EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010630 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 809 bases
Position: chrreftig_9:2095035-2095843
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018059	RNA_POL_M_15KD	PF02150.16	6.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018256	-	809	-	ENSCSAVP00000018059	126 (aa)	-	H2ZKE3

Gene Model

Click here to download ENSCSAVG00000010630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010630's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010630	-	93	80.342	ENSG00000105258	POLR2I	91	83.750	Homo_sapiens
ENSCSAVG00000010630	-	93	80.342	ENSAPOG00000012409	polr2i	93	80.342	Acanthochromis_polyacanthus
ENSCSAVG00000010630	-	93	80.342	ENSAMEG00000000993	POLR2I	94	80.342	Ailuropoda_melanoleuca
ENSCSAVG00000010630	-	93	80.342	ENSAOCG00000024378	polr2i	93	80.342	Amphiprion_ocellaris
ENSCSAVG00000010630	-	93	80.342	ENSAPEG00000021748	polr2i	93	80.342	Amphiprion_percula
ENSCSAVG00000010630	-	93	79.487	ENSATEG00000000758	polr2i	93	79.487	Anabas_testudineus
ENSCSAVG00000010630	-	93	80.342	ENSANAG00000035318	POLR2I	94	80.342	Aotus_nancymaae
ENSCSAVG00000010630	-	93	80.342	ENSACLG00000001663	polr2i	93	80.342	Astatotilapia_calliptera
ENSCSAVG00000010630	-	93	80.342	ENSAMXG00000030198	polr2i	93	80.342	Astyanax_mexicanus
ENSCSAVG00000010630	-	93	80.342	ENSBTAG00000015002	POLR2I	94	80.342	Bos_taurus
ENSCSAVG00000010630	-	93	62.393	WBGene00022400	rpb-9	70	62.393	Caenorhabditis_elegans
ENSCSAVG00000010630	-	93	80.342	ENSCJAG00000009671	POLR2I	94	80.342	Callithrix_jacchus
ENSCSAVG00000010630	-	93	80.342	ENSCAFG00000006601	POLR2I	94	80.342	Canis_familiaris
ENSCSAVG00000010630	-	93	80.342	ENSCAFG00020018113	POLR2I	94	80.342	Canis_lupus_dingo
ENSCSAVG00000010630	-	93	80.342	ENSCHIG00000011961	POLR2I	94	80.342	Capra_hircus
ENSCSAVG00000010630	-	82	55.340	ENSTSYG00000031752	-	95	55.340	Carlito_syrichta
ENSCSAVG00000010630	-	93	80.342	ENSTSYG00000028318	-	100	78.641	Carlito_syrichta
ENSCSAVG00000010630	-	93	80.342	ENSCPOG00000012097	POLR2I	94	80.342	Cavia_porcellus
ENSCSAVG00000010630	-	93	79.487	ENSCCAG00000032214	-	94	79.487	Cebus_capucinus
ENSCSAVG00000010630	-	93	80.342	ENSCCAG00000022138	-	94	80.342	Cebus_capucinus
ENSCSAVG00000010630	-	93	80.342	ENSCATG00000017413	POLR2I	94	80.342	Cercocebus_atys
ENSCSAVG00000010630	-	93	80.342	ENSCLAG00000011800	POLR2I	94	80.342	Chinchilla_lanigera
ENSCSAVG00000010630	-	93	80.342	ENSCSAG00000004254	POLR2I	94	80.342	Chlorocebus_sabaeus
ENSCSAVG00000010630	-	93	80.342	ENSCPBG00000006726	POLR2I	94	80.342	Chrysemys_picta_bellii
ENSCSAVG00000010630	-	77	82.474	ENSCANG00000031951	POLR2I	92	82.474	Colobus_angolensis_palliatus
ENSCSAVG00000010630	-	93	79.487	ENSCSEG00000002213	polr2i	93	79.487	Cynoglossus_semilaevis
ENSCSAVG00000010630	-	93	80.342	ENSCVAG00000014797	polr2i	93	80.342	Cyprinodon_variegatus
ENSCSAVG00000010630	-	93	81.197	ENSDARG00000040443	polr2i	93	81.197	Danio_rerio
ENSCSAVG00000010630	-	93	80.342	ENSDNOG00000015842	POLR2I	94	80.342	Dasypus_novemcinctus
ENSCSAVG00000010630	-	88	62.162	ENSDORG00000028728	-	95	62.162	Dipodomys_ordii
ENSCSAVG00000010630	-	79	62.626	ENSDORG00000028026	-	99	62.626	Dipodomys_ordii
ENSCSAVG00000010630	-	93	80.342	ENSDORG00000001852	-	94	80.342	Dipodomys_ordii
ENSCSAVG00000010630	-	89	61.607	ENSDORG00000029259	-	94	61.607	Dipodomys_ordii
ENSCSAVG00000010630	-	93	74.359	FBgn0004855	RpII15	91	74.359	Drosophila_melanogaster
ENSCSAVG00000010630	-	93	80.342	ENSETEG00000012679	POLR2I	94	80.342	Echinops_telfairi
ENSCSAVG00000010630	-	93	82.051	ENSEBUG00000007333	polr2i	100	79.612	Eptatretus_burgeri
ENSCSAVG00000010630	-	93	80.342	ENSEASG00005002231	POLR2I	94	80.342	Equus_asinus_asinus
ENSCSAVG00000010630	-	93	80.342	ENSECAG00000013654	POLR2I	94	80.342	Equus_caballus
ENSCSAVG00000010630	-	93	80.342	ENSEEUG00000002113	POLR2I	94	80.342	Erinaceus_europaeus
ENSCSAVG00000010630	-	93	80.342	ENSELUG00000018012	polr2i	93	80.342	Esox_lucius
ENSCSAVG00000010630	-	93	80.342	ENSFCAG00000026052	POLR2I	94	80.342	Felis_catus
ENSCSAVG00000010630	-	93	80.342	ENSFDAG00000011350	POLR2I	94	80.342	Fukomys_damarensis
ENSCSAVG00000010630	-	94	80.508	ENSFHEG00000015659	polr2i	94	80.508	Fundulus_heteroclitus
ENSCSAVG00000010630	-	93	80.342	ENSGMOG00000013806	polr2i	93	80.342	Gadus_morhua
ENSCSAVG00000010630	-	93	77.778	ENSGALG00000038595	POLR2I	90	77.778	Gallus_gallus
ENSCSAVG00000010630	-	93	81.197	ENSGAFG00000001037	polr2i	93	81.197	Gambusia_affinis
ENSCSAVG00000010630	-	93	80.342	ENSGACG00000006679	polr2i	93	80.342	Gasterosteus_aculeatus
ENSCSAVG00000010630	-	93	80.342	ENSGAGG00000015806	POLR2I	94	80.342	Gopherus_agassizii
ENSCSAVG00000010630	-	93	80.342	ENSGGOG00000015426	POLR2I	94	80.342	Gorilla_gorilla
ENSCSAVG00000010630	-	93	80.342	ENSHBUG00000004140	polr2i	93	80.342	Haplochromis_burtoni
ENSCSAVG00000010630	-	82	78.641	ENSHGLG00000007388	POLR2I	100	78.641	Heterocephalus_glaber_female
ENSCSAVG00000010630	-	82	78.641	ENSHGLG00100014515	POLR2I	100	78.641	Heterocephalus_glaber_male
ENSCSAVG00000010630	-	93	80.342	ENSHCOG00000010967	polr2i	93	80.342	Hippocampus_comes
ENSCSAVG00000010630	-	93	80.342	ENSIPUG00000001127	polr2i	93	80.342	Ictalurus_punctatus
ENSCSAVG00000010630	-	93	80.342	ENSSTOG00000009411	POLR2I	94	80.342	Ictidomys_tridecemlineatus
ENSCSAVG00000010630	-	93	80.342	ENSJJAG00000014400	Polr2i	94	80.342	Jaculus_jaculus
ENSCSAVG00000010630	-	93	81.197	ENSKMAG00000001567	polr2i	93	81.197	Kryptolebias_marmoratus
ENSCSAVG00000010630	-	93	80.342	ENSLBEG00000001220	polr2i	93	80.342	Labrus_bergylta
ENSCSAVG00000010630	-	63	85.000	ENSLBEG00000028538	-	90	85.000	Labrus_bergylta
ENSCSAVG00000010630	-	93	81.197	ENSLACG00000009590	POLR2I	94	81.197	Latimeria_chalumnae
ENSCSAVG00000010630	-	93	80.342	ENSLOCG00000014818	polr2i	93	80.342	Lepisosteus_oculatus
ENSCSAVG00000010630	-	93	80.342	ENSLAFG00000015527	POLR2I	94	80.342	Loxodonta_africana
ENSCSAVG00000010630	-	93	80.342	ENSMFAG00000039443	POLR2I	94	80.342	Macaca_fascicularis
ENSCSAVG00000010630	-	82	78.641	ENSMMUG00000000522	POLR2I	100	78.641	Macaca_mulatta
ENSCSAVG00000010630	-	93	80.342	ENSMNEG00000029421	POLR2I	94	80.342	Macaca_nemestrina
ENSCSAVG00000010630	-	93	80.342	ENSMLEG00000039720	POLR2I	94	80.342	Mandrillus_leucophaeus
ENSCSAVG00000010630	-	93	79.487	ENSMAMG00000013970	polr2i	93	79.487	Mastacembelus_armatus
ENSCSAVG00000010630	-	93	80.342	ENSMZEG00005013082	polr2i	93	80.342	Maylandia_zebra
ENSCSAVG00000010630	-	93	77.778	ENSMGAG00000008576	POLR2I	94	77.778	Meleagris_gallopavo
ENSCSAVG00000010630	-	93	80.342	ENSMAUG00000001001	Polr2i	94	80.342	Mesocricetus_auratus
ENSCSAVG00000010630	-	93	80.342	ENSMICG00000010241	POLR2I	94	80.342	Microcebus_murinus
ENSCSAVG00000010630	-	93	80.342	ENSMOCG00000011984	Polr2i	94	80.342	Microtus_ochrogaster
ENSCSAVG00000010630	-	82	78.641	ENSMMOG00000004945	polr2i	100	78.641	Mola_mola
ENSCSAVG00000010630	-	93	80.342	ENSMODG00000014172	POLR2I	94	80.342	Monodelphis_domestica
ENSCSAVG00000010630	-	93	80.342	MGP_CAROLIEiJ_G0029507	Polr2i	100	78.641	Mus_caroli
ENSCSAVG00000010630	-	93	80.342	ENSMUSG00000019738	Polr2i	100	80.723	Mus_musculus
ENSCSAVG00000010630	-	93	80.342	MGP_PahariEiJ_G0012741	Polr2i	100	80.723	Mus_pahari
ENSCSAVG00000010630	-	93	80.342	MGP_SPRETEiJ_G0030603	Polr2i	100	78.641	Mus_spretus
ENSCSAVG00000010630	-	93	80.342	ENSMPUG00000005702	POLR2I	94	80.342	Mustela_putorius_furo
ENSCSAVG00000010630	-	93	80.342	ENSMLUG00000012317	POLR2I	94	80.342	Myotis_lucifugus
ENSCSAVG00000010630	-	93	80.342	ENSNGAG00000014966	Polr2i	94	80.342	Nannospalax_galili
ENSCSAVG00000010630	-	93	80.342	ENSNBRG00000000723	polr2i	93	80.342	Neolamprologus_brichardi
ENSCSAVG00000010630	-	93	80.342	ENSNLEG00000011691	POLR2I	94	80.342	Nomascus_leucogenys
ENSCSAVG00000010630	-	93	79.487	ENSOPRG00000008681	-	94	79.487	Ochotona_princeps
ENSCSAVG00000010630	-	93	80.342	ENSOPRG00000001789	-	94	80.342	Ochotona_princeps
ENSCSAVG00000010630	-	93	80.342	ENSODEG00000015015	-	94	80.342	Octodon_degus
ENSCSAVG00000010630	-	92	67.241	ENSODEG00000017901	-	88	67.241	Octodon_degus
ENSCSAVG00000010630	-	93	80.342	ENSONIG00000005397	polr2i	93	80.342	Oreochromis_niloticus
ENSCSAVG00000010630	-	93	80.342	ENSOCUG00000013044	POLR2I	94	80.342	Oryctolagus_cuniculus
ENSCSAVG00000010630	-	93	80.342	ENSOCUG00000024998	-	94	80.342	Oryctolagus_cuniculus
ENSCSAVG00000010630	-	93	81.197	ENSORLG00000013308	polr2i	93	81.197	Oryzias_latipes
ENSCSAVG00000010630	-	93	81.197	ENSORLG00020011281	polr2i	93	81.197	Oryzias_latipes_hni
ENSCSAVG00000010630	-	93	81.197	ENSORLG00015019529	polr2i	93	81.197	Oryzias_latipes_hsok
ENSCSAVG00000010630	-	93	81.197	ENSOMEG00000012586	polr2i	93	81.197	Oryzias_melastigma
ENSCSAVG00000010630	-	93	80.342	ENSOGAG00000024254	POLR2I	94	80.342	Otolemur_garnettii
ENSCSAVG00000010630	-	93	80.342	ENSOARG00000005266	POLR2I	94	80.342	Ovis_aries
ENSCSAVG00000010630	-	93	80.342	ENSPPAG00000033446	POLR2I	94	80.342	Pan_paniscus
ENSCSAVG00000010630	-	93	80.342	ENSPPRG00000007194	POLR2I	94	80.342	Panthera_pardus
ENSCSAVG00000010630	-	93	80.342	ENSPTIG00000018661	POLR2I	94	80.342	Panthera_tigris_altaica
ENSCSAVG00000010630	-	93	80.342	ENSPTRG00000010885	POLR2I	94	80.342	Pan_troglodytes
ENSCSAVG00000010630	-	93	80.342	ENSPANG00000004508	POLR2I	94	80.342	Papio_anubis
ENSCSAVG00000010630	-	93	80.342	ENSPKIG00000001086	polr2i	93	80.342	Paramormyrops_kingsleyae
ENSCSAVG00000010630	-	82	78.641	ENSPSIG00000011560	POLR2I	100	78.641	Pelodiscus_sinensis
ENSCSAVG00000010630	-	93	75.207	ENSPMGG00000016154	polr2i	93	75.207	Periophthalmus_magnuspinnatus
ENSCSAVG00000010630	-	93	80.342	ENSPEMG00000014212	Polr2i	94	80.342	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010630	-	93	80.342	ENSPCIG00000015436	-	94	80.342	Phascolarctos_cinereus
ENSCSAVG00000010630	-	93	81.197	ENSPFOG00000016816	polr2i	93	81.197	Poecilia_formosa
ENSCSAVG00000010630	-	93	81.197	ENSPLAG00000010639	polr2i	93	81.197	Poecilia_latipinna
ENSCSAVG00000010630	-	93	81.197	ENSPMEG00000005956	polr2i	93	81.197	Poecilia_mexicana
ENSCSAVG00000010630	-	93	81.197	ENSPREG00000004227	polr2i	93	81.197	Poecilia_reticulata
ENSCSAVG00000010630	-	93	80.342	ENSPPYG00000009897	POLR2I	94	80.342	Pongo_abelii
ENSCSAVG00000010630	-	93	80.342	ENSPCAG00000003494	POLR2I	94	80.342	Procavia_capensis
ENSCSAVG00000010630	-	93	80.342	ENSPCOG00000018643	POLR2I	94	80.342	Propithecus_coquereli
ENSCSAVG00000010630	-	93	80.342	ENSPVAG00000012883	POLR2I	94	80.342	Pteropus_vampyrus
ENSCSAVG00000010630	-	93	80.342	ENSPNYG00000011908	polr2i	93	80.342	Pundamilia_nyererei
ENSCSAVG00000010630	-	93	80.342	ENSPNAG00000005859	polr2i	93	80.342	Pygocentrus_nattereri
ENSCSAVG00000010630	-	93	80.342	ENSRNOG00000050560	Polr2i	94	80.342	Rattus_norvegicus
ENSCSAVG00000010630	-	93	80.342	ENSRNOG00000020799	LOC103690054	94	80.342	Rattus_norvegicus
ENSCSAVG00000010630	-	93	80.342	ENSRBIG00000037225	POLR2I	94	80.342	Rhinopithecus_bieti
ENSCSAVG00000010630	-	93	80.342	ENSRROG00000042843	POLR2I	94	80.342	Rhinopithecus_roxellana
ENSCSAVG00000010630	-	88	45.946	YGL070C	RPB9	89	45.946	Saccharomyces_cerevisiae
ENSCSAVG00000010630	-	92	64.655	ENSSBOG00000022998	-	68	64.655	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010630	-	93	80.342	ENSSBOG00000030799	-	94	80.342	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010630	-	93	80.342	ENSSFOG00015022523	polr2i	93	80.342	Scleropages_formosus
ENSCSAVG00000010630	-	93	79.487	ENSSMAG00000003335	polr2i	93	79.487	Scophthalmus_maximus
ENSCSAVG00000010630	-	93	79.487	ENSSDUG00000005483	polr2i	93	79.487	Seriola_dumerili
ENSCSAVG00000010630	-	93	79.487	ENSSLDG00000009341	polr2i	93	79.487	Seriola_lalandi_dorsalis
ENSCSAVG00000010630	-	93	80.342	ENSSARG00000009331	POLR2I	94	80.342	Sorex_araneus
ENSCSAVG00000010630	-	93	79.487	ENSSPUG00000012658	POLR2I	94	79.487	Sphenodon_punctatus
ENSCSAVG00000010630	-	93	80.342	ENSSPAG00000015734	polr2i	93	80.342	Stegastes_partitus
ENSCSAVG00000010630	-	93	80.342	ENSSSCG00000039196	POLR2I	94	80.342	Sus_scrofa
ENSCSAVG00000010630	-	93	80.342	ENSTRUG00000022235	polr2i	93	80.342	Takifugu_rubripes
ENSCSAVG00000010630	-	93	80.342	ENSTNIG00000011737	polr2i	93	80.342	Tetraodon_nigroviridis
ENSCSAVG00000010630	-	93	80.342	ENSTTRG00000003919	POLR2I	94	80.342	Tursiops_truncatus
ENSCSAVG00000010630	-	93	80.342	ENSUAMG00000020575	POLR2I	94	80.342	Ursus_americanus
ENSCSAVG00000010630	-	93	80.342	ENSUMAG00000020809	POLR2I	94	80.342	Ursus_maritimus
ENSCSAVG00000010630	-	93	80.342	ENSVVUG00000013588	POLR2I	94	80.342	Vulpes_vulpes
ENSCSAVG00000010630	-	93	81.197	ENSXCOG00000001119	polr2i	93	81.197	Xiphophorus_couchianus
ENSCSAVG00000010630	-	93	81.197	ENSXMAG00000021278	polr2i	93	81.197	Xiphophorus_maculatus