EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010619 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 7324 bases
Position: chrreftig_254:214967-222290
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018036	RRM_1	PF00076.22	2.5e-16	1	1
ENSCSAVP00000018035	RRM_1	PF00076.22	3.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018232	-	1747	-	ENSCSAVP00000018035	535 (aa)	-	H2ZKB9
ENSCSAVT00000018233	-	1245	-	ENSCSAVP00000018036	415 (aa)	-	H2ZKC0

Gene Model

Click here to download ENSCSAVG00000010619's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010619's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010619	-	72	65.538	ENSG00000131013	PPIL4	66	70.821	Homo_sapiens
ENSCSAVG00000010619	-	72	68.224	ENSAPOG00000005904	ppil4	99	56.780	Acanthochromis_polyacanthus
ENSCSAVG00000010619	-	73	64.438	ENSAMEG00000018278	PPIL4	66	70.213	Ailuropoda_melanoleuca
ENSCSAVG00000010619	-	72	67.601	ENSACIG00000006837	ppil4	92	57.869	Amphilophus_citrinellus
ENSCSAVG00000010619	-	72	68.224	ENSAOCG00000014541	ppil4	94	62.069	Amphiprion_ocellaris
ENSCSAVG00000010619	-	72	68.224	ENSAPEG00000004245	ppil4	99	56.809	Amphiprion_percula
ENSCSAVG00000010619	-	72	67.081	ENSATEG00000013141	ppil4	97	71.429	Anabas_testudineus
ENSCSAVG00000010619	-	67	64.474	ENSAPLG00000008437	PPIL4	65	70.395	Anas_platyrhynchos
ENSCSAVG00000010619	-	72	65.944	ENSACAG00000006936	PPIL4	93	55.675	Anolis_carolinensis
ENSCSAVG00000010619	-	72	65.538	ENSANAG00000006499	PPIL4	66	70.821	Aotus_nancymaae
ENSCSAVG00000010619	-	72	67.391	ENSACLG00000018467	ppil4	99	56.276	Astatotilapia_calliptera
ENSCSAVG00000010619	-	72	66.978	ENSAMXG00000014167	ppil4	95	71.379	Astyanax_mexicanus
ENSCSAVG00000010619	-	72	65.538	ENSBTAG00000016980	PPIL4	66	70.517	Bos_taurus
ENSCSAVG00000010619	-	81	48.107	WBGene00000890	sig-7	96	50.000	Caenorhabditis_elegans
ENSCSAVG00000010619	-	72	65.538	ENSCJAG00000019613	PPIL4	66	70.821	Callithrix_jacchus
ENSCSAVG00000010619	-	72	65.231	ENSCAFG00000000379	PPIL4	62	70.462	Canis_familiaris
ENSCSAVG00000010619	-	72	65.231	ENSCAFG00020013550	PPIL4	97	58.081	Canis_lupus_dingo
ENSCSAVG00000010619	-	72	65.732	ENSCHIG00000010600	PPIL4	63	70.769	Capra_hircus
ENSCSAVG00000010619	-	72	65.231	ENSTSYG00000009860	PPIL4	66	70.213	Carlito_syrichta
ENSCSAVG00000010619	-	52	75.610	ENSCAPG00000004550	PPIL4	57	75.610	Cavia_aperea
ENSCSAVG00000010619	-	72	65.538	ENSCPOG00000032871	PPIL4	66	70.517	Cavia_porcellus
ENSCSAVG00000010619	-	72	65.538	ENSCCAG00000022598	PPIL4	66	70.821	Cebus_capucinus
ENSCSAVG00000010619	-	72	65.538	ENSCATG00000039936	PPIL4	66	70.821	Cercocebus_atys
ENSCSAVG00000010619	-	72	65.538	ENSCLAG00000003991	PPIL4	66	70.517	Chinchilla_lanigera
ENSCSAVG00000010619	-	72	65.538	ENSCSAG00000017219	PPIL4	66	70.821	Chlorocebus_sabaeus
ENSCSAVG00000010619	-	73	64.832	ENSCPBG00000016612	PPIL4	91	56.954	Chrysemys_picta_bellii
ENSCSAVG00000010619	-	99	67.735	ENSCING00000006773	-	99	77.802	Ciona_intestinalis
ENSCSAVG00000010619	-	72	65.231	ENSCGRG00001019623	Ppil4	66	70.517	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010619	-	72	65.231	ENSCGRG00000003980	Ppil4	66	70.517	Cricetulus_griseus_crigri
ENSCSAVG00000010619	-	100	51.322	ENSCSEG00000015812	ppil4	98	54.624	Cynoglossus_semilaevis
ENSCSAVG00000010619	-	72	66.044	ENSCVAG00000001078	ppil4	99	57.203	Cyprinodon_variegatus
ENSCSAVG00000010619	-	99	53.201	ENSDARG00000043854	ppil4	100	57.112	Danio_rerio
ENSCSAVG00000010619	-	72	65.538	ENSDNOG00000040219	PPIL4	66	70.517	Dasypus_novemcinctus
ENSCSAVG00000010619	-	72	65.538	ENSDORG00000007186	Ppil4	66	70.821	Dipodomys_ordii
ENSCSAVG00000010619	-	99	47.748	FBgn0027617	CG5808	68	49.670	Drosophila_melanogaster
ENSCSAVG00000010619	-	72	65.231	ENSEASG00005008935	PPIL4	66	70.213	Equus_asinus_asinus
ENSCSAVG00000010619	-	72	65.231	ENSECAG00000021819	PPIL4	66	70.213	Equus_caballus
ENSCSAVG00000010619	-	72	61.846	ENSEEUG00000000959	PPIL4	66	66.869	Erinaceus_europaeus
ENSCSAVG00000010619	-	72	63.190	ENSELUG00000018746	ppil4	70	68.182	Esox_lucius
ENSCSAVG00000010619	-	72	65.231	ENSFCAG00000046720	PPIL4	66	70.213	Felis_catus
ENSCSAVG00000010619	-	61	69.380	ENSFALG00000013130	PPIL4	63	70.000	Ficedula_albicollis
ENSCSAVG00000010619	-	72	65.231	ENSFDAG00000008146	PPIL4	66	70.517	Fukomys_damarensis
ENSCSAVG00000010619	-	72	65.732	ENSFHEG00000011503	ppil4	99	56.317	Fundulus_heteroclitus
ENSCSAVG00000010619	-	71	63.125	ENSGMOG00000006191	ppil4	80	67.781	Gadus_morhua
ENSCSAVG00000010619	-	73	65.443	ENSGALG00000012364	PPIL4	64	71.254	Gallus_gallus
ENSCSAVG00000010619	-	72	66.044	ENSGAFG00000009521	ppil4	91	62.690	Gambusia_affinis
ENSCSAVG00000010619	-	73	65.538	ENSGACG00000006639	ppil4	99	55.054	Gasterosteus_aculeatus
ENSCSAVG00000010619	-	92	52.063	ENSGAGG00000005926	PPIL4	91	56.071	Gopherus_agassizii
ENSCSAVG00000010619	-	72	65.538	ENSGGOG00000009686	PPIL4	66	70.821	Gorilla_gorilla
ENSCSAVG00000010619	-	72	67.391	ENSHBUG00000021518	ppil4	99	56.276	Haplochromis_burtoni
ENSCSAVG00000010619	-	72	65.538	ENSHGLG00000007609	PPIL4	66	70.821	Heterocephalus_glaber_female
ENSCSAVG00000010619	-	72	65.538	ENSHGLG00100008308	PPIL4	66	70.821	Heterocephalus_glaber_male
ENSCSAVG00000010619	-	72	67.601	ENSIPUG00000006626	PPIL4	68	72.615	Ictalurus_punctatus
ENSCSAVG00000010619	-	72	65.231	ENSSTOG00000013980	PPIL4	66	70.213	Ictidomys_tridecemlineatus
ENSCSAVG00000010619	-	72	65.421	ENSJJAG00000017619	Ppil4	66	70.769	Jaculus_jaculus
ENSCSAVG00000010619	-	72	66.978	ENSKMAG00000014367	ppil4	70	72.783	Kryptolebias_marmoratus
ENSCSAVG00000010619	-	72	65.732	ENSLBEG00000012172	ppil4	95	54.357	Labrus_bergylta
ENSCSAVG00000010619	-	72	66.462	ENSLACG00000016551	PPIL4	92	57.205	Latimeria_chalumnae
ENSCSAVG00000010619	-	91	53.722	ENSLOCG00000017002	ppil4	97	55.280	Lepisosteus_oculatus
ENSCSAVG00000010619	-	72	58.589	ENSLAFG00000026804	PPIL4	66	63.636	Loxodonta_africana
ENSCSAVG00000010619	-	72	65.538	ENSMFAG00000032721	PPIL4	66	70.821	Macaca_fascicularis
ENSCSAVG00000010619	-	72	65.538	ENSMMUG00000023067	PPIL4	66	70.821	Macaca_mulatta
ENSCSAVG00000010619	-	72	65.538	ENSMNEG00000042362	PPIL4	66	70.821	Macaca_nemestrina
ENSCSAVG00000010619	-	72	65.538	ENSMLEG00000041942	PPIL4	66	70.821	Mandrillus_leucophaeus
ENSCSAVG00000010619	-	83	56.774	ENSMAMG00000004525	ppil4	99	56.867	Mastacembelus_armatus
ENSCSAVG00000010619	-	72	67.391	ENSMZEG00005015546	ppil4	99	56.276	Maylandia_zebra
ENSCSAVG00000010619	-	67	64.474	ENSMGAG00000012596	PPIL4	65	70.395	Meleagris_gallopavo
ENSCSAVG00000010619	-	72	65.231	ENSMAUG00000015059	Ppil4	66	70.517	Mesocricetus_auratus
ENSCSAVG00000010619	-	72	55.692	ENSMICG00000006287	PPIL4	62	61.231	Microcebus_murinus
ENSCSAVG00000010619	-	72	52.025	ENSMOCG00000000256	-	62	59.385	Microtus_ochrogaster
ENSCSAVG00000010619	-	72	65.231	ENSMOCG00000012720	-	66	70.517	Microtus_ochrogaster
ENSCSAVG00000010619	-	73	66.358	ENSMMOG00000014859	ppil4	99	56.399	Mola_mola
ENSCSAVG00000010619	-	82	60.440	ENSMODG00000016825	PPIL4	90	56.828	Monodelphis_domestica
ENSCSAVG00000010619	-	84	55.063	ENSMALG00000018887	ppil4	99	55.368	Monopterus_albus
ENSCSAVG00000010619	-	72	65.231	MGP_CAROLIEiJ_G0015103	Ppil4	66	70.769	Mus_caroli
ENSCSAVG00000010619	-	72	65.538	ENSMUSG00000015757	Ppil4	66	70.821	Mus_musculus
ENSCSAVG00000010619	-	72	65.538	MGP_PahariEiJ_G0023722	Ppil4	66	70.821	Mus_pahari
ENSCSAVG00000010619	-	72	65.538	MGP_SPRETEiJ_G0015910	Ppil4	66	70.821	Mus_spretus
ENSCSAVG00000010619	-	72	65.231	ENSMPUG00000018073	PPIL4	66	70.213	Mustela_putorius_furo
ENSCSAVG00000010619	-	77	61.494	ENSMLUG00000002766	PPIL4	66	70.517	Myotis_lucifugus
ENSCSAVG00000010619	-	77	61.207	ENSNGAG00000008801	Ppil4	66	70.462	Nannospalax_galili
ENSCSAVG00000010619	-	72	67.391	ENSNBRG00000010947	ppil4	99	56.276	Neolamprologus_brichardi
ENSCSAVG00000010619	-	72	65.538	ENSNLEG00000015316	PPIL4	76	70.821	Nomascus_leucogenys
ENSCSAVG00000010619	-	72	65.846	ENSODEG00000002499	PPIL4	66	70.821	Octodon_degus
ENSCSAVG00000010619	-	72	68.224	ENSONIG00000011400	ppil4	100	60.723	Oreochromis_niloticus
ENSCSAVG00000010619	-	72	62.691	ENSOANG00000001063	PPIL4	79	59.057	Ornithorhynchus_anatinus
ENSCSAVG00000010619	-	72	65.231	ENSOCUG00000007696	PPIL4	66	70.517	Oryctolagus_cuniculus
ENSCSAVG00000010619	-	72	69.737	ENSORLG00000015310	ppil4	96	57.204	Oryzias_latipes
ENSCSAVG00000010619	-	72	66.667	ENSORLG00020008558	ppil4	92	70.548	Oryzias_latipes_hni
ENSCSAVG00000010619	-	72	66.667	ENSORLG00015003655	ppil4	92	70.548	Oryzias_latipes_hsok
ENSCSAVG00000010619	-	72	67.913	ENSOMEG00000011713	ppil4	96	72.069	Oryzias_melastigma
ENSCSAVG00000010619	-	72	56.386	ENSOGAG00000025753	-	74	56.077	Otolemur_garnettii
ENSCSAVG00000010619	-	77	61.337	ENSOGAG00000014153	-	70	71.429	Otolemur_garnettii
ENSCSAVG00000010619	-	72	65.538	ENSOARG00000002675	PPIL4	66	70.517	Ovis_aries
ENSCSAVG00000010619	-	72	65.538	ENSPPAG00000042154	PPIL4	66	70.821	Pan_paniscus
ENSCSAVG00000010619	-	72	65.231	ENSPPRG00000004682	PPIL4	66	70.213	Panthera_pardus
ENSCSAVG00000010619	-	69	64.401	ENSPTIG00000014238	PPIL4	53	69.649	Panthera_tigris_altaica
ENSCSAVG00000010619	-	72	65.538	ENSPTRG00000018692	PPIL4	66	70.821	Pan_troglodytes
ENSCSAVG00000010619	-	72	65.538	ENSPANG00000017996	PPIL4	66	70.821	Papio_anubis
ENSCSAVG00000010619	-	99	53.915	ENSPKIG00000019748	ppil4	95	72.260	Paramormyrops_kingsleyae
ENSCSAVG00000010619	-	55	68.966	ENSPSIG00000016651	PPIL4	100	46.778	Pelodiscus_sinensis
ENSCSAVG00000010619	-	100	53.915	ENSPMGG00000002277	ppil4	99	58.785	Periophthalmus_magnuspinnatus
ENSCSAVG00000010619	-	72	64.923	ENSPEMG00000010912	Ppil4	66	70.154	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010619	-	82	60.440	ENSPCIG00000025561	PPIL4	97	54.832	Phascolarctos_cinereus
ENSCSAVG00000010619	-	72	66.978	ENSPFOG00000004145	ppil4	99	56.780	Poecilia_formosa
ENSCSAVG00000010619	-	72	66.978	ENSPLAG00000001207	ppil4	99	56.992	Poecilia_latipinna
ENSCSAVG00000010619	-	72	67.081	ENSPMEG00000009249	ppil4	97	71.821	Poecilia_mexicana
ENSCSAVG00000010619	-	72	66.667	ENSPREG00000020355	ppil4	99	56.092	Poecilia_reticulata
ENSCSAVG00000010619	-	72	65.538	ENSPPYG00000029525	-	88	70.821	Pongo_abelii
ENSCSAVG00000010619	-	67	52.824	ENSPPYG00000017785	-	79	52.394	Pongo_abelii
ENSCSAVG00000010619	-	72	65.538	ENSPCOG00000016997	PPIL4	66	70.517	Propithecus_coquereli
ENSCSAVG00000010619	-	72	65.231	ENSPVAG00000000746	PPIL4	66	70.213	Pteropus_vampyrus
ENSCSAVG00000010619	-	72	67.391	ENSPNYG00000010608	ppil4	99	56.276	Pundamilia_nyererei
ENSCSAVG00000010619	-	96	55.107	ENSPNAG00000002199	ppil4	93	57.018	Pygocentrus_nattereri
ENSCSAVG00000010619	-	72	65.538	ENSRNOG00000015552	Ppil4	66	70.821	Rattus_norvegicus
ENSCSAVG00000010619	-	74	63.690	ENSRBIG00000043467	PPIL4	72	68.000	Rhinopithecus_bieti
ENSCSAVG00000010619	-	72	65.538	ENSRROG00000002923	PPIL4	66	70.821	Rhinopithecus_roxellana
ENSCSAVG00000010619	-	72	65.538	ENSSBOG00000004498	PPIL4	66	70.821	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010619	-	82	60.165	ENSSHAG00000017140	PPIL4	90	56.954	Sarcophilus_harrisii
ENSCSAVG00000010619	-	72	65.846	ENSSFOG00015020750	ppil4	99	58.009	Scleropages_formosus
ENSCSAVG00000010619	-	88	54.747	ENSSMAG00000017653	ppil4	98	70.068	Scophthalmus_maximus
ENSCSAVG00000010619	-	84	57.019	ENSSDUG00000010647	ppil4	99	57.081	Seriola_dumerili
ENSCSAVG00000010619	-	84	56.209	ENSSLDG00000021975	ppil4	99	56.209	Seriola_lalandi_dorsalis
ENSCSAVG00000010619	-	73	62.727	ENSSARG00000011244	PPIL4	66	68.712	Sorex_araneus
ENSCSAVG00000010619	-	74	65.060	ENSSPUG00000005655	PPIL4	79	65.565	Sphenodon_punctatus
ENSCSAVG00000010619	-	83	56.858	ENSSPAG00000017442	ppil4	99	56.954	Stegastes_partitus
ENSCSAVG00000010619	-	72	65.231	ENSSSCG00000028867	PPIL4	66	70.213	Sus_scrofa
ENSCSAVG00000010619	-	73	64.615	ENSTGUG00000010655	-	68	70.462	Taeniopygia_guttata
ENSCSAVG00000010619	-	72	64.923	ENSTRUG00000006670	ppil4	91	69.153	Takifugu_rubripes
ENSCSAVG00000010619	-	90	54.975	ENSTNIG00000002706	ppil4	99	55.500	Tetraodon_nigroviridis
ENSCSAVG00000010619	-	72	58.462	ENSTTRG00000006014	PPIL4	66	57.846	Tursiops_truncatus
ENSCSAVG00000010619	-	66	64.238	ENSUMAG00000002774	PPIL4	63	69.608	Ursus_maritimus
ENSCSAVG00000010619	-	72	65.231	ENSVPAG00000005157	PPIL4	66	70.213	Vicugna_pacos
ENSCSAVG00000010619	-	72	65.231	ENSVVUG00000005119	PPIL4	62	70.462	Vulpes_vulpes
ENSCSAVG00000010619	-	99	51.464	ENSXETG00000021385	ppil4	96	56.114	Xenopus_tropicalis
ENSCSAVG00000010619	-	72	66.667	ENSXCOG00000001316	ppil4	99	57.930	Xiphophorus_couchianus
ENSCSAVG00000010619	-	72	66.355	ENSXMAG00000004998	ppil4	99	56.568	Xiphophorus_maculatus