EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010649 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 10036 bases
Position: chrreftig_9:2168761-2178796
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018110	efThoc1	PF11957.8	9.8e-122	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018307	-	2021	-	ENSCSAVP00000018110	623 (aa)	-	H2ZKJ4
ENSCSAVT00000018308	-	469	-	ENSCSAVP00000018111	74 (aa)	-	H2ZKJ5

Gene Model

Click here to download ENSCSAVG00000010649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010649	-	99	46.815	ENSG00000079134	THOC1	99	49.281	Homo_sapiens
ENSCSAVG00000010649	-	99	46.593	ENSAMEG00000006645	THOC1	92	47.385	Ailuropoda_melanoleuca
ENSCSAVG00000010649	-	100	46.645	ENSACIG00000019392	thoc1	94	47.764	Amphilophus_citrinellus
ENSCSAVG00000010649	-	100	46.900	ENSAOCG00000008391	thoc1	94	46.994	Amphiprion_ocellaris
ENSCSAVG00000010649	-	100	47.310	ENSAPEG00000001093	thoc1	94	47.559	Amphiprion_percula
ENSCSAVG00000010649	-	100	47.161	ENSATEG00000004783	thoc1	94	47.410	Anabas_testudineus
ENSCSAVG00000010649	-	99	46.975	ENSAPLG00000016149	THOC1	92	47.771	Anas_platyrhynchos
ENSCSAVG00000010649	-	99	46.984	ENSACAG00000008307	THOC1	91	46.984	Anolis_carolinensis
ENSCSAVG00000010649	-	99	46.288	ENSANAG00000033200	THOC1	93	47.077	Aotus_nancymaae
ENSCSAVG00000010649	-	100	47.152	ENSACLG00000016836	thoc1	94	47.402	Astatotilapia_calliptera
ENSCSAVG00000010649	-	99	46.288	ENSAMXG00000014708	thoc1	96	46.288	Astyanax_mexicanus
ENSCSAVG00000010649	-	99	46.656	ENSBTAG00000019215	THOC1	93	47.452	Bos_taurus
ENSCSAVG00000010649	-	74	35.642	WBGene00020172	thoc-1	72	35.484	Caenorhabditis_elegans
ENSCSAVG00000010649	-	99	46.815	ENSCJAG00000020450	THOC1	93	47.611	Callithrix_jacchus
ENSCSAVG00000010649	-	99	46.497	ENSCAFG00000018324	THOC1	93	47.293	Canis_familiaris
ENSCSAVG00000010649	-	99	46.497	ENSCAFG00020017894	THOC1	93	47.293	Canis_lupus_dingo
ENSCSAVG00000010649	-	99	46.656	ENSCHIG00000015399	THOC1	95	47.452	Capra_hircus
ENSCSAVG00000010649	-	99	46.338	ENSTSYG00000010585	THOC1	92	47.134	Carlito_syrichta
ENSCSAVG00000010649	-	99	34.173	ENSCAPG00000016270	THOC1	93	34.810	Cavia_aperea
ENSCSAVG00000010649	-	99	47.068	ENSCPOG00000000959	THOC1	93	47.771	Cavia_porcellus
ENSCSAVG00000010649	-	99	46.815	ENSCCAG00000025766	THOC1	93	47.611	Cebus_capucinus
ENSCSAVG00000010649	-	99	45.959	ENSCATG00000028180	THOC1	91	49.701	Cercocebus_atys
ENSCSAVG00000010649	-	99	47.134	ENSCLAG00000009117	THOC1	95	47.930	Chinchilla_lanigera
ENSCSAVG00000010649	-	99	46.815	ENSCSAG00000017631	THOC1	93	47.611	Chlorocebus_sabaeus
ENSCSAVG00000010649	-	82	50.617	ENSCHOG00000010609	THOC1	77	50.617	Choloepus_hoffmanni
ENSCSAVG00000010649	-	99	46.264	ENSCPBG00000027558	THOC1	93	46.741	Chrysemys_picta_bellii
ENSCSAVG00000010649	-	73	82.684	ENSCING00000007663	-	93	82.684	Ciona_intestinalis
ENSCSAVG00000010649	-	99	46.815	ENSCANG00000034265	THOC1	92	49.701	Colobus_angolensis_palliatus
ENSCSAVG00000010649	-	99	45.642	ENSCGRG00001016464	Thoc1	93	46.434	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010649	-	99	45.642	ENSCGRG00000010269	-	95	46.434	Cricetulus_griseus_crigri
ENSCSAVG00000010649	-	93	40.468	ENSCGRG00000003390	-	97	40.468	Cricetulus_griseus_crigri
ENSCSAVG00000010649	-	100	47.867	ENSCSEG00000012486	thoc1	98	48.494	Cynoglossus_semilaevis
ENSCSAVG00000010649	-	100	47.785	ENSCVAG00000020600	thoc1	94	47.785	Cyprinodon_variegatus
ENSCSAVG00000010649	-	99	48.504	ENSDARG00000088246	thoc1	94	48.504	Danio_rerio
ENSCSAVG00000010649	-	99	46.656	ENSDNOG00000019217	THOC1	93	46.656	Dasypus_novemcinctus
ENSCSAVG00000010649	-	99	45.095	ENSDORG00000008060	Thoc1	94	45.886	Dipodomys_ordii
ENSCSAVG00000010649	-	80	40.678	FBgn0037382	Hpr1	70	40.678	Drosophila_melanogaster
ENSCSAVG00000010649	-	89	33.628	ENSETEG00000004165	THOC1	92	33.628	Echinops_telfairi
ENSCSAVG00000010649	-	97	46.104	ENSEBUG00000005998	thoc1	97	46.104	Eptatretus_burgeri
ENSCSAVG00000010649	-	99	47.134	ENSEASG00005002549	THOC1	89	47.930	Equus_asinus_asinus
ENSCSAVG00000010649	-	99	46.910	ENSECAG00000009267	THOC1	83	47.702	Equus_caballus
ENSCSAVG00000010649	-	80	38.776	ENSEEUG00000012214	-	76	38.776	Erinaceus_europaeus
ENSCSAVG00000010649	-	100	48.509	ENSELUG00000023277	thoc1	94	48.509	Esox_lucius
ENSCSAVG00000010649	-	99	46.276	ENSFCAG00000022454	THOC1	80	47.068	Felis_catus
ENSCSAVG00000010649	-	99	46.057	ENSFALG00000006205	THOC1	95	47.244	Ficedula_albicollis
ENSCSAVG00000010649	-	99	47.068	ENSFDAG00000006842	THOC1	94	47.861	Fukomys_damarensis
ENSCSAVG00000010649	-	100	48.101	ENSFHEG00000008841	thoc1	96	47.302	Fundulus_heteroclitus
ENSCSAVG00000010649	-	100	46.688	ENSGMOG00000011486	thoc1	94	46.939	Gadus_morhua
ENSCSAVG00000010649	-	99	46.178	ENSGALG00000014915	THOC1	93	47.143	Gallus_gallus
ENSCSAVG00000010649	-	100	48.101	ENSGAFG00000021464	thoc1	96	47.536	Gambusia_affinis
ENSCSAVG00000010649	-	100	46.994	ENSGACG00000017361	thoc1	94	47.244	Gasterosteus_aculeatus
ENSCSAVG00000010649	-	99	46.549	ENSGAGG00000021230	-	91	46.741	Gopherus_agassizii
ENSCSAVG00000010649	-	99	46.910	ENSGGOG00000003013	THOC1	92	47.702	Gorilla_gorilla
ENSCSAVG00000010649	-	100	47.310	ENSHBUG00000009096	thoc1	94	47.559	Haplochromis_burtoni
ENSCSAVG00000010649	-	99	46.975	ENSHGLG00000003712	-	93	47.771	Heterocephalus_glaber_female
ENSCSAVG00000010649	-	66	40.816	ENSHGLG00000009264	-	89	42.188	Heterocephalus_glaber_female
ENSCSAVG00000010649	-	64	40.506	ENSHGLG00100002225	-	88	41.799	Heterocephalus_glaber_male
ENSCSAVG00000010649	-	99	47.134	ENSHGLG00100003570	THOC1	93	47.930	Heterocephalus_glaber_male
ENSCSAVG00000010649	-	89	47.090	ENSIPUG00000005306	thoc1	93	47.090	Ictalurus_punctatus
ENSCSAVG00000010649	-	99	46.815	ENSSTOG00000006484	THOC1	93	47.611	Ictidomys_tridecemlineatus
ENSCSAVG00000010649	-	54	45.640	ENSJJAG00000014893	-	94	45.640	Jaculus_jaculus
ENSCSAVG00000010649	-	100	47.068	ENSKMAG00000003904	thoc1	94	47.068	Kryptolebias_marmoratus
ENSCSAVG00000010649	-	100	47.402	ENSLBEG00000020372	thoc1	92	47.402	Labrus_bergylta
ENSCSAVG00000010649	-	100	47.785	ENSLACG00000014869	THOC1	93	47.943	Latimeria_chalumnae
ENSCSAVG00000010649	-	100	48.357	ENSLOCG00000002097	thoc1	94	48.670	Lepisosteus_oculatus
ENSCSAVG00000010649	-	99	46.910	ENSLAFG00000009585	THOC1	93	47.611	Loxodonta_africana
ENSCSAVG00000010649	-	99	46.910	ENSMFAG00000041520	THOC1	92	47.611	Macaca_fascicularis
ENSCSAVG00000010649	-	99	46.815	ENSMMUG00000004662	THOC1	93	47.611	Macaca_mulatta
ENSCSAVG00000010649	-	99	46.910	ENSMNEG00000040177	THOC1	92	47.611	Macaca_nemestrina
ENSCSAVG00000010649	-	99	46.910	ENSMLEG00000034201	THOC1	92	47.611	Mandrillus_leucophaeus
ENSCSAVG00000010649	-	100	47.077	ENSMAMG00000016747	thoc1	98	47.327	Mastacembelus_armatus
ENSCSAVG00000010649	-	100	47.152	ENSMZEG00005024609	thoc1	94	47.402	Maylandia_zebra
ENSCSAVG00000010649	-	99	45.800	ENSMGAG00000009811	THOC1	95	46.835	Meleagris_gallopavo
ENSCSAVG00000010649	-	99	45.642	ENSMAUG00000010272	Thoc1	93	46.593	Mesocricetus_auratus
ENSCSAVG00000010649	-	99	46.815	ENSMICG00000027200	THOC1	93	47.611	Microcebus_murinus
ENSCSAVG00000010649	-	99	45.008	ENSMOCG00000014536	-	80	45.959	Microtus_ochrogaster
ENSCSAVG00000010649	-	95	42.857	ENSMOCG00000014924	-	87	43.866	Microtus_ochrogaster
ENSCSAVG00000010649	-	98	47.596	ENSMMOG00000011772	thoc1	99	47.650	Mola_mola
ENSCSAVG00000010649	-	99	47.393	ENSMODG00000021482	THOC1	93	47.792	Monodelphis_domestica
ENSCSAVG00000010649	-	100	47.634	ENSMALG00000021872	thoc1	97	47.452	Monopterus_albus
ENSCSAVG00000010649	-	99	45.959	MGP_CAROLIEiJ_G0021989	Thoc1	93	46.815	Mus_caroli
ENSCSAVG00000010649	-	99	45.959	ENSMUSG00000024287	Thoc1	93	46.815	Mus_musculus
ENSCSAVG00000010649	-	99	45.959	MGP_PahariEiJ_G0018726	Thoc1	93	46.815	Mus_pahari
ENSCSAVG00000010649	-	99	45.959	MGP_SPRETEiJ_G0022905	Thoc1	93	46.815	Mus_spretus
ENSCSAVG00000010649	-	99	46.497	ENSMPUG00000005448	THOC1	93	47.385	Mustela_putorius_furo
ENSCSAVG00000010649	-	58	44.110	ENSMLUG00000024912	-	91	44.110	Myotis_lucifugus
ENSCSAVG00000010649	-	91	42.708	ENSMLUG00000027965	-	93	43.576	Myotis_lucifugus
ENSCSAVG00000010649	-	99	46.741	ENSMLUG00000004090	-	93	46.835	Myotis_lucifugus
ENSCSAVG00000010649	-	99	46.338	ENSNGAG00000001401	-	93	47.134	Nannospalax_galili
ENSCSAVG00000010649	-	100	36.045	ENSNGAG00000008061	-	94	36.984	Nannospalax_galili
ENSCSAVG00000010649	-	100	47.627	ENSNBRG00000005991	thoc1	94	47.874	Neolamprologus_brichardi
ENSCSAVG00000010649	-	99	46.815	ENSNLEG00000006835	THOC1	93	47.611	Nomascus_leucogenys
ENSCSAVG00000010649	-	72	49.237	ENSMEUG00000009756	THOC1	70	49.237	Notamacropus_eugenii
ENSCSAVG00000010649	-	99	39.809	ENSOPRG00000001108	THOC1	93	40.605	Ochotona_princeps
ENSCSAVG00000010649	-	99	45.166	ENSODEG00000006623	THOC1	92	45.959	Octodon_degus
ENSCSAVG00000010649	-	100	47.310	ENSONIG00000009440	thoc1	93	47.559	Oreochromis_niloticus
ENSCSAVG00000010649	-	99	47.227	ENSOCUG00000011601	THOC1	93	47.930	Oryctolagus_cuniculus
ENSCSAVG00000010649	-	99	47.536	ENSORLG00000017629	thoc1	94	47.627	Oryzias_latipes
ENSCSAVG00000010649	-	99	47.377	ENSORLG00020007567	thoc1	94	47.468	Oryzias_latipes_hni
ENSCSAVG00000010649	-	99	47.536	ENSORLG00015007356	thoc1	95	48.160	Oryzias_latipes_hsok
ENSCSAVG00000010649	-	99	47.452	ENSOMEG00000008200	thoc1	94	47.943	Oryzias_melastigma
ENSCSAVG00000010649	-	99	45.541	ENSOGAG00000000470	THOC1	92	46.338	Otolemur_garnettii
ENSCSAVG00000010649	-	99	46.751	ENSOARG00000009238	THOC1	92	47.544	Ovis_aries
ENSCSAVG00000010649	-	99	46.910	ENSPPAG00000031812	THOC1	92	47.611	Pan_paniscus
ENSCSAVG00000010649	-	99	46.338	ENSPPRG00000023794	THOC1	91	49.401	Panthera_pardus
ENSCSAVG00000010649	-	99	46.338	ENSPTIG00000007469	THOC1	91	49.401	Panthera_tigris_altaica
ENSCSAVG00000010649	-	99	46.288	ENSPTRG00000009816	THOC1	93	47.077	Pan_troglodytes
ENSCSAVG00000010649	-	99	46.349	ENSPANG00000008665	THOC1	93	47.143	Papio_anubis
ENSCSAVG00000010649	-	99	46.984	ENSPKIG00000005906	thoc1	94	47.799	Paramormyrops_kingsleyae
ENSCSAVG00000010649	-	84	47.378	ENSPSIG00000007691	THOC1	96	48.037	Pelodiscus_sinensis
ENSCSAVG00000010649	-	99	46.805	ENSPMGG00000008279	thoc1	93	46.805	Periophthalmus_magnuspinnatus
ENSCSAVG00000010649	-	99	45.800	ENSPEMG00000021789	Thoc1	93	46.751	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010649	-	77	43.558	ENSPCIG00000026942	THOC1	96	44.082	Phascolarctos_cinereus
ENSCSAVG00000010649	-	100	48.341	ENSPFOG00000011673	thoc1	94	48.341	Poecilia_formosa
ENSCSAVG00000010649	-	100	47.943	ENSPLAG00000019648	thoc1	94	47.943	Poecilia_latipinna
ENSCSAVG00000010649	-	100	48.499	ENSPMEG00000007083	thoc1	94	48.499	Poecilia_mexicana
ENSCSAVG00000010649	-	100	47.943	ENSPREG00000006719	thoc1	94	47.943	Poecilia_reticulata
ENSCSAVG00000010649	-	73	49.351	ENSPPYG00000009049	-	91	49.351	Pongo_abelii
ENSCSAVG00000010649	-	99	42.468	ENSPCAG00000005320	THOC1	93	42.468	Procavia_capensis
ENSCSAVG00000010649	-	99	46.497	ENSPCOG00000009234	THOC1	93	47.293	Propithecus_coquereli
ENSCSAVG00000010649	-	99	45.701	ENSPVAG00000004007	THOC1	93	46.497	Pteropus_vampyrus
ENSCSAVG00000010649	-	100	47.310	ENSPNYG00000019152	thoc1	94	47.559	Pundamilia_nyererei
ENSCSAVG00000010649	-	99	47.950	ENSPNAG00000023390	thoc1	94	47.950	Pygocentrus_nattereri
ENSCSAVG00000010649	-	81	37.553	ENSRNOG00000015332	Thoc1	91	40.084	Rattus_norvegicus
ENSCSAVG00000010649	-	99	46.288	ENSRBIG00000033738	THOC1	93	47.077	Rhinopithecus_bieti
ENSCSAVG00000010649	-	99	46.815	ENSRROG00000044988	THOC1	92	49.701	Rhinopithecus_roxellana
ENSCSAVG00000010649	-	99	46.910	ENSSBOG00000016556	THOC1	92	47.702	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010649	-	99	46.975	ENSSHAG00000014829	THOC1	93	47.377	Sarcophilus_harrisii
ENSCSAVG00000010649	-	100	47.717	ENSSFOG00015021527	thoc1	94	47.874	Scleropages_formosus
ENSCSAVG00000010649	-	99	48.475	ENSSMAG00000018465	thoc1	94	48.882	Scophthalmus_maximus
ENSCSAVG00000010649	-	100	47.627	ENSSDUG00000016810	thoc1	94	47.785	Seriola_dumerili
ENSCSAVG00000010649	-	100	47.468	ENSSLDG00000015555	thoc1	94	47.627	Seriola_lalandi_dorsalis
ENSCSAVG00000010649	-	86	52.036	ENSSARG00000006910	THOC1	80	52.232	Sorex_araneus
ENSCSAVG00000010649	-	99	45.860	ENSSPUG00000007238	THOC1	93	46.423	Sphenodon_punctatus
ENSCSAVG00000010649	-	99	46.571	ENSSPAG00000018847	thoc1	93	46.825	Stegastes_partitus
ENSCSAVG00000010649	-	99	46.975	ENSSSCG00000025653	THOC1	87	47.861	Sus_scrofa
ENSCSAVG00000010649	-	99	46.593	ENSTGUG00000010204	THOC1	93	47.551	Taeniopygia_guttata
ENSCSAVG00000010649	-	100	47.310	ENSTRUG00000013518	thoc1	94	47.559	Takifugu_rubripes
ENSCSAVG00000010649	-	100	47.161	ENSTNIG00000008473	thoc1	94	47.410	Tetraodon_nigroviridis
ENSCSAVG00000010649	-	99	40.446	ENSTBEG00000016920	THOC1	93	41.242	Tupaia_belangeri
ENSCSAVG00000010649	-	99	42.631	ENSTTRG00000016664	THOC1	93	43.423	Tursiops_truncatus
ENSCSAVG00000010649	-	99	46.656	ENSUAMG00000002527	THOC1	94	47.452	Ursus_americanus
ENSCSAVG00000010649	-	99	46.593	ENSUMAG00000019693	THOC1	93	47.293	Ursus_maritimus
ENSCSAVG00000010649	-	55	62.838	ENSVPAG00000003726	-	51	62.838	Vicugna_pacos
ENSCSAVG00000010649	-	99	46.497	ENSVVUG00000004384	THOC1	93	47.293	Vulpes_vulpes
ENSCSAVG00000010649	-	100	46.530	ENSXETG00000003155	thoc1	91	46.530	Xenopus_tropicalis
ENSCSAVG00000010649	-	99	48.387	ENSXCOG00000016085	thoc1	88	48.548	Xiphophorus_couchianus
ENSCSAVG00000010649	-	100	47.943	ENSXMAG00000002353	thoc1	94	47.943	Xiphophorus_maculatus