EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010518 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6388 bases
Position: chrreftig_27:1651642-1658029
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017874	Myb_Cef	PF11831.8	1e-68	1	1
ENSCSAVP00000017875	Myb_Cef	PF11831.8	5.8e-67	1	1
ENSCSAVP00000017876	Myb_Cef	PF11831.8	3.4e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018067	-	975	-	ENSCSAVP00000017873	231 (aa)	-	H2ZJV7
ENSCSAVT00000018070	-	2246	-	ENSCSAVP00000017876	734 (aa)	-	H2ZJW0
ENSCSAVT00000018069	-	2444	-	ENSCSAVP00000017875	764 (aa)	-	H2ZJV9
ENSCSAVT00000018068	-	2457	-	ENSCSAVP00000017874	765 (aa)	-	H2ZJV8

Gene Model

Click here to download ENSCSAVG00000010518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010518	-	100	60.831	ENSG00000096401	CDC5L	99	61.683	Homo_sapiens
ENSCSAVG00000010518	-	99	61.395	ENSAPOG00000009828	cdc5l	98	62.112	Acanthochromis_polyacanthus
ENSCSAVG00000010518	-	100	61.104	ENSAMEG00000011685	CDC5L	99	61.952	Ailuropoda_melanoleuca
ENSCSAVG00000010518	-	99	60.424	ENSAOCG00000000762	cdc5l	98	61.893	Amphiprion_ocellaris
ENSCSAVG00000010518	-	99	60.424	ENSAPEG00000014728	cdc5l	98	61.893	Amphiprion_percula
ENSCSAVG00000010518	-	100	59.750	ENSATEG00000016760	cdc5l	98	61.021	Anabas_testudineus
ENSCSAVG00000010518	-	99	60.424	ENSAPLG00000015586	CDC5L	99	60.599	Anas_platyrhynchos
ENSCSAVG00000010518	-	100	61.548	ENSACAG00000012874	CDC5L	99	61.548	Anolis_carolinensis
ENSCSAVG00000010518	-	100	60.656	ENSANAG00000028499	CDC5L	99	61.587	Aotus_nancymaae
ENSCSAVG00000010518	-	100	58.417	ENSACLG00000027113	cdc5l	98	59.875	Astatotilapia_calliptera
ENSCSAVG00000010518	-	97	58.938	ENSAMXG00000000894	cdc5l	99	59.197	Astyanax_mexicanus
ENSCSAVG00000010518	-	100	60.831	ENSBTAG00000020012	CDC5L	99	61.683	Bos_taurus
ENSCSAVG00000010518	-	100	45.596	WBGene00008386	cdc-5L	97	45.466	Caenorhabditis_elegans
ENSCSAVG00000010518	-	100	60.831	ENSCJAG00000012210	CDC5L	99	61.761	Callithrix_jacchus
ENSCSAVG00000010518	-	100	61.181	ENSCAFG00000001996	CDC5L	99	62.030	Canis_familiaris
ENSCSAVG00000010518	-	100	61.181	ENSCAFG00020012353	CDC5L	99	62.030	Canis_lupus_dingo
ENSCSAVG00000010518	-	100	60.831	ENSCHIG00000022031	CDC5L	99	61.683	Capra_hircus
ENSCSAVG00000010518	-	100	61.181	ENSTSYG00000013155	CDC5L	99	62.030	Carlito_syrichta
ENSCSAVG00000010518	-	98	50.970	ENSCAPG00000016503	CDC5L	99	51.358	Cavia_aperea
ENSCSAVG00000010518	-	99	61.761	ENSCPOG00000000961	CDC5L	99	61.761	Cavia_porcellus
ENSCSAVG00000010518	-	100	60.831	ENSCCAG00000032324	CDC5L	99	61.761	Cebus_capucinus
ENSCSAVG00000010518	-	100	60.831	ENSCATG00000038925	CDC5L	99	61.683	Cercocebus_atys
ENSCSAVG00000010518	-	100	60.831	ENSCLAG00000014884	CDC5L	99	61.683	Chinchilla_lanigera
ENSCSAVG00000010518	-	100	60.831	ENSCSAG00000012464	CDC5L	99	61.683	Chlorocebus_sabaeus
ENSCSAVG00000010518	-	85	68.831	ENSCHOG00000001728	CDC5L	84	68.831	Choloepus_hoffmanni
ENSCSAVG00000010518	-	100	61.298	ENSCPBG00000016346	CDC5L	99	61.298	Chrysemys_picta_bellii
ENSCSAVG00000010518	-	99	84.319	ENSCING00000007995	-	99	84.319	Ciona_intestinalis
ENSCSAVG00000010518	-	100	60.831	ENSCANG00000032340	CDC5L	99	61.683	Colobus_angolensis_palliatus
ENSCSAVG00000010518	-	100	53.010	ENSCGRG00001007741	-	99	52.308	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010518	-	100	46.084	ENSCGRG00001021667	-	98	46.710	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010518	-	100	58.333	ENSCGRG00001019419	-	98	58.333	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010518	-	98	61.361	ENSCGRG00000006762	-	99	61.489	Cricetulus_griseus_crigri
ENSCSAVG00000010518	-	99	58.801	ENSCSEG00000017309	cdc5l	98	60.175	Cynoglossus_semilaevis
ENSCSAVG00000010518	-	82	92.466	ENSCVAG00000014810	cdc5l	88	92.466	Cyprinodon_variegatus
ENSCSAVG00000010518	-	100	61.481	ENSDARG00000043797	cdc5l	99	61.982	Danio_rerio
ENSCSAVG00000010518	-	100	58.949	ENSDNOG00000044224	CDC5L	97	59.925	Dasypus_novemcinctus
ENSCSAVG00000010518	-	100	61.055	ENSDORG00000009131	-	99	61.982	Dipodomys_ordii
ENSCSAVG00000010518	-	100	58.008	FBgn0265574	Cdc5	97	58.008	Drosophila_melanogaster
ENSCSAVG00000010518	-	89	68.381	ENSETEG00000013241	CDC5L	85	68.381	Echinops_telfairi
ENSCSAVG00000010518	-	80	53.704	ENSEBUG00000016336	cdc5l	98	53.858	Eptatretus_burgeri
ENSCSAVG00000010518	-	100	61.181	ENSEASG00005003742	CDC5L	99	62.030	Equus_asinus_asinus
ENSCSAVG00000010518	-	100	61.181	ENSECAG00000010081	CDC5L	99	62.030	Equus_caballus
ENSCSAVG00000010518	-	87	53.912	ENSEEUG00000007288	CDC5L	87	53.912	Erinaceus_europaeus
ENSCSAVG00000010518	-	100	59.925	ENSELUG00000013492	cdc5l	99	60.799	Esox_lucius
ENSCSAVG00000010518	-	100	61.181	ENSFCAG00000009570	CDC5L	99	62.030	Felis_catus
ENSCSAVG00000010518	-	100	61.548	ENSFALG00000012688	CDC5L	99	61.923	Ficedula_albicollis
ENSCSAVG00000010518	-	100	60.804	ENSFDAG00000018610	CDC5L	99	61.654	Fukomys_damarensis
ENSCSAVG00000010518	-	99	61.327	ENSFHEG00000013091	cdc5l	98	62.078	Fundulus_heteroclitus
ENSCSAVG00000010518	-	100	59.926	ENSGMOG00000000407	cdc5l	99	60.546	Gadus_morhua
ENSCSAVG00000010518	-	100	61.125	ENSGALG00000016704	CDC5L	89	61.500	Gallus_gallus
ENSCSAVG00000010518	-	68	67.614	ENSGAFG00000003610	cdc5l	93	69.011	Gambusia_affinis
ENSCSAVG00000010518	-	100	59.566	ENSGACG00000011733	cdc5l	98	60.560	Gasterosteus_aculeatus
ENSCSAVG00000010518	-	100	61.423	ENSGAGG00000005724	CDC5L	99	61.423	Gopherus_agassizii
ENSCSAVG00000010518	-	100	60.831	ENSGGOG00000006784	CDC5L	99	61.683	Gorilla_gorilla
ENSCSAVG00000010518	-	79	97.248	ENSHBUG00000017304	cdc5l	98	94.783	Haplochromis_burtoni
ENSCSAVG00000010518	-	99	61.761	ENSHGLG00000011993	CDC5L	99	61.761	Heterocephalus_glaber_female
ENSCSAVG00000010518	-	99	61.761	ENSHGLG00100005766	CDC5L	99	61.761	Heterocephalus_glaber_male
ENSCSAVG00000010518	-	100	58.794	ENSHCOG00000020596	cdc5l	98	59.799	Hippocampus_comes
ENSCSAVG00000010518	-	100	61.258	ENSIPUG00000004377	cdc5l	99	62.688	Ictalurus_punctatus
ENSCSAVG00000010518	-	99	62.359	ENSSTOG00000016173	CDC5L	99	62.359	Ictidomys_tridecemlineatus
ENSCSAVG00000010518	-	99	61.887	ENSJJAG00000012361	-	99	61.887	Jaculus_jaculus
ENSCSAVG00000010518	-	100	61.548	ENSKMAG00000007868	cdc5l	99	62.391	Kryptolebias_marmoratus
ENSCSAVG00000010518	-	100	59.051	ENSLBEG00000019437	cdc5l	98	60.149	Labrus_bergylta
ENSCSAVG00000010518	-	100	62.125	ENSLACG00000008060	CDC5L	99	62.968	Latimeria_chalumnae
ENSCSAVG00000010518	-	100	60.902	ENSLOCG00000015811	cdc5l	99	61.702	Lepisosteus_oculatus
ENSCSAVG00000010518	-	99	62.359	ENSLAFG00000012689	CDC5L	99	62.359	Loxodonta_africana
ENSCSAVG00000010518	-	100	60.831	ENSMFAG00000000812	CDC5L	99	61.683	Macaca_fascicularis
ENSCSAVG00000010518	-	100	60.831	ENSMMUG00000014389	CDC5L	98	72.062	Macaca_mulatta
ENSCSAVG00000010518	-	100	60.831	ENSMNEG00000036577	CDC5L	99	61.809	Macaca_nemestrina
ENSCSAVG00000010518	-	100	60.831	ENSMLEG00000030582	CDC5L	99	61.683	Mandrillus_leucophaeus
ENSCSAVG00000010518	-	100	60.000	ENSMAMG00000022399	cdc5l	98	61.298	Mastacembelus_armatus
ENSCSAVG00000010518	-	100	59.625	ENSMZEG00005027301	cdc5l	98	61.222	Maylandia_zebra
ENSCSAVG00000010518	-	100	60.897	ENSMGAG00000014263	CDC5L	99	61.270	Meleagris_gallopavo
ENSCSAVG00000010518	-	99	62.091	ENSMAUG00000013120	-	99	62.091	Mesocricetus_auratus
ENSCSAVG00000010518	-	100	60.427	ENSMICG00000006933	CDC5L	99	61.905	Microcebus_murinus
ENSCSAVG00000010518	-	99	62.233	ENSMOCG00000022910	-	99	62.233	Microtus_ochrogaster
ENSCSAVG00000010518	-	93	52.145	ENSMMOG00000006817	cdc5l	99	49.813	Mola_mola
ENSCSAVG00000010518	-	100	55.416	ENSMODG00000003702	-	99	56.352	Monodelphis_domestica
ENSCSAVG00000010518	-	100	60.902	ENSMODG00000018923	-	99	61.827	Monodelphis_domestica
ENSCSAVG00000010518	-	100	55.668	ENSMODG00000003716	-	99	56.604	Monodelphis_domestica
ENSCSAVG00000010518	-	100	59.500	ENSMALG00000021999	cdc5l	98	60.549	Monopterus_albus
ENSCSAVG00000010518	-	99	61.761	MGP_CAROLIEiJ_G0021641	-	99	61.761	Mus_caroli
ENSCSAVG00000010518	-	99	60.881	ENSMUSG00000112781	Gm9046	99	60.881	Mus_musculus
ENSCSAVG00000010518	-	99	61.132	ENSMUSG00000112814	Gm9040	99	61.132	Mus_musculus
ENSCSAVG00000010518	-	99	61.006	ENSMUSG00000112216	Gm32717	99	61.006	Mus_musculus
ENSCSAVG00000010518	-	99	61.132	ENSMUSG00000112419	Gm9044	99	61.132	Mus_musculus
ENSCSAVG00000010518	-	99	61.258	ENSMUSG00000112027	Gm9045	99	61.258	Mus_musculus
ENSCSAVG00000010518	-	99	61.006	ENSMUSG00000112495	Gm9048	99	61.006	Mus_musculus
ENSCSAVG00000010518	-	99	61.006	ENSMUSG00000112252	Gm32802	99	61.006	Mus_musculus
ENSCSAVG00000010518	-	99	61.258	ENSMUSG00000112919	Gm9049	99	61.258	Mus_musculus
ENSCSAVG00000010518	-	99	61.887	ENSMUSG00000023932	Cdc5l	99	61.887	Mus_musculus
ENSCSAVG00000010518	-	99	61.887	MGP_PahariEiJ_G0020633	-	99	61.887	Mus_pahari
ENSCSAVG00000010518	-	99	61.887	MGP_SPRETEiJ_G0022553	-	99	61.887	Mus_spretus
ENSCSAVG00000010518	-	100	61.181	ENSMPUG00000012546	CDC5L	99	62.030	Mustela_putorius_furo
ENSCSAVG00000010518	-	100	60.853	ENSMLUG00000012803	CDC5L	99	61.779	Myotis_lucifugus
ENSCSAVG00000010518	-	99	61.635	ENSNGAG00000015764	-	99	61.635	Nannospalax_galili
ENSCSAVG00000010518	-	90	91.781	ENSNBRG00000009082	cdc5l	94	91.781	Neolamprologus_brichardi
ENSCSAVG00000010518	-	87	62.963	ENSNLEG00000003627	CDC5L	95	62.963	Nomascus_leucogenys
ENSCSAVG00000010518	-	72	86.986	ENSMEUG00000012298	-	69	86.986	Notamacropus_eugenii
ENSCSAVG00000010518	-	88	54.225	ENSMEUG00000015564	-	100	55.207	Notamacropus_eugenii
ENSCSAVG00000010518	-	81	59.662	ENSOPRG00000007745	CDC5L	80	59.662	Ochotona_princeps
ENSCSAVG00000010518	-	99	62.013	ENSODEG00000017235	CDC5L	99	62.013	Octodon_degus
ENSCSAVG00000010518	-	99	60.674	ENSONIG00000001420	cdc5l	98	61.395	Oreochromis_niloticus
ENSCSAVG00000010518	-	100	61.548	ENSOANG00000008262	CDC5L	99	61.548	Ornithorhynchus_anatinus
ENSCSAVG00000010518	-	100	60.930	ENSOCUG00000017240	CDC5L	99	61.779	Oryctolagus_cuniculus
ENSCSAVG00000010518	-	100	59.500	ENSORLG00000018576	cdc5l	98	60.924	Oryzias_latipes
ENSCSAVG00000010518	-	100	60.549	ENSOMEG00000015638	cdc5l	98	62.047	Oryzias_melastigma
ENSCSAVG00000010518	-	100	61.132	ENSOGAG00000008211	CDC5L	99	61.982	Otolemur_garnettii
ENSCSAVG00000010518	-	100	60.831	ENSOARG00000010205	CDC5L	99	61.683	Ovis_aries
ENSCSAVG00000010518	-	100	60.930	ENSPPAG00000031456	CDC5L	99	61.779	Pan_paniscus
ENSCSAVG00000010518	-	100	61.181	ENSPPRG00000014475	CDC5L	99	62.030	Panthera_pardus
ENSCSAVG00000010518	-	100	61.055	ENSPTIG00000006547	CDC5L	99	61.905	Panthera_tigris_altaica
ENSCSAVG00000010518	-	100	60.930	ENSPTRG00000018224	CDC5L	99	61.779	Pan_troglodytes
ENSCSAVG00000010518	-	100	60.831	ENSPANG00000018654	CDC5L	99	61.683	Papio_anubis
ENSCSAVG00000010518	-	100	61.181	ENSPKIG00000015398	cdc5l	99	62.155	Paramormyrops_kingsleyae
ENSCSAVG00000010518	-	100	61.423	ENSPSIG00000013123	CDC5L	99	61.423	Pelodiscus_sinensis
ENSCSAVG00000010518	-	100	52.224	ENSPEMG00000007860	-	99	52.971	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010518	-	100	59.356	ENSPMAG00000005250	cdc5l	99	61.015	Petromyzon_marinus
ENSCSAVG00000010518	-	99	61.827	ENSPCIG00000024040	-	99	61.827	Phascolarctos_cinereus
ENSCSAVG00000010518	-	99	61.278	ENSPFOG00000013630	cdc5l	98	61.905	Poecilia_formosa
ENSCSAVG00000010518	-	99	61.153	ENSPLAG00000001970	cdc5l	98	61.905	Poecilia_latipinna
ENSCSAVG00000010518	-	99	61.153	ENSPMEG00000001452	cdc5l	98	61.905	Poecilia_mexicana
ENSCSAVG00000010518	-	99	61.404	ENSPREG00000004453	cdc5l	98	62.155	Poecilia_reticulata
ENSCSAVG00000010518	-	100	60.908	ENSPPYG00000016661	CDC5L	99	61.839	Pongo_abelii
ENSCSAVG00000010518	-	87	54.131	ENSPCAG00000011444	CDC5L	100	54.131	Procavia_capensis
ENSCSAVG00000010518	-	100	53.506	ENSPCOG00000024619	CDC5L	99	52.267	Propithecus_coquereli
ENSCSAVG00000010518	-	100	61.181	ENSPVAG00000004579	CDC5L	99	62.108	Pteropus_vampyrus
ENSCSAVG00000010518	-	99	61.181	ENSPNAG00000006467	cdc5l	99	61.683	Pygocentrus_nattereri
ENSCSAVG00000010518	-	99	61.887	ENSRNOG00000019975	Cdc5l	99	61.887	Rattus_norvegicus
ENSCSAVG00000010518	-	100	56.478	ENSRBIG00000037455	CDC5L	99	57.303	Rhinopithecus_bieti
ENSCSAVG00000010518	-	100	60.831	ENSRROG00000029176	CDC5L	99	61.683	Rhinopithecus_roxellana
ENSCSAVG00000010518	-	100	60.831	ENSSBOG00000031265	CDC5L	99	61.761	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010518	-	100	60.625	ENSSHAG00000017642	-	99	61.548	Sarcophilus_harrisii
ENSCSAVG00000010518	-	99	61.028	ENSSFOG00015015844	cdc5l	99	62.281	Scleropages_formosus
ENSCSAVG00000010518	-	100	59.176	ENSSMAG00000001917	cdc5l	98	60.599	Scophthalmus_maximus
ENSCSAVG00000010518	-	99	61.146	ENSSDUG00000014563	cdc5l	98	61.768	Seriola_dumerili
ENSCSAVG00000010518	-	99	61.146	ENSSLDG00000017777	cdc5l	98	61.768	Seriola_lalandi_dorsalis
ENSCSAVG00000010518	-	85	62.920	ENSSARG00000012371	CDC5L	87	62.682	Sorex_araneus
ENSCSAVG00000010518	-	100	61.125	ENSSPUG00000006685	CDC5L	99	61.500	Sphenodon_punctatus
ENSCSAVG00000010518	-	100	58.824	ENSSPAG00000023162	cdc5l	98	61.347	Stegastes_partitus
ENSCSAVG00000010518	-	99	62.108	ENSSSCG00000001708	CDC5L	99	62.108	Sus_scrofa
ENSCSAVG00000010518	-	100	60.870	ENSTGUG00000013251	CDC5L	99	61.242	Taeniopygia_guttata
ENSCSAVG00000010518	-	100	59.677	ENSTRUG00000006648	cdc5l	98	60.821	Takifugu_rubripes
ENSCSAVG00000010518	-	100	59.148	ENSTNIG00000009853	cdc5l	99	60.276	Tetraodon_nigroviridis
ENSCSAVG00000010518	-	60	72.088	ENSTBEG00000017422	CDC5L	57	72.308	Tupaia_belangeri
ENSCSAVG00000010518	-	100	60.755	ENSTTRG00000006940	CDC5L	99	61.558	Tursiops_truncatus
ENSCSAVG00000010518	-	66	50.741	ENSUAMG00000028303	CDC5L	98	50.741	Ursus_americanus
ENSCSAVG00000010518	-	100	61.181	ENSUMAG00000005223	CDC5L	99	62.030	Ursus_maritimus
ENSCSAVG00000010518	-	98	61.381	ENSVPAG00000008981	CDC5L	99	61.175	Vicugna_pacos
ENSCSAVG00000010518	-	100	61.181	ENSVVUG00000029242	CDC5L	99	62.030	Vulpes_vulpes
ENSCSAVG00000010518	-	100	58.186	ENSXETG00000007885	cdc5l	99	58.209	Xenopus_tropicalis
ENSCSAVG00000010518	-	99	61.404	ENSXCOG00000014117	cdc5l	98	62.155	Xiphophorus_couchianus
ENSCSAVG00000010518	-	99	61.404	ENSXMAG00000006816	cdc5l	98	62.155	Xiphophorus_maculatus