EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000010348 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 4064 bases
Position: chrreftig_58:3299476-3303539
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017564	MMR_HSR1	PF01926.23	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017755	-	1080	-	ENSCSAVP00000017564	200 (aa)	-	H2ZIZ8

Gene Model

Click here to download ENSCSAVG00000010348's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010348's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000010348	-	86	40.116	ENSCSAVG00000001356	-	71	40.116
ENSCSAVG00000010348	-	95	46.193	ENSCSAVG00000009147	-	95	46.193
ENSCSAVG00000010348	-	97	37.745	ENSCSAVG00000011162	-	97	37.745
ENSCSAVG00000010348	-	82	44.379	ENSCSAVG00000008684	-	80	44.379
ENSCSAVG00000010348	-	99	39.713	ENSCSAVG00000009128	-	98	39.713
ENSCSAVG00000010348	-	80	37.500	ENSCSAVG00000006042	-	79	37.500
ENSCSAVG00000010348	-	99	48.325	ENSCSAVG00000000160	-	97	48.325
ENSCSAVG00000010348	-	79	30.818	ENSCSAVG00000005450	-	71	30.818
ENSCSAVG00000010348	-	76	51.316	ENSCSAVG00000008995	-	94	51.316
ENSCSAVG00000010348	-	86	37.791	ENSCSAVG00000005120	-	74	39.130
ENSCSAVG00000010348	-	96	50.761	ENSCSAVG00000002088	-	91	50.761
ENSCSAVG00000010348	-	76	39.103	ENSCSAVG00000005689	-	75	39.103
ENSCSAVG00000010348	-	89	41.899	ENSCSAVG00000010245	-	64	41.899
ENSCSAVG00000010348	-	81	36.747	ENSCSAVG00000007813	-	63	36.747
ENSCSAVG00000010348	-	81	37.278	ENSCSAVG00000002804	-	80	37.278
ENSCSAVG00000010348	-	91	41.053	ENSCSAVG00000000613	-	88	44.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010348	-	99	74.372	ENSAPOG00000010760	rab18a	97	74.372	Acanthochromis_polyacanthus
ENSCSAVG00000010348	-	99	64.824	ENSACIG00000009617	rab18a	97	64.824	Amphilophus_citrinellus
ENSCSAVG00000010348	-	99	74.372	ENSAOCG00000016233	rab18a	97	74.372	Amphiprion_ocellaris
ENSCSAVG00000010348	-	99	74.372	ENSAPEG00000005392	rab18a	97	74.372	Amphiprion_percula
ENSCSAVG00000010348	-	99	74.874	ENSATEG00000021911	rab18a	97	74.874	Anabas_testudineus
ENSCSAVG00000010348	-	99	75.500	ENSACAG00000005463	-	97	75.500	Anolis_carolinensis
ENSCSAVG00000010348	-	99	73.367	ENSACLG00000011484	rab18a	97	73.367	Astatotilapia_calliptera
ENSCSAVG00000010348	-	100	74.500	ENSCPBG00000015839	-	97	74.500	Chrysemys_picta_bellii
ENSCSAVG00000010348	-	93	71.351	ENSCPBG00000027619	-	91	71.351	Chrysemys_picta_bellii
ENSCSAVG00000010348	-	100	93.500	ENSCING00000006838	-	100	93.500	Ciona_intestinalis
ENSCSAVG00000010348	-	99	74.372	ENSCSEG00000011816	rab18a	97	74.372	Cynoglossus_semilaevis
ENSCSAVG00000010348	-	97	75.130	ENSCVAG00000015451	rab18a	97	74.372	Cyprinodon_variegatus
ENSCSAVG00000010348	-	99	71.500	ENSDARG00000055291	rab18a	97	71.500	Danio_rerio
ENSCSAVG00000010348	-	99	74.000	ENSELUG00000003805	rab18a	97	74.000	Esox_lucius
ENSCSAVG00000010348	-	97	74.611	ENSFHEG00000019455	rab18a	97	73.869	Fundulus_heteroclitus
ENSCSAVG00000010348	-	94	75.532	ENSGAFG00000002790	rab18a	97	73.367	Gambusia_affinis
ENSCSAVG00000010348	-	100	74.000	ENSGAGG00000015642	-	97	74.000	Gopherus_agassizii
ENSCSAVG00000010348	-	99	73.367	ENSHBUG00000001518	rab18a	97	73.367	Haplochromis_burtoni
ENSCSAVG00000010348	-	99	73.869	ENSLBEG00000005861	rab18a	93	73.869	Labrus_bergylta
ENSCSAVG00000010348	-	96	76.562	ENSLACG00000009310	rab18a	97	75.000	Latimeria_chalumnae
ENSCSAVG00000010348	-	95	75.132	ENSLOCG00000007491	rab18a	97	73.000	Lepisosteus_oculatus
ENSCSAVG00000010348	-	99	73.737	ENSMAMG00000014320	rab18a	97	73.737	Mastacembelus_armatus
ENSCSAVG00000010348	-	99	73.232	ENSMZEG00005017235	rab18a	97	73.232	Maylandia_zebra
ENSCSAVG00000010348	-	99	74.372	ENSMALG00000009813	rab18a	97	74.372	Monopterus_albus
ENSCSAVG00000010348	-	99	73.367	ENSNBRG00000013507	rab18a	97	73.367	Neolamprologus_brichardi
ENSCSAVG00000010348	-	97	72.539	ENSORLG00000004624	rab18a	97	71.859	Oryzias_latipes
ENSCSAVG00000010348	-	97	73.057	ENSORLG00020008333	rab18a	97	72.362	Oryzias_latipes_hni
ENSCSAVG00000010348	-	97	72.021	ENSORLG00015004739	rab18a	97	71.357	Oryzias_latipes_hsok
ENSCSAVG00000010348	-	94	74.468	ENSOMEG00000020605	rab18a	97	72.362	Oryzias_melastigma
ENSCSAVG00000010348	-	99	74.500	ENSPKIG00000009825	rab18a	97	74.500	Paramormyrops_kingsleyae
ENSCSAVG00000010348	-	90	78.771	ENSPMGG00000020409	-	97	74.372	Periophthalmus_magnuspinnatus
ENSCSAVG00000010348	-	94	76.064	ENSPFOG00000007571	rab18a	97	73.869	Poecilia_formosa
ENSCSAVG00000010348	-	94	76.064	ENSPLAG00000010104	rab18a	97	73.869	Poecilia_latipinna
ENSCSAVG00000010348	-	94	76.064	ENSPMEG00000013085	rab18a	97	73.869	Poecilia_mexicana
ENSCSAVG00000010348	-	94	76.064	ENSPREG00000005923	rab18a	80	73.869	Poecilia_reticulata
ENSCSAVG00000010348	-	99	73.367	ENSPNYG00000007064	rab18a	97	73.367	Pundamilia_nyererei
ENSCSAVG00000010348	-	100	73.529	ENSPNAG00000011548	rab18a	100	73.529	Pygocentrus_nattereri
ENSCSAVG00000010348	-	95	76.190	ENSSFOG00015017444	rab18a	82	74.000	Scleropages_formosus
ENSCSAVG00000010348	-	97	73.057	ENSSMAG00000002969	rab18a	97	72.362	Scophthalmus_maximus
ENSCSAVG00000010348	-	97	74.611	ENSSDUG00000003823	rab18a	97	73.869	Seriola_dumerili
ENSCSAVG00000010348	-	97	74.611	ENSSLDG00000006977	rab18a	97	73.869	Seriola_lalandi_dorsalis
ENSCSAVG00000010348	-	95	76.720	ENSSPUG00000017677	-	97	74.000	Sphenodon_punctatus
ENSCSAVG00000010348	-	99	75.879	ENSTRUG00000004984	rab18a	97	75.879	Takifugu_rubripes
ENSCSAVG00000010348	-	94	75.532	ENSUMAG00000015574	-	97	72.500	Ursus_maritimus
ENSCSAVG00000010348	-	95	78.307	ENSXETG00000004556	rab18	97	75.000	Xenopus_tropicalis
ENSCSAVG00000010348	-	94	75.532	ENSXMAG00000024122	rab18a	97	73.367	Xiphophorus_maculatus