EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010472 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 11849 bases
Position: chrreftig_30:3512307-3524155
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017790	Ribonuc_2-5A	PF06479.12	4.1e-39	1	1
ENSCSAVP00000017789	Ribonuc_2-5A	PF06479.12	5.8e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017984	-	2845	-	ENSCSAVP00000017790	926 (aa)	-	H2ZJM4
ENSCSAVT00000017983	-	1932	-	ENSCSAVP00000017789	422 (aa)	-	H2ZJM3

Gene Model

Click here to download ENSCSAVG00000010472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010472	-	74	60.247	ENSG00000178607	ERN1	95	45.825	Homo_sapiens
ENSCSAVG00000010472	-	74	60.247	ENSAMEG00000002855	ERN1	96	45.464	Ailuropoda_melanoleuca
ENSCSAVG00000010472	-	74	60.149	ENSAPLG00000007775	ERN1	71	60.149	Anas_platyrhynchos
ENSCSAVG00000010472	-	74	60.149	ENSACAG00000016707	ERN1	69	60.149	Anolis_carolinensis
ENSCSAVG00000010472	-	100	45.559	ENSANAG00000019640	ERN1	95	45.464	Aotus_nancymaae
ENSCSAVG00000010472	-	100	46.090	ENSBTAG00000016799	ERN1	95	46.306	Bos_taurus
ENSCSAVG00000010472	-	74	60.247	ENSCJAG00000019415	ERN1	96	45.890	Callithrix_jacchus
ENSCSAVG00000010472	-	74	60.000	ENSCAFG00000011784	ERN1	97	45.729	Canis_familiaris
ENSCSAVG00000010472	-	74	60.000	ENSCAFG00020026580	ERN1	94	45.729	Canis_lupus_dingo
ENSCSAVG00000010472	-	100	46.090	ENSCHIG00000025852	ERN1	97	46.306	Capra_hircus
ENSCSAVG00000010472	-	100	45.798	ENSTSYG00000029092	ERN1	97	45.855	Carlito_syrichta
ENSCSAVG00000010472	-	85	59.268	ENSCAPG00000011651	ERN1	70	59.268	Cavia_aperea
ENSCSAVG00000010472	-	74	59.268	ENSCPOG00000000570	ERN1	70	59.268	Cavia_porcellus
ENSCSAVG00000010472	-	71	60.247	ENSCCAG00000034845	ERN1	98	43.171	Cebus_capucinus
ENSCSAVG00000010472	-	74	60.494	ENSCATG00000040819	ERN1	95	45.929	Cercocebus_atys
ENSCSAVG00000010472	-	74	59.753	ENSCLAG00000006912	ERN1	78	59.753	Chinchilla_lanigera
ENSCSAVG00000010472	-	74	60.494	ENSCSAG00000003990	ERN1	95	45.994	Chlorocebus_sabaeus
ENSCSAVG00000010472	-	74	60.494	ENSCPBG00000009183	ERN1	70	60.494	Chrysemys_picta_bellii
ENSCSAVG00000010472	-	74	60.494	ENSCANG00000032329	ERN1	95	45.946	Colobus_angolensis_palliatus
ENSCSAVG00000010472	-	74	60.000	ENSCGRG00001003211	Ern1	95	45.833	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010472	-	74	60.000	ENSCGRG00000010036	Ern1	95	45.833	Cricetulus_griseus_crigri
ENSCSAVG00000010472	-	73	60.100	ENSDNOG00000009467	ERN1	95	45.303	Dasypus_novemcinctus
ENSCSAVG00000010472	-	74	59.753	ENSETEG00000004162	ERN1	92	42.767	Echinops_telfairi
ENSCSAVG00000010472	-	74	60.247	ENSEASG00005014413	ERN1	82	60.247	Equus_asinus_asinus
ENSCSAVG00000010472	-	74	60.494	ENSECAG00000011262	ERN1	69	60.494	Equus_caballus
ENSCSAVG00000010472	-	63	66.292	ENSEEUG00000006091	ERN1	60	66.292	Erinaceus_europaeus
ENSCSAVG00000010472	-	74	60.247	ENSFCAG00000003507	ERN1	96	45.938	Felis_catus
ENSCSAVG00000010472	-	74	61.139	ENSFALG00000002305	ERN1	69	61.139	Ficedula_albicollis
ENSCSAVG00000010472	-	74	59.259	ENSFDAG00000013825	ERN1	70	59.259	Fukomys_damarensis
ENSCSAVG00000010472	-	79	60.149	ENSGALG00000003476	ERN1	77	60.149	Gallus_gallus
ENSCSAVG00000010472	-	59	60.247	ENSGAGG00000006329	-	68	60.247	Gopherus_agassizii
ENSCSAVG00000010472	-	74	60.247	ENSGGOG00000006532	ERN1	96	45.842	Gorilla_gorilla
ENSCSAVG00000010472	-	74	60.000	ENSHGLG00000010207	ERN1	95	45.938	Heterocephalus_glaber_female
ENSCSAVG00000010472	-	74	60.000	ENSHGLG00100019030	ERN1	97	45.351	Heterocephalus_glaber_male
ENSCSAVG00000010472	-	74	60.247	ENSSTOG00000009067	ERN1	69	60.247	Ictidomys_tridecemlineatus
ENSCSAVG00000010472	-	74	57.213	ENSLACG00000016078	ERN1	71	57.213	Latimeria_chalumnae
ENSCSAVG00000010472	-	74	60.149	ENSLOCG00000013703	ERN1	70	59.902	Lepisosteus_oculatus
ENSCSAVG00000010472	-	74	60.247	ENSLAFG00000008504	ERN1	97	45.625	Loxodonta_africana
ENSCSAVG00000010472	-	74	60.494	ENSMFAG00000040147	ERN1	96	45.929	Macaca_fascicularis
ENSCSAVG00000010472	-	74	60.494	ENSMMUG00000015185	ERN1	95	45.929	Macaca_mulatta
ENSCSAVG00000010472	-	74	60.494	ENSMNEG00000044337	ERN1	96	45.929	Macaca_nemestrina
ENSCSAVG00000010472	-	74	60.494	ENSMLEG00000033739	ERN1	97	45.890	Mandrillus_leucophaeus
ENSCSAVG00000010472	-	74	60.396	ENSMGAG00000007831	ERN1	70	60.396	Meleagris_gallopavo
ENSCSAVG00000010472	-	74	60.494	ENSMICG00000010050	ERN1	95	45.833	Microcebus_murinus
ENSCSAVG00000010472	-	74	59.506	ENSMOCG00000003999	Ern1	95	45.625	Microtus_ochrogaster
ENSCSAVG00000010472	-	100	43.555	ENSMODG00000009349	ERN1	95	43.555	Monodelphis_domestica
ENSCSAVG00000010472	-	74	59.753	MGP_CAROLIEiJ_G0017324	Ern1	69	59.753	Mus_caroli
ENSCSAVG00000010472	-	74	59.753	ENSMUSG00000020715	Ern1	69	59.753	Mus_musculus
ENSCSAVG00000010472	-	74	59.753	MGP_PahariEiJ_G0018454	Ern1	69	59.753	Mus_pahari
ENSCSAVG00000010472	-	74	59.753	MGP_SPRETEiJ_G0018168	Ern1	69	59.753	Mus_spretus
ENSCSAVG00000010472	-	74	60.000	ENSMPUG00000014770	ERN1	95	45.455	Mustela_putorius_furo
ENSCSAVG00000010472	-	74	59.506	ENSMLUG00000016729	ERN1	95	45.768	Myotis_lucifugus
ENSCSAVG00000010472	-	74	59.506	ENSNGAG00000019135	Ern1	95	45.521	Nannospalax_galili
ENSCSAVG00000010472	-	74	60.247	ENSNLEG00000015074	ERN1	96	45.890	Nomascus_leucogenys
ENSCSAVG00000010472	-	60	65.854	ENSMEUG00000008103	ERN1	57	65.854	Notamacropus_eugenii
ENSCSAVG00000010472	-	74	59.012	ENSOPRG00000008129	ERN1	97	42.917	Ochotona_princeps
ENSCSAVG00000010472	-	74	59.259	ENSODEG00000007755	ERN1	69	59.259	Octodon_degus
ENSCSAVG00000010472	-	69	59.413	ENSOANG00000008033	ERN1	71	59.413	Ornithorhynchus_anatinus
ENSCSAVG00000010472	-	74	59.506	ENSOCUG00000012090	ERN1	70	58.924	Oryctolagus_cuniculus
ENSCSAVG00000010472	-	69	59.753	ENSOGAG00000003863	ERN1	98	44.809	Otolemur_garnettii
ENSCSAVG00000010472	-	100	46.090	ENSOARG00000014398	ERN1	95	46.306	Ovis_aries
ENSCSAVG00000010472	-	74	60.247	ENSPPAG00000031054	ERN1	96	45.720	Pan_paniscus
ENSCSAVG00000010472	-	74	60.494	ENSPPRG00000009424	ERN1	96	46.042	Panthera_pardus
ENSCSAVG00000010472	-	74	60.247	ENSPTIG00000000179	ERN1	95	45.833	Panthera_tigris_altaica
ENSCSAVG00000010472	-	74	60.247	ENSPTRG00000009535	ERN1	96	45.720	Pan_troglodytes
ENSCSAVG00000010472	-	74	60.494	ENSPANG00000020738	ERN1	96	45.890	Papio_anubis
ENSCSAVG00000010472	-	74	60.494	ENSPSIG00000017320	ERN1	70	60.494	Pelodiscus_sinensis
ENSCSAVG00000010472	-	74	59.753	ENSPEMG00000002339	Ern1	69	59.753	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010472	-	74	60.049	ENSPCIG00000005771	ERN1	69	60.049	Phascolarctos_cinereus
ENSCSAVG00000010472	-	74	60.247	ENSPPYG00000008539	ERN1	98	43.468	Pongo_abelii
ENSCSAVG00000010472	-	66	54.703	ENSPCAG00000016275	ERN1	67	54.703	Procavia_capensis
ENSCSAVG00000010472	-	71	60.247	ENSPCOG00000023564	ERN1	96	45.005	Propithecus_coquereli
ENSCSAVG00000010472	-	71	59.894	ENSPVAG00000000484	ERN1	67	59.894	Pteropus_vampyrus
ENSCSAVG00000010472	-	74	59.753	ENSRNOG00000012864	Ern1	70	59.753	Rattus_norvegicus
ENSCSAVG00000010472	-	100	46.098	ENSRBIG00000033096	ERN1	95	45.994	Rhinopithecus_bieti
ENSCSAVG00000010472	-	74	60.494	ENSRROG00000017577	ERN1	98	43.664	Rhinopithecus_roxellana
ENSCSAVG00000010472	-	74	56.049	ENSSBOG00000035494	ERN1	98	43.433	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010472	-	71	59.753	ENSSHAG00000014118	ERN1	70	59.753	Sarcophilus_harrisii
ENSCSAVG00000010472	-	81	60.194	ENSSFOG00015005661	ern1	94	45.969	Scleropages_formosus
ENSCSAVG00000010472	-	74	60.644	ENSSPUG00000004797	ERN1	73	60.644	Sphenodon_punctatus
ENSCSAVG00000010472	-	74	60.049	ENSSSCG00000017279	ERN1	96	45.938	Sus_scrofa
ENSCSAVG00000010472	-	74	60.891	ENSTGUG00000004752	-	71	60.891	Taeniopygia_guttata
ENSCSAVG00000010472	-	74	55.556	ENSTTRG00000007006	ERN1	70	55.556	Tursiops_truncatus
ENSCSAVG00000010472	-	74	60.247	ENSUAMG00000007437	ERN1	95	44.885	Ursus_americanus
ENSCSAVG00000010472	-	76	58.451	ENSUMAG00000017551	ERN1	91	58.451	Ursus_maritimus
ENSCSAVG00000010472	-	74	60.000	ENSVVUG00000006214	ERN1	94	45.729	Vulpes_vulpes