EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 782 bases
Position: chrreftig_14:812867-813648
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017751	RNA_pol_Rbc25	PF08292.12	2.6e-36	1	1
ENSCSAVP00000017751	SHS2_Rpb7-N	PF03876.17	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017944	-	782	-	ENSCSAVP00000017751	204 (aa)	-	H2ZJI5

Gene Model

Click here to download ENSCSAVG00000010448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010448's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010448	-	99	67.980	ENSG00000100413	POLR3H	99	67.980	Homo_sapiens
ENSCSAVG00000010448	-	99	63.594	ENSAPOG00000011407	polr3h	100	62.212	Acanthochromis_polyacanthus
ENSCSAVG00000010448	-	99	67.488	ENSAMEG00000015630	POLR3H	99	67.488	Ailuropoda_melanoleuca
ENSCSAVG00000010448	-	99	66.010	ENSACIG00000010128	polr3h	100	66.010	Amphilophus_citrinellus
ENSCSAVG00000010448	-	99	64.953	ENSAOCG00000019002	polr3h	100	64.486	Amphiprion_ocellaris
ENSCSAVG00000010448	-	99	64.486	ENSAPEG00000012507	polr3h	100	64.019	Amphiprion_percula
ENSCSAVG00000010448	-	99	64.019	ENSATEG00000008085	polr3h	100	63.551	Anabas_testudineus
ENSCSAVG00000010448	-	99	64.904	ENSAPLG00000005063	POLR3H	99	64.904	Anas_platyrhynchos
ENSCSAVG00000010448	-	99	67.317	ENSACAG00000011213	POLR3H	100	68.447	Anolis_carolinensis
ENSCSAVG00000010448	-	99	67.980	ENSANAG00000025122	POLR3H	99	67.980	Aotus_nancymaae
ENSCSAVG00000010448	-	99	64.953	ENSACLG00000014650	polr3h	100	64.953	Astatotilapia_calliptera
ENSCSAVG00000010448	-	99	67.980	ENSAMXG00000015544	polr3h	100	67.488	Astyanax_mexicanus
ENSCSAVG00000010448	-	99	66.995	ENSBTAG00000005311	POLR3H	99	66.995	Bos_taurus
ENSCSAVG00000010448	-	99	37.931	WBGene00014111	rpc-25	82	37.255	Caenorhabditis_elegans
ENSCSAVG00000010448	-	99	67.488	ENSCJAG00000005072	POLR3H	100	67.157	Callithrix_jacchus
ENSCSAVG00000010448	-	99	66.010	ENSCAFG00000001053	POLR3H	99	66.010	Canis_familiaris
ENSCSAVG00000010448	-	99	66.010	ENSCAFG00020001964	POLR3H	99	66.010	Canis_lupus_dingo
ENSCSAVG00000010448	-	99	66.995	ENSCHIG00000013984	POLR3H	99	66.995	Capra_hircus
ENSCSAVG00000010448	-	99	67.488	ENSTSYG00000003484	POLR3H	99	67.488	Carlito_syrichta
ENSCSAVG00000010448	-	73	67.785	ENSCAPG00000003786	POLR3H	99	67.785	Cavia_aperea
ENSCSAVG00000010448	-	99	66.502	ENSCPOG00000012650	POLR3H	99	66.502	Cavia_porcellus
ENSCSAVG00000010448	-	99	67.980	ENSCCAG00000025802	POLR3H	99	67.980	Cebus_capucinus
ENSCSAVG00000010448	-	99	67.980	ENSCATG00000018316	POLR3H	99	67.980	Cercocebus_atys
ENSCSAVG00000010448	-	99	67.980	ENSCLAG00000016948	POLR3H	99	67.488	Chinchilla_lanigera
ENSCSAVG00000010448	-	99	67.980	ENSCSAG00000005798	POLR3H	86	67.980	Chlorocebus_sabaeus
ENSCSAVG00000010448	-	99	67.317	ENSCPBG00000020544	POLR3H	99	67.317	Chrysemys_picta_bellii
ENSCSAVG00000010448	-	100	88.293	ENSCING00000012767	-	100	88.293	Ciona_intestinalis
ENSCSAVG00000010448	-	99	67.488	ENSCANG00000035073	POLR3H	99	67.488	Colobus_angolensis_palliatus
ENSCSAVG00000010448	-	84	67.251	ENSCGRG00001023556	Polr3h	99	67.251	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010448	-	99	56.158	ENSCGRG00000017869	Polr3h	99	56.158	Cricetulus_griseus_crigri
ENSCSAVG00000010448	-	89	67.956	ENSCSEG00000006721	polr3h	87	66.298	Cynoglossus_semilaevis
ENSCSAVG00000010448	-	99	64.019	ENSCVAG00000010996	polr3h	100	63.551	Cyprinodon_variegatus
ENSCSAVG00000010448	-	99	64.815	ENSDARG00000102590	polr3h	100	64.486	Danio_rerio
ENSCSAVG00000010448	-	99	66.995	ENSDNOG00000025527	POLR3H	99	66.995	Dasypus_novemcinctus
ENSCSAVG00000010448	-	99	66.995	ENSDORG00000002215	Polr3h	99	66.995	Dipodomys_ordii
ENSCSAVG00000010448	-	99	52.358	FBgn0036188	CG7339	88	52.830	Drosophila_melanogaster
ENSCSAVG00000010448	-	99	64.532	ENSETEG00000010746	POLR3H	99	64.532	Echinops_telfairi
ENSCSAVG00000010448	-	99	64.840	ENSEBUG00000005511	polr3h	100	61.644	Eptatretus_burgeri
ENSCSAVG00000010448	-	99	66.995	ENSEASG00005001539	POLR3H	99	66.995	Equus_asinus_asinus
ENSCSAVG00000010448	-	99	58.049	ENSECAG00000019715	POLR3H	99	58.049	Equus_caballus
ENSCSAVG00000010448	-	99	64.216	ENSEEUG00000010464	POLR3H	99	64.706	Erinaceus_europaeus
ENSCSAVG00000010448	-	99	64.762	ENSELUG00000007834	polr3h	100	64.423	Esox_lucius
ENSCSAVG00000010448	-	99	67.488	ENSFCAG00000006684	POLR3H	99	67.488	Felis_catus
ENSCSAVG00000010448	-	99	67.317	ENSFALG00000011952	POLR3H	100	66.990	Ficedula_albicollis
ENSCSAVG00000010448	-	99	66.995	ENSFDAG00000008844	POLR3H	99	66.995	Fukomys_damarensis
ENSCSAVG00000010448	-	99	64.953	ENSFHEG00000020517	polr3h	100	62.844	Fundulus_heteroclitus
ENSCSAVG00000010448	-	99	62.150	ENSGMOG00000001934	polr3h	100	62.150	Gadus_morhua
ENSCSAVG00000010448	-	100	66.505	ENSGALG00000011947	POLR3H	100	66.505	Gallus_gallus
ENSCSAVG00000010448	-	99	65.421	ENSGAFG00000010908	polr3h	100	63.551	Gambusia_affinis
ENSCSAVG00000010448	-	99	61.682	ENSGACG00000007549	polr3h	100	61.682	Gasterosteus_aculeatus
ENSCSAVG00000010448	-	99	67.317	ENSGAGG00000017507	POLR3H	99	67.317	Gopherus_agassizii
ENSCSAVG00000010448	-	99	67.980	ENSGGOG00000038191	POLR3H	88	67.980	Gorilla_gorilla
ENSCSAVG00000010448	-	99	64.953	ENSHBUG00000017295	polr3h	100	64.953	Haplochromis_burtoni
ENSCSAVG00000010448	-	99	67.488	ENSHGLG00000014795	POLR3H	99	67.488	Heterocephalus_glaber_female
ENSCSAVG00000010448	-	99	67.488	ENSHGLG00100014750	POLR3H	99	67.488	Heterocephalus_glaber_male
ENSCSAVG00000010448	-	99	64.789	ENSHCOG00000006814	polr3h	100	63.850	Hippocampus_comes
ENSCSAVG00000010448	-	99	64.486	ENSIPUG00000019750	polr3h	100	64.953	Ictalurus_punctatus
ENSCSAVG00000010448	-	99	67.488	ENSSTOG00000016215	POLR3H	99	67.488	Ictidomys_tridecemlineatus
ENSCSAVG00000010448	-	99	66.995	ENSJJAG00000017986	Polr3h	99	66.995	Jaculus_jaculus
ENSCSAVG00000010448	-	99	64.486	ENSKMAG00000014797	polr3h	100	63.084	Kryptolebias_marmoratus
ENSCSAVG00000010448	-	99	63.054	ENSLBEG00000010889	polr3h	100	63.054	Labrus_bergylta
ENSCSAVG00000010448	-	99	67.633	ENSLACG00000011734	POLR3H	99	68.116	Latimeria_chalumnae
ENSCSAVG00000010448	-	84	71.930	ENSLOCG00000011621	polr3h	69	74.074	Lepisosteus_oculatus
ENSCSAVG00000010448	-	99	67.980	ENSLAFG00000006033	POLR3H	99	67.980	Loxodonta_africana
ENSCSAVG00000010448	-	99	67.980	ENSMFAG00000001153	POLR3H	99	67.980	Macaca_fascicularis
ENSCSAVG00000010448	-	99	67.980	ENSMMUG00000001459	POLR3H	99	67.980	Macaca_mulatta
ENSCSAVG00000010448	-	99	67.980	ENSMNEG00000022264	POLR3H	99	67.980	Macaca_nemestrina
ENSCSAVG00000010448	-	82	69.461	ENSMLEG00000024568	POLR3H	99	69.461	Mandrillus_leucophaeus
ENSCSAVG00000010448	-	99	64.953	ENSMAMG00000007445	polr3h	100	62.844	Mastacembelus_armatus
ENSCSAVG00000010448	-	99	64.953	ENSMZEG00005003756	polr3h	100	64.953	Maylandia_zebra
ENSCSAVG00000010448	-	99	64.904	ENSMGAG00000012126	POLR3H	99	64.904	Meleagris_gallopavo
ENSCSAVG00000010448	-	99	67.488	ENSMAUG00000022215	Polr3h	99	67.488	Mesocricetus_auratus
ENSCSAVG00000010448	-	99	67.488	ENSMICG00000013546	POLR3H	99	67.488	Microcebus_murinus
ENSCSAVG00000010448	-	99	67.980	ENSMOCG00000018747	Polr3h	99	67.980	Microtus_ochrogaster
ENSCSAVG00000010448	-	99	65.517	ENSMMOG00000002705	polr3h	100	65.517	Mola_mola
ENSCSAVG00000010448	-	99	67.488	ENSMODG00000016563	POLR3H	99	67.488	Monodelphis_domestica
ENSCSAVG00000010448	-	99	66.010	ENSMALG00000013403	polr3h	100	65.025	Monopterus_albus
ENSCSAVG00000010448	-	99	67.488	MGP_CAROLIEiJ_G0020063	Polr3h	99	67.488	Mus_caroli
ENSCSAVG00000010448	-	99	67.488	ENSMUSG00000022476	Polr3h	99	67.488	Mus_musculus
ENSCSAVG00000010448	-	99	67.488	MGP_PahariEiJ_G0020065	Polr3h	99	67.488	Mus_pahari
ENSCSAVG00000010448	-	99	67.488	MGP_SPRETEiJ_G0020964	Polr3h	99	67.488	Mus_spretus
ENSCSAVG00000010448	-	99	67.488	ENSMPUG00000016395	POLR3H	99	67.488	Mustela_putorius_furo
ENSCSAVG00000010448	-	99	66.010	ENSMLUG00000002487	POLR3H	99	66.010	Myotis_lucifugus
ENSCSAVG00000010448	-	99	67.488	ENSNGAG00000015009	Polr3h	99	67.488	Nannospalax_galili
ENSCSAVG00000010448	-	89	70.166	ENSNBRG00000003286	polr3h	78	68.508	Neolamprologus_brichardi
ENSCSAVG00000010448	-	99	67.488	ENSNLEG00000015536	POLR3H	99	67.488	Nomascus_leucogenys
ENSCSAVG00000010448	-	99	63.054	ENSMEUG00000002041	POLR3H	99	63.054	Notamacropus_eugenii
ENSCSAVG00000010448	-	99	64.953	ENSONIG00000008444	polr3h	100	64.953	Oreochromis_niloticus
ENSCSAVG00000010448	-	94	67.188	ENSOANG00000004374	-	95	67.188	Ornithorhynchus_anatinus
ENSCSAVG00000010448	-	99	66.010	ENSOCUG00000007275	POLR3H	99	66.010	Oryctolagus_cuniculus
ENSCSAVG00000010448	-	99	64.019	ENSORLG00000014160	polr3h	100	62.617	Oryzias_latipes
ENSCSAVG00000010448	-	99	64.486	ENSORLG00020007765	polr3h	100	63.084	Oryzias_latipes_hni
ENSCSAVG00000010448	-	99	64.486	ENSORLG00015019039	polr3h	100	63.084	Oryzias_latipes_hsok
ENSCSAVG00000010448	-	99	64.019	ENSOMEG00000005764	polr3h	100	64.019	Oryzias_melastigma
ENSCSAVG00000010448	-	99	60.099	ENSOGAG00000030416	-	99	60.099	Otolemur_garnettii
ENSCSAVG00000010448	-	99	67.488	ENSOGAG00000002850	-	99	67.488	Otolemur_garnettii
ENSCSAVG00000010448	-	99	66.995	ENSOARG00000018319	POLR3H	99	66.995	Ovis_aries
ENSCSAVG00000010448	-	99	67.980	ENSPPAG00000031000	POLR3H	99	67.980	Pan_paniscus
ENSCSAVG00000010448	-	99	67.488	ENSPPRG00000005361	POLR3H	99	67.488	Panthera_pardus
ENSCSAVG00000010448	-	99	67.488	ENSPTIG00000016286	POLR3H	99	67.488	Panthera_tigris_altaica
ENSCSAVG00000010448	-	99	67.980	ENSPTRG00000051865	POLR3H	99	67.980	Pan_troglodytes
ENSCSAVG00000010448	-	99	67.980	ENSPANG00000015758	POLR3H	99	67.980	Papio_anubis
ENSCSAVG00000010448	-	99	64.904	ENSPKIG00000008527	polr3h	100	64.904	Paramormyrops_kingsleyae
ENSCSAVG00000010448	-	99	67.805	ENSPSIG00000008284	POLR3H	89	66.829	Pelodiscus_sinensis
ENSCSAVG00000010448	-	88	68.333	ENSPMGG00000018036	polr3h	64	72.840	Periophthalmus_magnuspinnatus
ENSCSAVG00000010448	-	99	66.995	ENSPEMG00000000726	Polr3h	99	66.995	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010448	-	82	67.222	ENSPMAG00000007847	polr3h	96	66.111	Petromyzon_marinus
ENSCSAVG00000010448	-	99	50.000	ENSPCIG00000026413	POLR3H	99	50.000	Phascolarctos_cinereus
ENSCSAVG00000010448	-	99	62.162	ENSPFOG00000013681	polr3h	100	61.538	Poecilia_formosa
ENSCSAVG00000010448	-	99	63.927	ENSPLAG00000017503	polr3h	100	63.303	Poecilia_latipinna
ENSCSAVG00000010448	-	99	63.470	ENSPMEG00000018334	polr3h	100	62.844	Poecilia_mexicana
ENSCSAVG00000010448	-	99	66.995	ENSPPYG00000011872	-	99	66.995	Pongo_abelii
ENSCSAVG00000010448	-	99	66.010	ENSPPYG00000010689	-	99	66.010	Pongo_abelii
ENSCSAVG00000010448	-	58	70.588	ENSPCAG00000009882	POLR3H	58	70.588	Procavia_capensis
ENSCSAVG00000010448	-	99	67.488	ENSPCOG00000013751	POLR3H	99	67.488	Propithecus_coquereli
ENSCSAVG00000010448	-	99	69.608	ENSPVAG00000001164	POLR3H	99	67.488	Pteropus_vampyrus
ENSCSAVG00000010448	-	99	64.953	ENSPNYG00000024040	polr3h	100	64.953	Pundamilia_nyererei
ENSCSAVG00000010448	-	99	67.606	ENSPNAG00000004860	polr3h	100	65.258	Pygocentrus_nattereri
ENSCSAVG00000010448	-	99	67.488	ENSRNOG00000004471	Polr3h	99	67.488	Rattus_norvegicus
ENSCSAVG00000010448	-	99	60.591	ENSRBIG00000040089	POLR3H	99	60.591	Rhinopithecus_bieti
ENSCSAVG00000010448	-	99	67.980	ENSRROG00000033728	POLR3H	99	67.980	Rhinopithecus_roxellana
ENSCSAVG00000010448	-	99	37.383	YKL144C	RPC25	99	37.383	Saccharomyces_cerevisiae
ENSCSAVG00000010448	-	99	67.980	ENSSBOG00000020652	POLR3H	99	67.980	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010448	-	99	66.010	ENSSHAG00000010196	POLR3H	99	66.010	Sarcophilus_harrisii
ENSCSAVG00000010448	-	99	65.385	ENSSFOG00015011506	polr3h	100	65.385	Scleropages_formosus
ENSCSAVG00000010448	-	99	60.731	ENSSMAG00000005784	polr3h	100	61.215	Scophthalmus_maximus
ENSCSAVG00000010448	-	99	62.557	ENSSDUG00000014946	polr3h	100	62.326	Seriola_dumerili
ENSCSAVG00000010448	-	99	62.100	ENSSLDG00000018207	polr3h	100	61.860	Seriola_lalandi_dorsalis
ENSCSAVG00000010448	-	99	69.951	ENSSPUG00000011619	POLR3H	99	69.951	Sphenodon_punctatus
ENSCSAVG00000010448	-	99	64.019	ENSSPAG00000017974	polr3h	100	62.617	Stegastes_partitus
ENSCSAVG00000010448	-	99	66.010	ENSSSCG00000000063	POLR3H	99	66.010	Sus_scrofa
ENSCSAVG00000010448	-	99	66.827	ENSTGUG00000009901	POLR3H	100	66.507	Taeniopygia_guttata
ENSCSAVG00000010448	-	99	63.721	ENSTRUG00000004012	polr3h	100	62.326	Takifugu_rubripes
ENSCSAVG00000010448	-	99	63.426	ENSTNIG00000004956	polr3h	100	61.818	Tetraodon_nigroviridis
ENSCSAVG00000010448	-	99	68.473	ENSTBEG00000011425	POLR3H	99	66.010	Tupaia_belangeri
ENSCSAVG00000010448	-	81	68.675	ENSTTRG00000003373	POLR3H	99	68.675	Tursiops_truncatus
ENSCSAVG00000010448	-	99	67.488	ENSUAMG00000022585	POLR3H	99	67.488	Ursus_americanus
ENSCSAVG00000010448	-	99	61.084	ENSUMAG00000021018	POLR3H	99	61.084	Ursus_maritimus
ENSCSAVG00000010448	-	99	66.010	ENSVVUG00000003543	POLR3H	99	66.010	Vulpes_vulpes
ENSCSAVG00000010448	-	99	67.476	ENSXETG00000034216	polr3h	99	67.476	Xenopus_tropicalis
ENSCSAVG00000010448	-	99	65.517	ENSXCOG00000016022	polr3h	100	66.502	Xiphophorus_couchianus
ENSCSAVG00000010448	-	99	63.182	ENSXMAG00000006921	polr3h	100	63.303	Xiphophorus_maculatus