EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010638 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 12358 bases
Position: chrreftig_48:1726236-1738593
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018090	Ribonuclease_3	PF00636.26	4.9e-39	1	2
ENSCSAVP00000018090	Ribonuclease_3	PF00636.26	4.9e-39	2	2
ENSCSAVP00000018089	Ribonuclease_3	PF00636.26	6.4e-39	1	2
ENSCSAVP00000018089	Ribonuclease_3	PF00636.26	6.4e-39	2	2
ENSCSAVP00000018089	dsrm	PF00035.26	9.7e-14	1	1
ENSCSAVP00000018090	dsrm	PF00035.26	1.1e-13	1	1
ENSCSAVP00000018090	Ribonucleas_3_3	PF14622.6	1.3e-39	1	2
ENSCSAVP00000018090	Ribonucleas_3_3	PF14622.6	1.3e-39	2	2
ENSCSAVP00000018089	Ribonucleas_3_3	PF14622.6	1.3e-39	1	2
ENSCSAVP00000018089	Ribonucleas_3_3	PF14622.6	1.3e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018287	-	2609	-	ENSCSAVP00000018090	839 (aa)	-	H2ZKH4
ENSCSAVT00000018286	-	2609	-	ENSCSAVP00000018089	837 (aa)	-	H2ZKH3
ENSCSAVT00000018288	-	229	-	ENSCSAVP00000018091	59 (aa)	-	H2ZKH5

Gene Model

Click here to download ENSCSAVG00000010638's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010638's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010638	-	99	58.852	ENSG00000113360	DROSHA	62	58.852	Homo_sapiens
ENSCSAVG00000010638	-	99	58.852	ENSAMEG00000006000	DROSHA	61	58.014	Ailuropoda_melanoleuca
ENSCSAVG00000010638	-	99	59.569	ENSACIG00000019308	drosha	82	58.852	Amphilophus_citrinellus
ENSCSAVG00000010638	-	99	59.809	ENSATEG00000021939	drosha	63	59.809	Anabas_testudineus
ENSCSAVG00000010638	-	99	58.852	ENSAPLG00000004372	DROSHA	61	58.134	Anas_platyrhynchos
ENSCSAVG00000010638	-	99	58.522	ENSACAG00000007970	DROSHA	60	58.522	Anolis_carolinensis
ENSCSAVG00000010638	-	99	56.496	ENSANAG00000020506	DROSHA	81	55.662	Aotus_nancymaae
ENSCSAVG00000010638	-	99	59.211	ENSACLG00000012227	drosha	62	58.493	Astatotilapia_calliptera
ENSCSAVG00000010638	-	98	59.951	ENSAMXG00000005582	drosha	64	59.096	Astyanax_mexicanus
ENSCSAVG00000010638	-	99	58.971	ENSBTAG00000017551	DROSHA	64	58.971	Bos_taurus
ENSCSAVG00000010638	-	97	34.597	WBGene00009163	drsh-1	74	34.597	Caenorhabditis_elegans
ENSCSAVG00000010638	-	99	58.852	ENSCJAG00000018881	DROSHA	61	58.014	Callithrix_jacchus
ENSCSAVG00000010638	-	73	61.601	ENSCAFG00000018939	-	96	61.601	Canis_familiaris
ENSCSAVG00000010638	-	99	58.852	ENSCAFG00020017559	DROSHA	93	59.791	Canis_lupus_dingo
ENSCSAVG00000010638	-	99	58.971	ENSCHIG00000022226	DROSHA	64	58.134	Capra_hircus
ENSCSAVG00000010638	-	62	60.271	ENSCAPG00000015787	-	95	60.271	Cavia_aperea
ENSCSAVG00000010638	-	99	58.852	ENSCPOG00000015051	DROSHA	64	58.852	Cavia_porcellus
ENSCSAVG00000010638	-	99	58.852	ENSCCAG00000027283	DROSHA	82	58.014	Cebus_capucinus
ENSCSAVG00000010638	-	99	58.852	ENSCATG00000016833	DROSHA	82	57.330	Cercocebus_atys
ENSCSAVG00000010638	-	99	58.852	ENSCLAG00000013048	DROSHA	63	58.014	Chinchilla_lanigera
ENSCSAVG00000010638	-	99	58.852	ENSCSAG00000017202	DROSHA	61	58.014	Chlorocebus_sabaeus
ENSCSAVG00000010638	-	82	49.780	ENSCHOG00000011786	DROSHA	51	49.780	Choloepus_hoffmanni
ENSCSAVG00000010638	-	99	59.770	ENSCPBG00000000467	DROSHA	63	58.852	Chrysemys_picta_bellii
ENSCSAVG00000010638	-	63	93.289	ENSCING00000001525	-	100	93.289	Ciona_intestinalis
ENSCSAVG00000010638	-	99	58.852	ENSCANG00000035071	DROSHA	82	57.057	Colobus_angolensis_palliatus
ENSCSAVG00000010638	-	99	58.971	ENSCGRG00001008885	Drosha	61	58.134	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010638	-	99	58.971	ENSCGRG00000006944	Drosha	61	58.134	Cricetulus_griseus_crigri
ENSCSAVG00000010638	-	99	59.450	ENSCSEG00000001452	drosha	62	58.732	Cynoglossus_semilaevis
ENSCSAVG00000010638	-	99	60.167	ENSCVAG00000004619	drosha	62	60.167	Cyprinodon_variegatus
ENSCSAVG00000010638	-	99	59.334	ENSDARG00000055563	drosha	65	58.383	Danio_rerio
ENSCSAVG00000010638	-	99	58.852	ENSDNOG00000001537	DROSHA	61	58.014	Dasypus_novemcinctus
ENSCSAVG00000010638	-	99	58.852	ENSDORG00000005624	Drosha	64	58.014	Dipodomys_ordii
ENSCSAVG00000010638	-	99	52.184	FBgn0026722	drosha	63	52.184	Drosophila_melanogaster
ENSCSAVG00000010638	-	91	56.188	ENSETEG00000007814	DROSHA	55	56.188	Echinops_telfairi
ENSCSAVG00000010638	-	81	57.227	ENSEBUG00000005974	-	98	57.227	Eptatretus_burgeri
ENSCSAVG00000010638	-	99	58.852	ENSEASG00005007149	DROSHA	64	58.014	Equus_asinus_asinus
ENSCSAVG00000010638	-	99	58.852	ENSECAG00000013578	DROSHA	62	58.014	Equus_caballus
ENSCSAVG00000010638	-	99	55.742	ENSEEUG00000006351	DROSHA	61	54.904	Erinaceus_europaeus
ENSCSAVG00000010638	-	98	59.341	ENSELUG00000015039	drosha	59	58.293	Esox_lucius
ENSCSAVG00000010638	-	99	58.852	ENSFCAG00000000360	DROSHA	64	58.014	Felis_catus
ENSCSAVG00000010638	-	99	58.612	ENSFALG00000012843	DROSHA	61	58.612	Ficedula_albicollis
ENSCSAVG00000010638	-	99	58.852	ENSFDAG00000018414	DROSHA	62	58.852	Fukomys_damarensis
ENSCSAVG00000010638	-	84	54.765	ENSFHEG00000003840	drosha	58	54.351	Fundulus_heteroclitus
ENSCSAVG00000010638	-	99	58.852	ENSGALG00000012916	DROSHA	63	58.134	Gallus_gallus
ENSCSAVG00000010638	-	99	59.809	ENSGAFG00000016853	drosha	64	59.091	Gambusia_affinis
ENSCSAVG00000010638	-	99	59.189	ENSGAGG00000005621	DROSHA	62	59.189	Gopherus_agassizii
ENSCSAVG00000010638	-	99	58.852	ENSGGOG00000011006	DROSHA	82	57.449	Gorilla_gorilla
ENSCSAVG00000010638	-	96	55.666	ENSHBUG00000015907	drosha	62	55.666	Haplochromis_burtoni
ENSCSAVG00000010638	-	99	58.852	ENSHGLG00000018873	DROSHA	62	58.014	Heterocephalus_glaber_female
ENSCSAVG00000010638	-	99	58.852	ENSHGLG00100015793	DROSHA	61	58.014	Heterocephalus_glaber_male
ENSCSAVG00000010638	-	99	59.330	ENSHCOG00000008454	drosha	70	58.612	Hippocampus_comes
ENSCSAVG00000010638	-	99	56.870	ENSIPUG00000021202	drosha	64	56.454	Ictalurus_punctatus
ENSCSAVG00000010638	-	99	57.126	ENSSTOG00000016323	DROSHA	95	62.597	Ictidomys_tridecemlineatus
ENSCSAVG00000010638	-	99	58.732	ENSJJAG00000019758	Drosha	61	57.895	Jaculus_jaculus
ENSCSAVG00000010638	-	99	58.987	ENSLBEG00000006606	drosha	65	58.987	Labrus_bergylta
ENSCSAVG00000010638	-	99	59.569	ENSLACG00000005937	DROSHA	62	58.852	Latimeria_chalumnae
ENSCSAVG00000010638	-	99	58.789	ENSLOCG00000012852	drosha	62	57.692	Lepisosteus_oculatus
ENSCSAVG00000010638	-	99	59.091	ENSLAFG00000013831	DROSHA	68	58.134	Loxodonta_africana
ENSCSAVG00000010638	-	99	58.852	ENSMFAG00000003055	DROSHA	63	57.330	Macaca_fascicularis
ENSCSAVG00000010638	-	99	58.852	ENSMMUG00000012193	DROSHA	82	58.014	Macaca_mulatta
ENSCSAVG00000010638	-	99	58.852	ENSMNEG00000037529	DROSHA	63	57.330	Macaca_nemestrina
ENSCSAVG00000010638	-	99	54.545	ENSMLEG00000024167	DROSHA	61	53.828	Mandrillus_leucophaeus
ENSCSAVG00000010638	-	99	59.330	ENSMAMG00000012613	drosha	81	57.775	Mastacembelus_armatus
ENSCSAVG00000010638	-	99	59.211	ENSMZEG00005019487	drosha	62	58.493	Maylandia_zebra
ENSCSAVG00000010638	-	99	58.971	ENSMGAG00000005087	DROSHA	63	58.254	Meleagris_gallopavo
ENSCSAVG00000010638	-	99	58.971	ENSMAUG00000002863	Drosha	61	58.134	Mesocricetus_auratus
ENSCSAVG00000010638	-	99	57.988	ENSMICG00000002241	DROSHA	82	55.647	Microcebus_murinus
ENSCSAVG00000010638	-	99	58.971	ENSMOCG00000015044	Drosha	61	58.134	Microtus_ochrogaster
ENSCSAVG00000010638	-	99	56.818	ENSMMOG00000004016	drosha	81	55.981	Mola_mola
ENSCSAVG00000010638	-	99	57.509	ENSMODG00000004807	DROSHA	63	56.810	Monodelphis_domestica
ENSCSAVG00000010638	-	99	59.450	ENSMALG00000010542	drosha	62	58.732	Monopterus_albus
ENSCSAVG00000010638	-	99	58.852	MGP_CAROLIEiJ_G0019687	Drosha	82	58.014	Mus_caroli
ENSCSAVG00000010638	-	99	58.852	ENSMUSG00000022191	Drosha	61	58.014	Mus_musculus
ENSCSAVG00000010638	-	99	58.852	MGP_PahariEiJ_G0016063	Drosha	82	58.014	Mus_pahari
ENSCSAVG00000010638	-	99	58.971	MGP_SPRETEiJ_G0020580	Drosha	82	58.134	Mus_spretus
ENSCSAVG00000010638	-	99	58.852	ENSMPUG00000015237	DROSHA	61	58.014	Mustela_putorius_furo
ENSCSAVG00000010638	-	99	58.373	ENSMLUG00000002581	DROSHA	61	57.536	Myotis_lucifugus
ENSCSAVG00000010638	-	99	55.744	ENSNGAG00000017329	Drosha	58	61.601	Nannospalax_galili
ENSCSAVG00000010638	-	99	50.477	ENSNBRG00000001870	drosha	83	49.761	Neolamprologus_brichardi
ENSCSAVG00000010638	-	99	58.852	ENSNLEG00000013963	DROSHA	82	57.449	Nomascus_leucogenys
ENSCSAVG00000010638	-	97	45.543	ENSMEUG00000002029	DROSHA	62	45.655	Notamacropus_eugenii
ENSCSAVG00000010638	-	85	54.085	ENSOPRG00000010845	DROSHA	52	53.099	Ochotona_princeps
ENSCSAVG00000010638	-	99	58.852	ENSODEG00000001911	DROSHA	61	58.014	Octodon_degus
ENSCSAVG00000010638	-	99	59.091	ENSONIG00000006578	drosha	61	58.373	Oreochromis_niloticus
ENSCSAVG00000010638	-	90	48.110	ENSOANG00000015744	-	97	48.110	Ornithorhynchus_anatinus
ENSCSAVG00000010638	-	99	58.852	ENSOCUG00000000367	DROSHA	61	58.014	Oryctolagus_cuniculus
ENSCSAVG00000010638	-	99	59.809	ENSORLG00000013592	drosha	63	59.809	Oryzias_latipes
ENSCSAVG00000010638	-	99	59.189	ENSORLG00020002854	drosha	81	58.473	Oryzias_latipes_hni
ENSCSAVG00000010638	-	99	59.809	ENSORLG00015003156	drosha	81	59.091	Oryzias_latipes_hsok
ENSCSAVG00000010638	-	99	59.450	ENSOMEG00000001062	drosha	63	58.732	Oryzias_melastigma
ENSCSAVG00000010638	-	99	57.587	ENSOGAG00000005424	DROSHA	68	56.750	Otolemur_garnettii
ENSCSAVG00000010638	-	99	58.852	ENSPPAG00000037526	DROSHA	81	57.092	Pan_paniscus
ENSCSAVG00000010638	-	99	58.852	ENSPPRG00000002687	DROSHA	62	58.852	Panthera_pardus
ENSCSAVG00000010638	-	99	58.852	ENSPTIG00000017523	DROSHA	62	58.852	Panthera_tigris_altaica
ENSCSAVG00000010638	-	99	58.852	ENSPTRG00000016762	DROSHA	64	58.014	Pan_troglodytes
ENSCSAVG00000010638	-	99	58.852	ENSPANG00000003027	DROSHA	63	57.330	Papio_anubis
ENSCSAVG00000010638	-	99	59.330	ENSPKIG00000011514	drosha	62	60.026	Paramormyrops_kingsleyae
ENSCSAVG00000010638	-	52	62.125	ENSPMGG00000016027	drosha	88	62.125	Periophthalmus_magnuspinnatus
ENSCSAVG00000010638	-	99	58.971	ENSPEMG00000000607	Drosha	61	58.134	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010638	-	99	58.971	ENSPCIG00000006010	DROSHA	61	58.971	Phascolarctos_cinereus
ENSCSAVG00000010638	-	99	59.809	ENSPREG00000022302	drosha	65	59.091	Poecilia_reticulata
ENSCSAVG00000010638	-	99	58.852	ENSPPYG00000015370	DROSHA	61	58.014	Pongo_abelii
ENSCSAVG00000010638	-	99	44.737	ENSPCAG00000007190	DROSHA	61	44.737	Procavia_capensis
ENSCSAVG00000010638	-	99	56.100	ENSPCOG00000028511	DROSHA	81	55.263	Propithecus_coquereli
ENSCSAVG00000010638	-	99	54.251	ENSPVAG00000013167	DROSHA	61	54.251	Pteropus_vampyrus
ENSCSAVG00000010638	-	99	59.211	ENSPNYG00000000398	drosha	82	57.775	Pundamilia_nyererei
ENSCSAVG00000010638	-	99	59.330	ENSPNAG00000011876	drosha	69	58.493	Pygocentrus_nattereri
ENSCSAVG00000010638	-	99	58.852	ENSRNOG00000013451	Drosha	61	58.014	Rattus_norvegicus
ENSCSAVG00000010638	-	99	57.945	ENSRBIG00000032786	DROSHA	81	55.662	Rhinopithecus_bieti
ENSCSAVG00000010638	-	99	58.852	ENSRROG00000028199	DROSHA	63	58.014	Rhinopithecus_roxellana
ENSCSAVG00000010638	-	99	58.852	ENSSBOG00000024008	DROSHA	81	57.416	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010638	-	99	58.760	ENSSHAG00000015198	DROSHA	81	58.045	Sarcophilus_harrisii
ENSCSAVG00000010638	-	99	58.493	ENSSFOG00015009776	drosha	66	57.775	Scleropages_formosus
ENSCSAVG00000010638	-	99	59.450	ENSSMAG00000008069	drosha	63	58.974	Scophthalmus_maximus
ENSCSAVG00000010638	-	99	59.569	ENSSDUG00000010944	drosha	82	58.852	Seriola_dumerili
ENSCSAVG00000010638	-	99	59.569	ENSSLDG00000025271	drosha	82	58.852	Seriola_lalandi_dorsalis
ENSCSAVG00000010638	-	89	73.810	ENSSARG00000004436	-	55	73.810	Sorex_araneus
ENSCSAVG00000010638	-	99	55.383	ENSSPUG00000006902	DROSHA	61	55.383	Sphenodon_punctatus
ENSCSAVG00000010638	-	99	58.971	ENSSSCG00000016809	DROSHA	64	58.507	Sus_scrofa
ENSCSAVG00000010638	-	99	58.303	ENSTGUG00000001955	DROSHA	61	57.706	Taeniopygia_guttata
ENSCSAVG00000010638	-	92	58.968	ENSTRUG00000017778	drosha	61	58.065	Takifugu_rubripes
ENSCSAVG00000010638	-	99	58.929	ENSTNIG00000008688	drosha	82	58.214	Tetraodon_nigroviridis
ENSCSAVG00000010638	-	89	60.606	ENSTBEG00000000537	DROSHA	56	60.606	Tupaia_belangeri
ENSCSAVG00000010638	-	99	58.971	ENSTTRG00000004210	DROSHA	61	58.134	Tursiops_truncatus
ENSCSAVG00000010638	-	99	58.852	ENSUAMG00000025257	DROSHA	62	58.852	Ursus_americanus
ENSCSAVG00000010638	-	99	58.852	ENSUMAG00000014097	DROSHA	91	59.791	Ursus_maritimus
ENSCSAVG00000010638	-	99	54.545	ENSVPAG00000011260	DROSHA	75	54.545	Vicugna_pacos
ENSCSAVG00000010638	-	99	58.852	ENSVVUG00000022212	DROSHA	95	59.613	Vulpes_vulpes
ENSCSAVG00000010638	-	99	57.637	ENSXETG00000016701	drosha	63	55.370	Xenopus_tropicalis
ENSCSAVG00000010638	-	54	55.066	ENSXCOG00000015325	drosha	90	55.066	Xiphophorus_couchianus