EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010546 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 3394 bases
Position: chrreftig_14:948411-951804
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000017920	PRP4	PF08799.11	4.6e-12	1	1
ENSCSAVP00000017920	Prp18	PF02840.15	1.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018114	-	1341	-	ENSCSAVP00000017920	342 (aa)	-	H2ZK04

Gene Model

Click here to download ENSCSAVG00000010546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010546	-	99	54.360	ENSG00000165630	PRPF18	99	54.335	Homo_sapiens
ENSCSAVG00000010546	-	99	55.685	ENSAPOG00000024177	prpf18	99	55.977	Acanthochromis_polyacanthus
ENSCSAVG00000010546	-	99	54.360	ENSAMEG00000013591	-	99	54.335	Ailuropoda_melanoleuca
ENSCSAVG00000010546	-	99	55.425	ENSACIG00000001186	prpf18	99	56.395	Amphilophus_citrinellus
ENSCSAVG00000010546	-	97	55.490	ENSAOCG00000006572	prpf18	96	53.409	Amphiprion_ocellaris
ENSCSAVG00000010546	-	99	55.685	ENSAPEG00000004564	prpf18	99	55.977	Amphiprion_percula
ENSCSAVG00000010546	-	99	55.685	ENSATEG00000000303	prpf18	99	56.105	Anabas_testudineus
ENSCSAVG00000010546	-	99	53.644	ENSAPLG00000003387	-	99	53.779	Anas_platyrhynchos
ENSCSAVG00000010546	-	99	54.942	ENSACAG00000000818	-	99	55.362	Anolis_carolinensis
ENSCSAVG00000010546	-	99	54.179	ENSANAG00000037445	-	99	54.335	Aotus_nancymaae
ENSCSAVG00000010546	-	99	55.394	ENSACLG00000026296	prpf18	99	56.105	Astatotilapia_calliptera
ENSCSAVG00000010546	-	99	55.172	ENSAMXG00000012848	prpf18	99	55.620	Astyanax_mexicanus
ENSCSAVG00000010546	-	99	54.360	ENSBTAG00000017244	PRPF18	99	54.335	Bos_taurus
ENSCSAVG00000010546	-	98	38.109	WBGene00009320	F32B6.3	97	38.109	Caenorhabditis_elegans
ENSCSAVG00000010546	-	99	54.179	ENSCJAG00000009432	-	99	54.335	Callithrix_jacchus
ENSCSAVG00000010546	-	99	54.360	ENSCAFG00000004735	-	99	54.335	Canis_familiaris
ENSCSAVG00000010546	-	99	54.360	ENSCAFG00020007712	-	99	54.335	Canis_lupus_dingo
ENSCSAVG00000010546	-	99	54.360	ENSCHIG00000000499	-	99	54.335	Capra_hircus
ENSCSAVG00000010546	-	99	54.360	ENSTSYG00000003517	-	99	54.651	Carlito_syrichta
ENSCSAVG00000010546	-	99	54.360	ENSCPOG00000021069	-	99	54.335	Cavia_porcellus
ENSCSAVG00000010546	-	99	54.179	ENSCCAG00000036822	-	99	54.335	Cebus_capucinus
ENSCSAVG00000010546	-	99	46.221	ENSCATG00000016633	-	99	46.243	Cercocebus_atys
ENSCSAVG00000010546	-	99	54.070	ENSCLAG00000011770	-	99	54.360	Chinchilla_lanigera
ENSCSAVG00000010546	-	99	52.422	ENSCSAG00000013109	-	99	52.991	Chlorocebus_sabaeus
ENSCSAVG00000010546	-	99	52.500	ENSCPBG00000003100	-	99	53.482	Chrysemys_picta_bellii
ENSCSAVG00000010546	-	99	85.423	ENSCING00000020481	-	99	85.423	Ciona_intestinalis
ENSCSAVG00000010546	-	99	54.360	ENSCANG00000034900	-	99	54.335	Colobus_angolensis_palliatus
ENSCSAVG00000010546	-	99	54.467	ENSCGRG00001023665	Prpf18	99	54.624	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010546	-	99	54.467	ENSCGRG00000014690	Prpf18	99	54.624	Cricetulus_griseus_crigri
ENSCSAVG00000010546	-	99	55.425	ENSCSEG00000005536	prpf18	99	55.425	Cynoglossus_semilaevis
ENSCSAVG00000010546	-	99	55.325	ENSCVAG00000012401	prpf18	99	55.325	Cyprinodon_variegatus
ENSCSAVG00000010546	-	99	54.810	ENSDARG00000058306	prpf18	99	55.263	Danio_rerio
ENSCSAVG00000010546	-	99	54.360	ENSDNOG00000035607	-	99	54.335	Dasypus_novemcinctus
ENSCSAVG00000010546	-	99	54.070	ENSDORG00000000858	Prpf18	99	54.046	Dipodomys_ordii
ENSCSAVG00000010546	-	99	47.647	FBgn0027784	Prp18	99	47.647	Drosophila_melanogaster
ENSCSAVG00000010546	-	77	55.263	ENSETEG00000015060	-	99	47.368	Echinops_telfairi
ENSCSAVG00000010546	-	98	53.276	ENSEBUG00000016502	prpf18	98	53.276	Eptatretus_burgeri
ENSCSAVG00000010546	-	99	54.651	ENSEASG00005019373	-	99	54.624	Equus_asinus_asinus
ENSCSAVG00000010546	-	99	54.651	ENSECAG00000006997	PRPF18	99	54.624	Equus_caballus
ENSCSAVG00000010546	-	73	86.538	ENSEEUG00000001171	-	79	86.538	Erinaceus_europaeus
ENSCSAVG00000010546	-	99	56.232	ENSELUG00000022190	prpf18	99	56.232	Esox_lucius
ENSCSAVG00000010546	-	99	54.179	ENSFCAG00000004436	-	99	54.335	Felis_catus
ENSCSAVG00000010546	-	91	51.829	ENSFALG00000001912	-	97	52.941	Ficedula_albicollis
ENSCSAVG00000010546	-	91	38.050	ENSFDAG00000010713	-	85	38.000	Fukomys_damarensis
ENSCSAVG00000010546	-	92	55.590	ENSFDAG00000014026	-	99	55.556	Fukomys_damarensis
ENSCSAVG00000010546	-	79	58.824	ENSFHEG00000020125	prpf18	99	58.824	Fundulus_heteroclitus
ENSCSAVG00000010546	-	99	56.725	ENSGMOG00000012210	prpf18	99	56.725	Gadus_morhua
ENSCSAVG00000010546	-	99	54.839	ENSGALG00000043593	-	99	54.971	Gallus_gallus
ENSCSAVG00000010546	-	99	54.734	ENSGAFG00000006034	prpf18	99	55.718	Gambusia_affinis
ENSCSAVG00000010546	-	99	54.942	ENSGACG00000012232	prpf18	99	54.942	Gasterosteus_aculeatus
ENSCSAVG00000010546	-	99	54.913	ENSGAGG00000016878	-	99	55.331	Gopherus_agassizii
ENSCSAVG00000010546	-	91	52.665	ENSGGOG00000025188	-	96	52.648	Gorilla_gorilla
ENSCSAVG00000010546	-	99	55.394	ENSHBUG00000010264	prpf18	99	56.105	Haplochromis_burtoni
ENSCSAVG00000010546	-	99	54.070	ENSHGLG00000018534	PRPF18	99	54.046	Heterocephalus_glaber_female
ENSCSAVG00000010546	-	92	55.590	ENSHGLG00100012161	-	97	55.556	Heterocephalus_glaber_male
ENSCSAVG00000010546	-	99	55.718	ENSHCOG00000015987	prpf18	99	56.686	Hippocampus_comes
ENSCSAVG00000010546	-	98	53.824	ENSIPUG00000007432	prpf18	99	53.868	Ictalurus_punctatus
ENSCSAVG00000010546	-	99	53.779	ENSSTOG00000008735	-	99	53.757	Ictidomys_tridecemlineatus
ENSCSAVG00000010546	-	99	37.427	ENSJJAG00000015191	-	99	37.283	Jaculus_jaculus
ENSCSAVG00000010546	-	99	54.360	ENSJJAG00000024041	-	99	54.335	Jaculus_jaculus
ENSCSAVG00000010546	-	99	55.718	ENSKMAG00000012124	prpf18	99	56.012	Kryptolebias_marmoratus
ENSCSAVG00000010546	-	96	54.303	ENSLBEG00000028466	prpf18	97	54.599	Labrus_bergylta
ENSCSAVG00000010546	-	99	55.718	ENSLACG00000009885	prpf18	99	56.012	Latimeria_chalumnae
ENSCSAVG00000010546	-	99	55.652	ENSLOCG00000016736	prpf18	99	55.942	Lepisosteus_oculatus
ENSCSAVG00000010546	-	99	54.360	ENSLAFG00000007753	-	99	54.335	Loxodonta_africana
ENSCSAVG00000010546	-	99	54.360	ENSMFAG00000000540	-	99	54.335	Macaca_fascicularis
ENSCSAVG00000010546	-	99	54.360	ENSMMUG00000015071	PRPF18	96	61.635	Macaca_mulatta
ENSCSAVG00000010546	-	99	54.360	ENSMNEG00000024679	-	99	54.335	Macaca_nemestrina
ENSCSAVG00000010546	-	99	41.279	ENSMLEG00000031715	-	99	41.329	Mandrillus_leucophaeus
ENSCSAVG00000010546	-	99	55.102	ENSMAMG00000006610	prpf18	99	55.394	Mastacembelus_armatus
ENSCSAVG00000010546	-	99	55.394	ENSMZEG00005019392	prpf18	99	56.105	Maylandia_zebra
ENSCSAVG00000010546	-	99	54.839	ENSMGAG00000005023	-	99	54.971	Meleagris_gallopavo
ENSCSAVG00000010546	-	99	54.651	ENSMICG00000006572	-	99	54.624	Microcebus_murinus
ENSCSAVG00000010546	-	99	54.360	ENSMOCG00000021468	Prpf18	99	54.335	Microtus_ochrogaster
ENSCSAVG00000010546	-	99	55.977	ENSMMOG00000013012	prpf18	99	56.268	Mola_mola
ENSCSAVG00000010546	-	98	52.754	ENSMODG00000024043	-	99	52.754	Monodelphis_domestica
ENSCSAVG00000010546	-	91	51.227	ENSMODG00000016902	-	90	52.147	Monodelphis_domestica
ENSCSAVG00000010546	-	99	50.986	ENSMALG00000005486	prpf18	99	52.890	Monopterus_albus
ENSCSAVG00000010546	-	99	54.179	MGP_CAROLIEiJ_G0023143	Prpf18	100	64.474	Mus_caroli
ENSCSAVG00000010546	-	99	54.467	ENSMUSG00000039449	Prpf18	100	64.474	Mus_musculus
ENSCSAVG00000010546	-	99	54.360	MGP_PahariEiJ_G0019203	Prpf18	100	64.474	Mus_pahari
ENSCSAVG00000010546	-	99	54.467	MGP_SPRETEiJ_G0024061	Prpf18	100	64.474	Mus_spretus
ENSCSAVG00000010546	-	99	54.070	ENSMPUG00000000938	-	99	54.046	Mustela_putorius_furo
ENSCSAVG00000010546	-	99	54.467	ENSMLUG00000009200	-	99	54.624	Myotis_lucifugus
ENSCSAVG00000010546	-	99	53.779	ENSNGAG00000012500	-	99	54.335	Nannospalax_galili
ENSCSAVG00000010546	-	67	51.282	ENSNGAG00000023550	-	83	51.709	Nannospalax_galili
ENSCSAVG00000010546	-	99	55.394	ENSNBRG00000001778	prpf18	99	56.105	Neolamprologus_brichardi
ENSCSAVG00000010546	-	99	54.360	ENSNLEG00000012186	-	99	54.335	Nomascus_leucogenys
ENSCSAVG00000010546	-	75	48.062	ENSMEUG00000005032	-	75	48.062	Notamacropus_eugenii
ENSCSAVG00000010546	-	76	34.701	ENSOPRG00000002153	-	99	34.686	Ochotona_princeps
ENSCSAVG00000010546	-	99	54.070	ENSODEG00000003770	-	99	54.360	Octodon_degus
ENSCSAVG00000010546	-	97	54.896	ENSONIG00000014854	prpf18	95	55.621	Oreochromis_niloticus
ENSCSAVG00000010546	-	99	53.198	ENSOANG00000015404	-	99	53.333	Ornithorhynchus_anatinus
ENSCSAVG00000010546	-	99	54.070	ENSOCUG00000027756	-	93	55.556	Oryctolagus_cuniculus
ENSCSAVG00000010546	-	99	53.143	ENSORLG00000010293	prpf18	99	53.143	Oryzias_latipes
ENSCSAVG00000010546	-	99	53.959	ENSORLG00020001530	prpf18	99	54.360	Oryzias_latipes_hni
ENSCSAVG00000010546	-	99	53.666	ENSORLG00015013705	prpf18	99	54.070	Oryzias_latipes_hsok
ENSCSAVG00000010546	-	99	54.839	ENSOMEG00000009167	prpf18	99	55.523	Oryzias_melastigma
ENSCSAVG00000010546	-	99	53.198	ENSOGAG00000007294	-	99	53.179	Otolemur_garnettii
ENSCSAVG00000010546	-	99	52.422	ENSOARG00000006243	-	99	53.276	Ovis_aries
ENSCSAVG00000010546	-	99	54.360	ENSPPAG00000041959	-	99	54.335	Pan_paniscus
ENSCSAVG00000010546	-	99	54.179	ENSPPRG00000000107	-	99	54.335	Panthera_pardus
ENSCSAVG00000010546	-	99	54.179	ENSPTIG00000021094	-	99	54.335	Panthera_tigris_altaica
ENSCSAVG00000010546	-	99	54.360	ENSPTRG00000002306	PRPF18	99	54.335	Pan_troglodytes
ENSCSAVG00000010546	-	99	54.360	ENSPANG00000023346	-	99	54.335	Papio_anubis
ENSCSAVG00000010546	-	91	84.906	ENSPKIG00000014128	prpf18	75	84.906	Paramormyrops_kingsleyae
ENSCSAVG00000010546	-	99	55.780	ENSPSIG00000016064	-	99	55.942	Pelodiscus_sinensis
ENSCSAVG00000010546	-	99	53.216	ENSPMGG00000016486	prpf18	99	53.079	Periophthalmus_magnuspinnatus
ENSCSAVG00000010546	-	99	54.179	ENSPEMG00000013704	Prpf18	99	54.335	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010546	-	99	57.143	ENSPMAG00000000204	prpf18	99	57.143	Petromyzon_marinus
ENSCSAVG00000010546	-	91	52.484	ENSPCIG00000012963	-	98	52.648	Phascolarctos_cinereus
ENSCSAVG00000010546	-	99	54.310	ENSPFOG00000017611	prpf18	99	54.885	Poecilia_formosa
ENSCSAVG00000010546	-	99	55.325	ENSPLAG00000000369	prpf18	99	56.012	Poecilia_latipinna
ENSCSAVG00000010546	-	99	55.294	ENSPMEG00000005183	prpf18	99	56.012	Poecilia_mexicana
ENSCSAVG00000010546	-	99	55.325	ENSPREG00000015232	prpf18	99	55.325	Poecilia_reticulata
ENSCSAVG00000010546	-	99	54.070	ENSPPYG00000002101	PRPF18	99	54.203	Pongo_abelii
ENSCSAVG00000010546	-	99	41.570	ENSPCAG00000010833	-	99	41.860	Procavia_capensis
ENSCSAVG00000010546	-	99	52.199	ENSPCOG00000013057	-	99	51.613	Propithecus_coquereli
ENSCSAVG00000010546	-	99	31.395	ENSPVAG00000002947	-	99	30.612	Pteropus_vampyrus
ENSCSAVG00000010546	-	99	55.685	ENSPNYG00000003554	prpf18	99	56.395	Pundamilia_nyererei
ENSCSAVG00000010546	-	99	53.448	ENSPNAG00000023151	prpf18	99	54.023	Pygocentrus_nattereri
ENSCSAVG00000010546	-	99	54.179	ENSRNOG00000018396	Prpf18	99	54.335	Rattus_norvegicus
ENSCSAVG00000010546	-	99	54.651	ENSRBIG00000028028	-	99	54.624	Rhinopithecus_bieti
ENSCSAVG00000010546	-	99	54.360	ENSRROG00000040695	-	99	54.335	Rhinopithecus_roxellana
ENSCSAVG00000010546	-	99	54.179	ENSSBOG00000034482	-	99	54.335	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010546	-	99	53.890	ENSSHAG00000016463	-	99	54.046	Sarcophilus_harrisii
ENSCSAVG00000010546	-	98	52.507	ENSSHAG00000009669	-	99	52.212	Sarcophilus_harrisii
ENSCSAVG00000010546	-	68	33.190	ENSSFOG00015021154	-	89	33.621	Scleropages_formosus
ENSCSAVG00000010546	-	97	55.848	ENSSFOG00015022118	prpf18	99	53.026	Scleropages_formosus
ENSCSAVG00000010546	-	99	54.493	ENSSMAG00000005308	prpf18	99	54.493	Scophthalmus_maximus
ENSCSAVG00000010546	-	99	55.685	ENSSDUG00000015428	prpf18	99	56.395	Seriola_dumerili
ENSCSAVG00000010546	-	99	55.394	ENSSLDG00000023989	prpf18	99	56.105	Seriola_lalandi_dorsalis
ENSCSAVG00000010546	-	99	35.484	ENSSARG00000005307	-	99	35.777	Sorex_araneus
ENSCSAVG00000010546	-	99	55.523	ENSSPUG00000002619	-	99	55.814	Sphenodon_punctatus
ENSCSAVG00000010546	-	99	55.102	ENSSPAG00000019502	prpf18	99	55.394	Stegastes_partitus
ENSCSAVG00000010546	-	99	54.360	ENSSSCG00000026354	-	99	54.335	Sus_scrofa
ENSCSAVG00000010546	-	99	55.132	ENSTGUG00000002286	-	99	54.942	Taeniopygia_guttata
ENSCSAVG00000010546	-	99	55.030	ENSTRUG00000011278	prpf18	99	56.012	Takifugu_rubripes
ENSCSAVG00000010546	-	99	54.734	ENSTNIG00000000911	prpf18	99	55.718	Tetraodon_nigroviridis
ENSCSAVG00000010546	-	57	83.117	ENSTBEG00000013011	-	59	83.117	Tupaia_belangeri
ENSCSAVG00000010546	-	99	54.651	ENSTTRG00000011117	PRPF18	99	54.942	Tursiops_truncatus
ENSCSAVG00000010546	-	90	55.238	ENSUAMG00000001815	-	81	59.636	Ursus_americanus
ENSCSAVG00000010546	-	99	52.616	ENSUMAG00000012329	-	99	52.601	Ursus_maritimus
ENSCSAVG00000010546	-	99	50.437	ENSVPAG00000011486	-	99	50.435	Vicugna_pacos
ENSCSAVG00000010546	-	99	54.360	ENSVVUG00000005453	-	99	54.335	Vulpes_vulpes
ENSCSAVG00000010546	-	99	53.026	ENSXETG00000024057	prpf18	99	53.026	Xenopus_tropicalis
ENSCSAVG00000010546	-	99	54.545	ENSXCOG00000020414	prpf18	99	54.971	Xiphophorus_couchianus
ENSCSAVG00000010546	-	99	54.412	ENSXMAG00000004713	prpf18	90	54.438	Xiphophorus_maculatus