EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 1939 bases
Position: chrreftig_9:1815708-1817646
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017796	zf-CCHC	PF00098.23	1.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000017990	-	791	-	ENSCSAVP00000017796	222 (aa)	-	H2ZJN0

Gene Model

Click here to download ENSCSAVG00000010478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010478's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010478	-	83	48.404	ENSG00000131732	ZCCHC9	66	48.404	Homo_sapiens
ENSCSAVG00000010478	-	79	48.023	ENSAPOG00000010630	zcchc9	63	48.023	Acanthochromis_polyacanthus
ENSCSAVG00000010478	-	83	50.000	ENSAMEG00000015854	ZCCHC9	66	50.000	Ailuropoda_melanoleuca
ENSCSAVG00000010478	-	79	50.282	ENSACIG00000008121	zcchc9	61	51.124	Amphilophus_citrinellus
ENSCSAVG00000010478	-	57	51.181	ENSAOCG00000011664	zcchc9	50	57.037	Amphiprion_ocellaris
ENSCSAVG00000010478	-	79	49.153	ENSATEG00000004480	zcchc9	60	49.153	Anabas_testudineus
ENSCSAVG00000010478	-	68	51.299	ENSAPLG00000005968	ZCCHC9	100	51.299	Anas_platyrhynchos
ENSCSAVG00000010478	-	62	58.571	ENSACAG00000010965	ZCCHC9	64	51.705	Anolis_carolinensis
ENSCSAVG00000010478	-	84	43.694	ENSANAG00000022269	-	89	43.694	Aotus_nancymaae
ENSCSAVG00000010478	-	83	50.000	ENSANAG00000021689	-	66	50.000	Aotus_nancymaae
ENSCSAVG00000010478	-	79	49.153	ENSACLG00000009042	zcchc9	58	49.153	Astatotilapia_calliptera
ENSCSAVG00000010478	-	58	56.154	ENSAMXG00000043747	zcchc9	51	56.154	Astyanax_mexicanus
ENSCSAVG00000010478	-	99	41.367	ENSBTAG00000005265	ZCCHC9	100	39.785	Bos_taurus
ENSCSAVG00000010478	-	83	52.381	ENSCJAG00000042621	ZCCHC9	66	52.381	Callithrix_jacchus
ENSCSAVG00000010478	-	83	50.000	ENSCAFG00000008703	ZCCHC9	66	50.000	Canis_familiaris
ENSCSAVG00000010478	-	83	50.000	ENSCAFG00020002911	ZCCHC9	66	50.000	Canis_lupus_dingo
ENSCSAVG00000010478	-	100	41.696	ENSCHIG00000024514	ZCCHC9	100	41.696	Capra_hircus
ENSCSAVG00000010478	-	83	51.832	ENSTSYG00000012423	-	67	51.832	Carlito_syrichta
ENSCSAVG00000010478	-	100	44.492	ENSTSYG00000034641	-	100	44.492	Carlito_syrichta
ENSCSAVG00000010478	-	86	51.269	ENSCPOG00000003947	ZCCHC9	64	62.319	Cavia_porcellus
ENSCSAVG00000010478	-	83	51.852	ENSCCAG00000034082	ZCCHC9	66	51.852	Cebus_capucinus
ENSCSAVG00000010478	-	83	48.404	ENSCATG00000042586	-	67	48.404	Cercocebus_atys
ENSCSAVG00000010478	-	86	48.469	ENSCLAG00000005289	ZCCHC9	64	62.319	Chinchilla_lanigera
ENSCSAVG00000010478	-	83	47.872	ENSCSAG00000014955	-	67	47.872	Chlorocebus_sabaeus
ENSCSAVG00000010478	-	83	45.213	ENSCSAG00000019139	-	67	45.213	Chlorocebus_sabaeus
ENSCSAVG00000010478	-	90	47.059	ENSCHOG00000005268	ZCCHC9	71	47.059	Choloepus_hoffmanni
ENSCSAVG00000010478	-	62	60.714	ENSCPBG00000010819	ZCCHC9	63	54.545	Chrysemys_picta_bellii
ENSCSAVG00000010478	-	100	71.171	ENSCING00000008173	-	100	71.171	Ciona_intestinalis
ENSCSAVG00000010478	-	51	30.973	ENSCING00000021342	-	57	31.092	Ciona_intestinalis
ENSCSAVG00000010478	-	83	51.323	ENSCANG00000025716	-	67	51.323	Colobus_angolensis_palliatus
ENSCSAVG00000010478	-	100	38.351	ENSCGRG00001018367	Zcchc9	100	40.989	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010478	-	100	38.351	ENSCGRG00000016428	Zcchc9	100	40.989	Cricetulus_griseus_crigri
ENSCSAVG00000010478	-	79	46.927	ENSCVAG00000019704	zcchc9	61	46.927	Cyprinodon_variegatus
ENSCSAVG00000010478	-	67	55.556	ENSDARG00000007531	zcchc9	60	55.556	Danio_rerio
ENSCSAVG00000010478	-	83	50.000	ENSDNOG00000016708	ZCCHC9	66	50.000	Dasypus_novemcinctus
ENSCSAVG00000010478	-	83	48.936	ENSDORG00000001300	Zcchc9	64	60.870	Dipodomys_ordii
ENSCSAVG00000010478	-	83	51.323	ENSEASG00005004088	ZCCHC9	66	51.323	Equus_asinus_asinus
ENSCSAVG00000010478	-	82	52.128	ENSECAG00000023186	ZCCHC9	66	52.128	Equus_caballus
ENSCSAVG00000010478	-	68	50.993	ENSEEUG00000010726	-	100	50.993	Erinaceus_europaeus
ENSCSAVG00000010478	-	83	52.381	ENSFCAG00000033419	ZCCHC9	66	52.381	Felis_catus
ENSCSAVG00000010478	-	70	49.359	ENSFALG00000012709	ZCCHC9	53	45.263	Ficedula_albicollis
ENSCSAVG00000010478	-	79	48.295	ENSFHEG00000012337	zcchc9	61	48.295	Fundulus_heteroclitus
ENSCSAVG00000010478	-	78	50.000	ENSGMOG00000016323	zcchc9	78	50.000	Gadus_morhua
ENSCSAVG00000010478	-	78	50.286	ENSGALG00000015603	ZCCHC9	71	50.286	Gallus_gallus
ENSCSAVG00000010478	-	59	61.069	ENSGAGG00000014018	ZCCHC9	55	61.069	Gopherus_agassizii
ENSCSAVG00000010478	-	83	48.404	ENSGGOG00000013790	ZCCHC9	66	48.404	Gorilla_gorilla
ENSCSAVG00000010478	-	71	47.799	ENSHBUG00000007612	zcchc9	97	52.893	Haplochromis_burtoni
ENSCSAVG00000010478	-	62	39.568	ENSHGLG00000005793	-	100	39.568	Heterocephalus_glaber_female
ENSCSAVG00000010478	-	62	39.568	ENSHGLG00100001090	-	100	39.568	Heterocephalus_glaber_male
ENSCSAVG00000010478	-	87	45.960	ENSHCOG00000001696	zcchc9	70	45.960	Hippocampus_comes
ENSCSAVG00000010478	-	59	59.701	ENSIPUG00000008877	zcchc9	51	59.701	Ictalurus_punctatus
ENSCSAVG00000010478	-	83	52.604	ENSSTOG00000001407	ZCCHC9	64	62.319	Ictidomys_tridecemlineatus
ENSCSAVG00000010478	-	83	48.936	ENSJJAG00000015479	Zcchc9	64	60.870	Jaculus_jaculus
ENSCSAVG00000010478	-	71	47.799	ENSKMAG00000008955	zcchc9	61	50.282	Kryptolebias_marmoratus
ENSCSAVG00000010478	-	78	50.000	ENSLACG00000009223	ZCCHC9	61	50.000	Latimeria_chalumnae
ENSCSAVG00000010478	-	78	49.425	ENSLOCG00000005331	zcchc9	65	49.425	Lepisosteus_oculatus
ENSCSAVG00000010478	-	83	51.064	ENSLAFG00000012763	ZCCHC9	67	51.064	Loxodonta_africana
ENSCSAVG00000010478	-	83	48.404	ENSMFAG00000001943	ZCCHC9	67	48.404	Macaca_fascicularis
ENSCSAVG00000010478	-	83	47.872	ENSMMUG00000020655	ZCCHC9	67	47.872	Macaca_mulatta
ENSCSAVG00000010478	-	83	48.404	ENSMNEG00000040582	-	67	48.404	Macaca_nemestrina
ENSCSAVG00000010478	-	83	48.404	ENSMLEG00000038748	-	67	48.404	Mandrillus_leucophaeus
ENSCSAVG00000010478	-	79	49.153	ENSMZEG00005011747	zcchc9	57	49.153	Maylandia_zebra
ENSCSAVG00000010478	-	59	56.391	ENSMGAG00000006841	ZCCHC9	65	56.296	Meleagris_gallopavo
ENSCSAVG00000010478	-	83	49.215	ENSMAUG00000022026	Zcchc9	81	52.381	Mesocricetus_auratus
ENSCSAVG00000010478	-	100	33.088	ENSMICG00000016266	-	100	33.456	Microcebus_murinus
ENSCSAVG00000010478	-	73	51.205	ENSMICG00000029554	-	66	48.936	Microcebus_murinus
ENSCSAVG00000010478	-	83	49.735	ENSMOCG00000012433	Zcchc9	64	59.420	Microtus_ochrogaster
ENSCSAVG00000010478	-	87	48.469	ENSMODG00000020261	-	71	48.469	Monodelphis_domestica
ENSCSAVG00000010478	-	78	51.149	MGP_CAROLIEiJ_G0018764	Zcchc9	100	38.849	Mus_caroli
ENSCSAVG00000010478	-	83	47.872	ENSMUSG00000021621	Zcchc9	100	37.410	Mus_musculus
ENSCSAVG00000010478	-	83	47.340	MGP_PahariEiJ_G0015843	Zcchc9	64	56.522	Mus_pahari
ENSCSAVG00000010478	-	100	38.267	MGP_SPRETEiJ_G0019648	Zcchc9	100	38.267	Mus_spretus
ENSCSAVG00000010478	-	60	59.854	ENSMPUG00000008276	ZCCHC9	53	59.854	Mustela_putorius_furo
ENSCSAVG00000010478	-	79	50.568	ENSMLUG00000001886	ZCCHC9	62	50.568	Myotis_lucifugus
ENSCSAVG00000010478	-	78	50.286	ENSNGAG00000017736	Zcchc9	64	59.420	Nannospalax_galili
ENSCSAVG00000010478	-	100	40.000	ENSNBRG00000005258	zcchc9	97	52.893	Neolamprologus_brichardi
ENSCSAVG00000010478	-	83	48.404	ENSNLEG00000029214	ZCCHC9	66	48.404	Nomascus_leucogenys
ENSCSAVG00000010478	-	78	52.273	ENSMEUG00000011005	ZCCHC9	63	52.273	Notamacropus_eugenii
ENSCSAVG00000010478	-	78	44.000	ENSOPRG00000004474	ZCCHC9	62	44.000	Ochotona_princeps
ENSCSAVG00000010478	-	79	49.153	ENSONIG00000011366	zcchc9	54	49.153	Oreochromis_niloticus
ENSCSAVG00000010478	-	82	51.064	ENSOANG00000014769	ZCCHC9	66	50.794	Ornithorhynchus_anatinus
ENSCSAVG00000010478	-	86	48.969	ENSOCUG00000011215	ZCCHC9	71	48.969	Oryctolagus_cuniculus
ENSCSAVG00000010478	-	67	49.333	ENSOMEG00000004423	zcchc9	58	49.342	Oryzias_melastigma
ENSCSAVG00000010478	-	100	34.074	ENSOGAG00000026127	-	100	34.815	Otolemur_garnettii
ENSCSAVG00000010478	-	61	50.360	ENSOGAG00000026324	-	66	42.857	Otolemur_garnettii
ENSCSAVG00000010478	-	100	40.143	ENSOGAG00000002543	-	100	40.143	Otolemur_garnettii
ENSCSAVG00000010478	-	82	53.191	ENSOARG00000015219	ZCCHC9	65	53.191	Ovis_aries
ENSCSAVG00000010478	-	83	48.404	ENSPPAG00000041281	ZCCHC9	66	48.404	Pan_paniscus
ENSCSAVG00000010478	-	83	52.381	ENSPPRG00000023474	ZCCHC9	66	52.381	Panthera_pardus
ENSCSAVG00000010478	-	83	52.381	ENSPTIG00000017303	ZCCHC9	66	52.381	Panthera_tigris_altaica
ENSCSAVG00000010478	-	83	48.404	ENSPTRG00000017047	ZCCHC9	66	48.404	Pan_troglodytes
ENSCSAVG00000010478	-	83	48.404	ENSPANG00000013570	-	67	48.404	Papio_anubis
ENSCSAVG00000010478	-	78	55.114	ENSPSIG00000015854	ZCCHC9	63	55.114	Pelodiscus_sinensis
ENSCSAVG00000010478	-	56	60.800	ENSPMGG00000000044	zcchc9	50	60.800	Periophthalmus_magnuspinnatus
ENSCSAVG00000010478	-	83	48.404	ENSPEMG00000016614	Zcchc9	64	59.420	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010478	-	77	52.907	ENSPCIG00000013208	ZCCHC9	57	52.907	Phascolarctos_cinereus
ENSCSAVG00000010478	-	60	49.254	ENSPFOG00000004364	zcchc9	56	51.316	Poecilia_formosa
ENSCSAVG00000010478	-	60	49.254	ENSPMEG00000007672	zcchc9	55	56.716	Poecilia_mexicana
ENSCSAVG00000010478	-	60	49.254	ENSPREG00000013644	zcchc9	56	51.316	Poecilia_reticulata
ENSCSAVG00000010478	-	83	48.936	ENSPPYG00000015604	ZCCHC9	66	48.936	Pongo_abelii
ENSCSAVG00000010478	-	68	50.993	ENSPCOG00000018504	ZCCHC9	100	50.993	Propithecus_coquereli
ENSCSAVG00000010478	-	79	49.153	ENSPNYG00000011001	zcchc9	61	49.153	Pundamilia_nyererei
ENSCSAVG00000010478	-	83	48.404	ENSRNOG00000051682	Zcchc9	66	48.404	Rattus_norvegicus
ENSCSAVG00000010478	-	77	43.578	ENSRBIG00000036904	-	85	43.578	Rhinopithecus_bieti
ENSCSAVG00000010478	-	83	47.872	ENSRBIG00000040955	-	67	47.872	Rhinopithecus_bieti
ENSCSAVG00000010478	-	77	43.578	ENSRROG00000045436	-	98	43.578	Rhinopithecus_roxellana
ENSCSAVG00000010478	-	83	47.368	ENSRROG00000029012	-	67	47.368	Rhinopithecus_roxellana
ENSCSAVG00000010478	-	83	47.872	ENSRROG00000042005	-	67	47.872	Rhinopithecus_roxellana
ENSCSAVG00000010478	-	60	30.189	YNL255C	-	86	30.189	Saccharomyces_cerevisiae
ENSCSAVG00000010478	-	83	49.468	ENSSBOG00000034293	-	66	49.468	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010478	-	78	51.397	ENSSHAG00000014504	ZCCHC9	64	51.397	Sarcophilus_harrisii
ENSCSAVG00000010478	-	61	56.204	ENSSFOG00015011594	zcchc9	50	56.204	Scleropages_formosus
ENSCSAVG00000010478	-	51	53.913	ENSSDUG00000006368	zcchc9	50	54.815	Seriola_dumerili
ENSCSAVG00000010478	-	51	53.913	ENSSLDG00000022676	zcchc9	53	54.815	Seriola_lalandi_dorsalis
ENSCSAVG00000010478	-	83	48.404	ENSSARG00000008580	ZCCHC9	67	48.404	Sorex_araneus
ENSCSAVG00000010478	-	70	47.436	ENSSPAG00000022883	zcchc9	50	57.037	Stegastes_partitus
ENSCSAVG00000010478	-	78	52.874	ENSSSCG00000014129	ZCCHC9	57	60.000	Sus_scrofa
ENSCSAVG00000010478	-	68	48.366	ENSTGUG00000006994	ZCCHC9	98	47.753	Taeniopygia_guttata
ENSCSAVG00000010478	-	83	51.064	ENSTTRG00000013796	ZCCHC9	66	51.064	Tursiops_truncatus
ENSCSAVG00000010478	-	83	50.532	ENSUAMG00000021778	ZCCHC9	67	50.532	Ursus_americanus
ENSCSAVG00000010478	-	83	50.532	ENSUMAG00000003264	ZCCHC9	66	50.532	Ursus_maritimus
ENSCSAVG00000010478	-	83	50.000	ENSVPAG00000009423	ZCCHC9	66	50.000	Vicugna_pacos
ENSCSAVG00000010478	-	83	50.000	ENSVVUG00000023331	ZCCHC9	66	50.000	Vulpes_vulpes
ENSCSAVG00000010478	-	82	50.270	ENSXETG00000027804	zcchc9	70	50.270	Xenopus_tropicalis
ENSCSAVG00000010478	-	60	49.254	ENSXMAG00000024144	zcchc9	58	51.316	Xiphophorus_maculatus