100003265	LIG4	83	46.386	Heterocephalus_glaber_male
ENSCSAVG00000010336	-	98	44.868	ENSHCOG00000012010	lig4	83	44.868	Hippocampus_comes
ENSCSAVG00000010336	-	98	44.737	ENSIPUG00000013748	lig4	83	44.737	Ictalurus_punctatus
ENSCSAVG00000010336	-	98	45.861	ENSSTOG00000024303	LIG4	83	45.861	Ictidomys_tridecemlineatus
ENSCSAVG00000010336	-	98	45.801	ENSJJAG00000006750	Lig4	83	45.801	Jaculus_jaculus
ENSCSAVG00000010336	-	98	44.342	ENSKMAG00000001149	lig4	83	44.342	Kryptolebias_marmoratus
ENSCSAVG00000010336	-	89	46.299	ENSLBEG00000014578	lig4	83	46.299	Labrus_bergylta
ENSCSAVG00000010336	-	98	45.323	ENSLACG00000003282	LIG4	83	45.323	Latimeria_chalumnae
ENSCSAVG00000010336	-	98	46.053	ENSLOCG00000008901	lig4	82	46.053	Lepisosteus_oculatus
ENSCSAVG00000010336	-	98	44.634	ENSLAFG00000031152	LIG4	83	44.634	Loxodonta_africana
ENSCSAVG00000010336	-	98	45.072	ENSMFAG00000037235	LIG4	83	45.072	Macaca_fascicularis
ENSCSAVG00000010336	-	98	44.941	ENSMMUG00000008874	LIG4	83	44.941	Macaca_mulatta
ENSCSAVG00000010336	-	98	45.072	ENSMNEG00000023575	LIG4	83	45.072	Macaca_nemestrina
ENSCSAVG00000010336	-	98	45.072	ENSMLEG00000026720	LIG4	83	45.072	Mandrillus_leucophaeus
ENSCSAVG00000010336	-	98	44.342	ENSMAMG00000008472	lig4	83	44.342	Mastacembelus_armatus
ENSCSAVG00000010336	-	98	45.000	ENSMZEG00005001855	lig4	83	45.000	Maylandia_zebra
ENSCSAVG00000010336	-	98	45.729	ENSMGAG00000015532	LIG4	83	45.729	Meleagris_gallopavo
ENSCSAVG00000010336	-	98	45.407	ENSMOCG00000019000	Lig4	83	45.407	Microtus_ochrogaster
ENSCSAVG00000010336	-	98	44.459	ENSMMOG00000004390	lig4	83	44.459	Mola_mola
ENSCSAVG00000010336	-	98	44.941	ENSMODG00000025064	LIG4	83	45.072	Monodelphis_domestica
ENSCSAVG00000010336	-	99	44.314	ENSMALG00000008555	lig4	84	44.314	Monopterus_albus
ENSCSAVG00000010336	-	98	45.204	MGP_CAROLIEiJ_G0030809	Lig4	83	45.204	Mus_caroli
ENSCSAVG00000010336	-	98	45.729	ENSMUSG00000049717	Lig4	83	45.729	Mus_musculus
ENSCSAVG00000010336	-	98	45.729	MGP_PahariEiJ_G0021270	Lig4	83	45.729	Mus_pahari
ENSCSAVG00000010336	-	98	45.729	MGP_SPRETEiJ_G0031917	Lig4	83	45.729	Mus_spretus
ENSCSAVG00000010336	-	98	45.144	ENSMPUG00000018675	LIG4	83	45.144	Mustela_putorius_furo
ENSCSAVG00000010336	-	98	46.255	ENSMLUG00000001267	LIG4	83	46.255	Myotis_lucifugus
ENSCSAVG00000010336	-	98	45.932	ENSNGAG00000013258	Lig4	83	45.932	Nannospalax_galili
ENSCSAVG00000010336	-	98	45.000	ENSNBRG00000021252	lig4	83	45.000	Neolamprologus_brichardi
ENSCSAVG00000010336	-	98	45.204	ENSNLEG00000007888	LIG4	83	45.204	Nomascus_leucogenys
ENSCSAVG00000010336	-	98	44.284	ENSOPRG00000005765	LIG4	83	44.284	Ochotona_princeps
ENSCSAVG00000010336	-	98	46.194	ENSODEG00000019683	LIG4	83	46.265	Octodon_degus
ENSCSAVG00000010336	-	98	45.000	ENSONIG00000011969	lig4	82	45.000	Oreochromis_niloticus
ENSCSAVG00000010336	-	99	45.419	ENSOCUG00000015734	LIG4	83	45.419	Oryctolagus_cuniculus
ENSCSAVG00000010336	-	98	45.347	ENSORLG00000004041	lig4	83	45.872	Oryzias_latipes
ENSCSAVG00000010336	-	98	45.085	ENSORLG00020019607	lig4	83	45.609	Oryzias_latipes_hni
ENSCSAVG00000010336	-	98	45.216	ENSORLG00015017754	lig4	83	45.740	Oryzias_latipes_hsok
ENSCSAVG00000010336	-	87	46.460	ENSOMEG00000003459	lig4	98	46.460	Oryzias_melastigma
ENSCSAVG00000010336	-	98	45.204	ENSOGAG00000032120	LIG4	83	45.204	Otolemur_garnettii
ENSCSAVG00000010336	-	98	45.982	ENSOARG00000005590	LIG4	99	45.982	Ovis_aries
ENSCSAVG00000010336	-	98	45.204	ENSPPAG00000032998	LIG4	83	45.204	Pan_paniscus
ENSCSAVG00000010336	-	98	45.407	ENSPPRG00000017804	LIG4	83	45.407	Panthera_pardus
ENSCSAVG00000010336	-	98	45.276	ENSPTIG00000010051	LIG4	83	45.276	Panthera_tigris_altaica
ENSCSAVG00000010336	-	98	45.335	ENSPTRG00000006025	LIG4	83	45.335	Pan_troglodytes
ENSCSAVG00000010336	-	98	45.204	ENSPANG00000007562	LIG4	83	45.204	Papio_anubis
ENSCSAVG00000010336	-	98	45.466	ENSPKIG00000011645	lig4	82	45.466	Paramormyrops_kingsleyae
ENSCSAVG00000010336	-	98	46.255	ENSPSIG00000001504	LIG4	83	46.255	Pelodiscus_sinensis
ENSCSAVG00000010336	-	98	44.650	ENSPMGG00000013486	lig4	83	44.737	Periophthalmus_magnuspinnatus
ENSCSAVG00000010336	-	98	44.941	ENSPEMG00000000076	Lig4	83	44.941	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010336	-	98	44.415	ENSPCIG00000021882	LIG4	83	44.415	Phascolarctos_cinereus
ENSCSAVG00000010336	-	98	44.914	ENSPFOG00000000797	lig4	83	45.000	Poecilia_formosa
ENSCSAVG00000010336	-	98	44.914	ENSPLAG00000001196	lig4	83	45.000	Poecilia_latipinna
ENSCSAVG00000010336	-	98	44.914	ENSPMEG00000021353	lig4	83	45.000	Poecilia_mexicana
ENSCSAVG00000010336	-	98	45.046	ENSPREG00000007323	lig4	83	45.132	Poecilia_reticulata
ENSCSAVG00000010336	-	98	45.466	ENSPPYG00000005540	LIG4	83	45.466	Pongo_abelii
ENSCSAVG00000010336	-	98	45.072	ENSPVAG00000016403	LIG4	83	45.072	Pteropus_vampyrus
ENSCSAVG00000010336	-	98	45.000	ENSPNYG00000009660	lig4	83	45.000	Pundamilia_nyererei
ENSCSAVG00000010336	-	98	45.000	ENSPNAG00000028056	lig4	83	45.000	Pygocentrus_nattereri
ENSCSAVG00000010336	-	98	45.000	ENSPNAG00000028069	LIG4	83	45.000	Pygocentrus_nattereri
ENSCSAVG00000010336	-	98	45.861	ENSRNOG00000014605	Lig4	83	45.861	Rattus_norvegicus
ENSCSAVG00000010336	-	98	44.401	ENSRBIG00000039962	LIG4	83	44.401	Rhinopithecus_bieti
ENSCSAVG00000010336	-	98	45.072	ENSRROG00000006040	LIG4	83	45.072	Rhinopithecus_roxellana
ENSCSAVG00000010336	-	98	45.204	ENSSBOG00000019029	LIG4	83	45.204	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010336	-	98	43.890	ENSSHAG00000009525	LIG4	83	43.890	Sarcophilus_harrisii
ENSCSAVG00000010336	-	98	45.598	ENSSFOG00015012835	lig4	83	45.598	Scleropages_formosus
ENSCSAVG00000010336	-	98	44.605	ENSSMAG00000011267	lig4	85	44.605	Scophthalmus_maximus
ENSCSAVG00000010336	-	98	44.474	ENSSDUG00000010343	lig4	83	44.474	Seriola_dumerili
ENSCSAVG00000010336	-	98	43.684	ENSSLDG00000003239	lig4	82	43.684	Seriola_lalandi_dorsalis
ENSCSAVG00000010336	-	98	45.812	ENSSARG00000006573	LIG4	83	45.812	Sorex_araneus
ENSCSAVG00000010336	-	91	46.011	ENSSPUG00000002444	LIG4	83	46.154	Sphenodon_punctatus
ENSCSAVG00000010336	-	98	44.737	ENSSPAG00000001609	lig4	83	44.737	Stegastes_partitus
ENSCSAVG00000010336	-	98	45.921	ENSSSCG00000009540	LIG4	83	45.921	Sus_scrofa
ENSCSAVG00000010336	-	98	45.204	ENSTGUG00000010795	LIG4	83	45.204	Taeniopygia_guttata
ENSCSAVG00000010336	-	98	45.059	ENSTRUG00000009984	lig4	83	45.059	Takifugu_rubripes
ENSCSAVG00000010336	-	98	45.455	ENSTNIG00000010348	lig4	84	45.850	Tetraodon_nigroviridis
ENSCSAVG00000010336	-	98	45.598	ENSTBEG00000017741	LIG4	83	45.598	Tupaia_belangeri
ENSCSAVG00000010336	-	98	45.801	ENSTTRG00000012660	LIG4	83	45.801	Tursiops_truncatus
ENSCSAVG00000010336	-	98	44.751	ENSUAMG00000003773	LIG4	83	44.751	Ursus_americanus
ENSCSAVG00000010336	-	98	45.850	ENSXETG00000002654	lig4	83	45.850	Xenopus_tropicalis
ENSCSAVG00000010336	-	98	44.914	ENSXCOG00000017401	lig4	83	45.000	Xiphophorus_couchianus
ENSCSAVG00000010336	-	98	44.782	ENSXMAG00000015142	lig4	83	44.868	Xiphophorus_maculatus