EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010669 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 16790 bases
Position: chrreftig_48:1900821-1917610
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018139	THOC7	PF05615.13	3.9e-29	1	1
ENSCSAVP00000018140	THOC7	PF05615.13	4.5e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018337	-	789	-	ENSCSAVP00000018140	208 (aa)	-	H2ZKM4
ENSCSAVT00000018336	-	663	-	ENSCSAVP00000018139	199 (aa)	-	H2ZKM3

Gene Model

Click here to download ENSCSAVG00000010669's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010669's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010669	-	99	44.776	ENSG00000163634	THOC7	97	75.862	Homo_sapiens
ENSCSAVG00000010669	-	95	48.969	ENSAPOG00000009523	thoc7	96	48.969	Acanthochromis_polyacanthus
ENSCSAVG00000010669	-	98	45.960	ENSAMEG00000015287	THOC7	96	46.766	Ailuropoda_melanoleuca
ENSCSAVG00000010669	-	88	51.397	ENSACIG00000008742	thoc7	89	50.543	Amphilophus_citrinellus
ENSCSAVG00000010669	-	95	48.969	ENSAOCG00000006925	thoc7	96	48.969	Amphiprion_ocellaris
ENSCSAVG00000010669	-	94	49.215	ENSAPEG00000001653	thoc7	92	50.000	Amphiprion_percula
ENSCSAVG00000010669	-	93	50.265	ENSATEG00000018422	thoc7	93	50.265	Anabas_testudineus
ENSCSAVG00000010669	-	97	45.960	ENSAPLG00000003317	THOC7	98	45.960	Anas_platyrhynchos
ENSCSAVG00000010669	-	98	46.970	ENSACAG00000001152	THOC7	97	46.970	Anolis_carolinensis
ENSCSAVG00000010669	-	99	45.274	ENSANAG00000030433	THOC7	98	47.264	Aotus_nancymaae
ENSCSAVG00000010669	-	93	50.265	ENSACLG00000015413	thoc7	93	50.265	Astatotilapia_calliptera
ENSCSAVG00000010669	-	92	51.064	ENSAMXG00000014367	thoc7	93	50.265	Astyanax_mexicanus
ENSCSAVG00000010669	-	99	44.776	ENSBTAG00000032872	THOC7	98	46.569	Bos_taurus
ENSCSAVG00000010669	-	99	45.274	ENSCJAG00000034899	-	98	47.059	Callithrix_jacchus
ENSCSAVG00000010669	-	99	44.000	ENSCJAG00000022907	-	98	45.320	Callithrix_jacchus
ENSCSAVG00000010669	-	97	44.670	ENSCAFG00000006867	THOC7	98	47.938	Canis_familiaris
ENSCSAVG00000010669	-	99	44.776	ENSCAFG00020010785	THOC7	97	47.980	Canis_lupus_dingo
ENSCSAVG00000010669	-	98	44.949	ENSCHIG00000018603	THOC7	97	46.766	Capra_hircus
ENSCSAVG00000010669	-	99	44.279	ENSTSYG00000013055	THOC7	98	46.078	Carlito_syrichta
ENSCSAVG00000010669	-	98	40.102	ENSCAPG00000009089	THOC7	96	41.000	Cavia_aperea
ENSCSAVG00000010669	-	99	45.771	ENSCPOG00000007930	THOC7	99	46.569	Cavia_porcellus
ENSCSAVG00000010669	-	99	45.274	ENSCCAG00000001638	THOC7	98	47.264	Cebus_capucinus
ENSCSAVG00000010669	-	99	46.269	ENSCATG00000038732	THOC7	98	46.766	Cercocebus_atys
ENSCSAVG00000010669	-	97	45.178	ENSCLAG00000000664	THOC7	99	47.000	Chinchilla_lanigera
ENSCSAVG00000010669	-	99	46.269	ENSCSAG00000011986	THOC7	98	46.569	Chlorocebus_sabaeus
ENSCSAVG00000010669	-	78	33.758	ENSCHOG00000012170	THOC7	98	35.625	Choloepus_hoffmanni
ENSCSAVG00000010669	-	75	40.667	ENSCPBG00000026834	THOC7	99	40.667	Chrysemys_picta_bellii
ENSCSAVG00000010669	-	100	80.392	ENSCING00000015312	-	100	80.095	Ciona_intestinalis
ENSCSAVG00000010669	-	98	44.949	ENSCANG00000028301	THOC7	99	46.500	Colobus_angolensis_palliatus
ENSCSAVG00000010669	-	99	45.274	ENSCGRG00001014815	Thoc7	99	46.078	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010669	-	98	45.455	ENSCGRG00000014860	Thoc7	100	46.269	Cricetulus_griseus_crigri
ENSCSAVG00000010669	-	92	48.649	ENSCSEG00000005643	thoc7	94	49.733	Cynoglossus_semilaevis
ENSCSAVG00000010669	-	97	45.854	ENSCVAG00000008059	thoc7	97	45.854	Cyprinodon_variegatus
ENSCSAVG00000010669	-	96	51.795	ENSDARG00000015394	thoc7	95	52.332	Danio_rerio
ENSCSAVG00000010669	-	83	32.544	ENSDNOG00000047257	-	91	31.282	Dasypus_novemcinctus
ENSCSAVG00000010669	-	99	45.771	ENSDNOG00000005917	-	98	47.059	Dasypus_novemcinctus
ENSCSAVG00000010669	-	86	47.701	ENSDORG00000009225	-	91	47.701	Dipodomys_ordii
ENSCSAVG00000010669	-	94	45.263	ENSDORG00000028787	-	98	46.842	Dipodomys_ordii
ENSCSAVG00000010669	-	88	35.028	FBgn0035110	thoc7	67	33.508	Drosophila_melanogaster
ENSCSAVG00000010669	-	97	39.594	ENSETEG00000015076	THOC7	100	41.500	Echinops_telfairi
ENSCSAVG00000010669	-	98	44.500	ENSEBUG00000006746	thoc7	96	43.689	Eptatretus_burgeri
ENSCSAVG00000010669	-	97	44.670	ENSEASG00005001507	THOC7	98	46.500	Equus_asinus_asinus
ENSCSAVG00000010669	-	99	44.776	ENSECAG00000000497	THOC7	98	46.569	Equus_caballus
ENSCSAVG00000010669	-	86	48.276	ENSEEUG00000015161	THOC7	93	47.727	Erinaceus_europaeus
ENSCSAVG00000010669	-	96	49.490	ENSELUG00000007905	thoc7	97	49.490	Esox_lucius
ENSCSAVG00000010669	-	99	44.279	ENSFCAG00000023008	THOC7	98	47.739	Felis_catus
ENSCSAVG00000010669	-	96	46.907	ENSFALG00000013245	THOC7	94	49.206	Ficedula_albicollis
ENSCSAVG00000010669	-	97	45.685	ENSFDAG00000016387	THOC7	100	47.000	Fukomys_damarensis
ENSCSAVG00000010669	-	93	48.677	ENSFHEG00000004406	thoc7	93	48.677	Fundulus_heteroclitus
ENSCSAVG00000010669	-	86	51.136	ENSGMOG00000009111	thoc7	94	51.099	Gadus_morhua
ENSCSAVG00000010669	-	98	46.465	ENSGALG00000007299	THOC7	98	46.231	Gallus_gallus
ENSCSAVG00000010669	-	99	46.078	ENSGACG00000009218	thoc7	96	45.411	Gasterosteus_aculeatus
ENSCSAVG00000010669	-	98	46.231	ENSGAGG00000008038	THOC7	98	46.231	Gopherus_agassizii
ENSCSAVG00000010669	-	98	44.949	ENSGGOG00000024282	THOC7	99	46.500	Gorilla_gorilla
ENSCSAVG00000010669	-	95	48.454	ENSHBUG00000004070	thoc7	96	48.454	Haplochromis_burtoni
ENSCSAVG00000010669	-	98	37.563	ENSHGLG00000015921	-	96	37.688	Heterocephalus_glaber_female
ENSCSAVG00000010669	-	99	45.771	ENSHGLG00000002165	THOC7	99	47.059	Heterocephalus_glaber_female
ENSCSAVG00000010669	-	99	36.000	ENSHGLG00000003232	-	99	36.453	Heterocephalus_glaber_female
ENSCSAVG00000010669	-	97	45.685	ENSHGLG00100007183	-	100	47.000	Heterocephalus_glaber_male
ENSCSAVG00000010669	-	98	37.563	ENSHGLG00100017070	-	96	37.688	Heterocephalus_glaber_male
ENSCSAVG00000010669	-	99	36.000	ENSHGLG00100018265	-	99	36.453	Heterocephalus_glaber_male
ENSCSAVG00000010669	-	93	49.206	ENSHCOG00000013910	thoc7	93	49.206	Hippocampus_comes
ENSCSAVG00000010669	-	64	45.736	ENSHCOG00000014078	thoc7	91	45.588	Hippocampus_comes
ENSCSAVG00000010669	-	93	50.526	ENSIPUG00000023494	thoc7	93	50.526	Ictalurus_punctatus
ENSCSAVG00000010669	-	98	44.949	ENSSTOG00000012552	THOC7	98	46.766	Ictidomys_tridecemlineatus
ENSCSAVG00000010669	-	87	38.286	ENSJJAG00000018503	-	88	37.912	Jaculus_jaculus
ENSCSAVG00000010669	-	97	44.162	ENSJJAG00000016662	-	99	45.500	Jaculus_jaculus
ENSCSAVG00000010669	-	96	48.469	ENSKMAG00000009670	thoc7	97	48.469	Kryptolebias_marmoratus
ENSCSAVG00000010669	-	93	48.148	ENSLBEG00000025612	thoc7	93	48.148	Labrus_bergylta
ENSCSAVG00000010669	-	96	45.500	ENSLACG00000003527	THOC7	98	47.000	Latimeria_chalumnae
ENSCSAVG00000010669	-	96	47.692	ENSLOCG00000010342	thoc7	95	47.692	Lepisosteus_oculatus
ENSCSAVG00000010669	-	98	44.949	ENSLAFG00000001987	THOC7	96	46.766	Loxodonta_africana
ENSCSAVG00000010669	-	99	46.269	ENSMFAG00000032653	THOC7	98	46.766	Macaca_fascicularis
ENSCSAVG00000010669	-	98	46.465	ENSMMUG00000012783	THOC7	98	46.766	Macaca_mulatta
ENSCSAVG00000010669	-	99	46.269	ENSMNEG00000035012	THOC7	98	46.766	Macaca_nemestrina
ENSCSAVG00000010669	-	98	46.465	ENSMLEG00000041263	THOC7	99	46.500	Mandrillus_leucophaeus
ENSCSAVG00000010669	-	88	50.838	ENSMAMG00000019803	thoc7	97	50.838	Mastacembelus_armatus
ENSCSAVG00000010669	-	93	50.265	ENSMZEG00005011996	thoc7	93	50.265	Maylandia_zebra
ENSCSAVG00000010669	-	77	40.764	ENSMGAG00000009059	THOC7	98	40.764	Meleagris_gallopavo
ENSCSAVG00000010669	-	97	45.685	ENSMAUG00000002228	Thoc7	100	46.000	Mesocricetus_auratus
ENSCSAVG00000010669	-	99	44.279	ENSMICG00000045229	THOC7	96	47.264	Microcebus_murinus
ENSCSAVG00000010669	-	98	44.724	ENSMOCG00000019446	Thoc7	98	46.734	Microtus_ochrogaster
ENSCSAVG00000010669	-	88	50.556	ENSMMOG00000000777	thoc7	98	50.549	Mola_mola
ENSCSAVG00000010669	-	93	47.938	ENSMODG00000003009	THOC7	90	50.000	Monodelphis_domestica
ENSCSAVG00000010669	-	99	44.776	MGP_CAROLIEiJ_G0018957	Thoc7	99	46.078	Mus_caroli
ENSCSAVG00000010669	-	99	45.274	ENSMUSG00000053453	Thoc7	98	47.399	Mus_musculus
ENSCSAVG00000010669	-	99	45.771	MGP_PahariEiJ_G0029971	Thoc7	98	46.078	Mus_pahari
ENSCSAVG00000010669	-	99	45.274	MGP_SPRETEiJ_G0019833	Thoc7	99	46.078	Mus_spretus
ENSCSAVG00000010669	-	98	39.698	ENSMPUG00000016928	THOC7	98	40.594	Mustela_putorius_furo
ENSCSAVG00000010669	-	98	44.949	ENSMLUG00000012060	-	98	47.264	Myotis_lucifugus
ENSCSAVG00000010669	-	94	43.367	ENSMLUG00000003510	-	97	45.128	Myotis_lucifugus
ENSCSAVG00000010669	-	93	41.711	ENSNGAG00000010425	-	95	41.711	Nannospalax_galili
ENSCSAVG00000010669	-	68	36.765	ENSNGAG00000001946	-	86	33.824	Nannospalax_galili
ENSCSAVG00000010669	-	99	45.000	ENSNGAG00000022918	-	98	46.305	Nannospalax_galili
ENSCSAVG00000010669	-	95	48.454	ENSNBRG00000020675	thoc7	96	48.454	Neolamprologus_brichardi
ENSCSAVG00000010669	-	99	44.776	ENSNLEG00000011760	THOC7	98	46.569	Nomascus_leucogenys
ENSCSAVG00000010669	-	58	38.462	ENSMEUG00000006342	THOC7	96	39.167	Notamacropus_eugenii
ENSCSAVG00000010669	-	97	45.685	ENSOPRG00000016403	THOC7	99	46.000	Ochotona_princeps
ENSCSAVG00000010669	-	98	45.455	ENSODEG00000000426	THOC7	100	46.500	Octodon_degus
ENSCSAVG00000010669	-	95	48.454	ENSONIG00000020361	thoc7	96	48.454	Oreochromis_niloticus
ENSCSAVG00000010669	-	64	43.796	ENSOANG00000015693	THOC7	99	42.763	Ornithorhynchus_anatinus
ENSCSAVG00000010669	-	98	43.939	ENSOCUG00000021860	-	96	46.269	Oryctolagus_cuniculus
ENSCSAVG00000010669	-	99	45.274	ENSOCUG00000009136	-	99	46.569	Oryctolagus_cuniculus
ENSCSAVG00000010669	-	95	48.454	ENSORLG00000008192	thoc7	86	48.454	Oryzias_latipes
ENSCSAVG00000010669	-	95	48.454	ENSORLG00020009776	thoc7	86	48.454	Oryzias_latipes_hni
ENSCSAVG00000010669	-	95	48.454	ENSORLG00015005198	thoc7	96	48.454	Oryzias_latipes_hsok
ENSCSAVG00000010669	-	96	47.500	ENSOMEG00000005739	thoc7	99	49.000	Oryzias_melastigma
ENSCSAVG00000010669	-	99	45.771	ENSOGAG00000024865	THOC7	98	46.569	Otolemur_garnettii
ENSCSAVG00000010669	-	98	44.949	ENSOARG00000011396	THOC7	99	46.766	Ovis_aries
ENSCSAVG00000010669	-	99	44.776	ENSPPAG00000044086	THOC7	98	46.569	Pan_paniscus
ENSCSAVG00000010669	-	97	44.162	ENSPPRG00000004022	THOC7	96	47.692	Panthera_pardus
ENSCSAVG00000010669	-	98	44.444	ENSPTIG00000010860	THOC7	99	42.667	Panthera_tigris_altaica
ENSCSAVG00000010669	-	99	44.776	ENSPTRG00000015076	THOC7	98	46.569	Pan_troglodytes
ENSCSAVG00000010669	-	99	46.269	ENSPANG00000009531	THOC7	98	46.766	Papio_anubis
ENSCSAVG00000010669	-	98	48.241	ENSPKIG00000023365	thoc7	98	47.959	Paramormyrops_kingsleyae
ENSCSAVG00000010669	-	75	40.667	ENSPSIG00000002810	THOC7	99	40.667	Pelodiscus_sinensis
ENSCSAVG00000010669	-	98	46.500	ENSPMGG00000001140	thoc7	97	46.500	Periophthalmus_magnuspinnatus
ENSCSAVG00000010669	-	97	45.178	ENSPEMG00000000620	Thoc7	100	46.000	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010669	-	93	47.917	ENSPMAG00000001319	thoc7	92	49.474	Petromyzon_marinus
ENSCSAVG00000010669	-	99	45.274	ENSPCIG00000012736	THOC7	96	49.231	Phascolarctos_cinereus
ENSCSAVG00000010669	-	95	47.423	ENSPFOG00000010233	thoc7	96	47.423	Poecilia_formosa
ENSCSAVG00000010669	-	95	47.423	ENSPLAG00000002693	thoc7	96	47.423	Poecilia_latipinna
ENSCSAVG00000010669	-	95	46.907	ENSPMEG00000023493	thoc7	96	46.907	Poecilia_mexicana
ENSCSAVG00000010669	-	95	46.907	ENSPREG00000018772	thoc7	96	46.907	Poecilia_reticulata
ENSCSAVG00000010669	-	98	44.949	ENSPPYG00000013746	THOC7	89	48.469	Pongo_abelii
ENSCSAVG00000010669	-	63	49.612	ENSPCAG00000006143	THOC7	99	49.612	Procavia_capensis
ENSCSAVG00000010669	-	99	45.771	ENSPCOG00000011923	-	98	46.377	Propithecus_coquereli
ENSCSAVG00000010669	-	99	45.771	ENSPCOG00000022000	-	98	47.264	Propithecus_coquereli
ENSCSAVG00000010669	-	97	45.408	ENSPVAG00000012310	THOC7	96	48.187	Pteropus_vampyrus
ENSCSAVG00000010669	-	95	48.454	ENSPNYG00000001260	thoc7	96	48.454	Pundamilia_nyererei
ENSCSAVG00000010669	-	92	50.532	ENSPNAG00000003038	thoc7	93	49.735	Pygocentrus_nattereri
ENSCSAVG00000010669	-	99	44.776	ENSRNOG00000007701	Thoc7	99	46.078	Rattus_norvegicus
ENSCSAVG00000010669	-	96	41.667	ENSRBIG00000033497	THOC7	97	41.667	Rhinopithecus_bieti
ENSCSAVG00000010669	-	99	44.776	ENSRROG00000008884	THOC7	98	46.766	Rhinopithecus_roxellana
ENSCSAVG00000010669	-	99	44.776	ENSSBOG00000021884	THOC7	98	46.569	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010669	-	99	45.000	ENSSHAG00000011615	THOC7	94	49.479	Sarcophilus_harrisii
ENSCSAVG00000010669	-	96	48.718	ENSSFOG00015018204	thoc7	97	48.718	Scleropages_formosus
ENSCSAVG00000010669	-	93	50.802	ENSSMAG00000010488	thoc7	93	50.802	Scophthalmus_maximus
ENSCSAVG00000010669	-	96	48.205	ENSSDUG00000022145	thoc7	94	48.205	Seriola_dumerili
ENSCSAVG00000010669	-	93	50.265	ENSSLDG00000013770	thoc7	93	50.265	Seriola_lalandi_dorsalis
ENSCSAVG00000010669	-	97	44.670	ENSSARG00000013894	-	99	47.000	Sorex_araneus
ENSCSAVG00000010669	-	97	44.670	ENSSARG00000014279	-	99	47.000	Sorex_araneus
ENSCSAVG00000010669	-	98	45.960	ENSSPUG00000011505	THOC7	99	45.960	Sphenodon_punctatus
ENSCSAVG00000010669	-	93	49.735	ENSSPAG00000001047	thoc7	96	48.438	Stegastes_partitus
ENSCSAVG00000010669	-	99	44.776	ENSSSCG00000011491	THOC7	98	47.059	Sus_scrofa
ENSCSAVG00000010669	-	96	45.408	ENSTGUG00000009431	THOC7	95	47.423	Taeniopygia_guttata
ENSCSAVG00000010669	-	96	49.490	ENSTRUG00000025690	thoc7	97	49.490	Takifugu_rubripes
ENSCSAVG00000010669	-	96	48.980	ENSTNIG00000006681	thoc7	97	48.980	Tetraodon_nigroviridis
ENSCSAVG00000010669	-	97	39.594	ENSTBEG00000003371	-	99	40.704	Tupaia_belangeri
ENSCSAVG00000010669	-	63	51.562	ENSTBEG00000007069	-	65	51.562	Tupaia_belangeri
ENSCSAVG00000010669	-	77	38.065	ENSTTRG00000007980	-	99	38.608	Tursiops_truncatus
ENSCSAVG00000010669	-	98	44.949	ENSTTRG00000013618	-	96	47.264	Tursiops_truncatus
ENSCSAVG00000010669	-	99	46.766	ENSUAMG00000002790	-	98	46.766	Ursus_americanus
ENSCSAVG00000010669	-	94	39.691	ENSUMAG00000011864	-	96	39.691	Ursus_maritimus
ENSCSAVG00000010669	-	76	40.789	ENSUMAG00000023513	-	99	40.789	Ursus_maritimus
ENSCSAVG00000010669	-	98	44.949	ENSVPAG00000010083	THOC7	96	47.264	Vicugna_pacos
ENSCSAVG00000010669	-	76	38.816	ENSVVUG00000014787	THOC7	99	42.667	Vulpes_vulpes
ENSCSAVG00000010669	-	90	43.646	ENSXETG00000006539	thoc7	94	43.617	Xenopus_tropicalis
ENSCSAVG00000010669	-	95	47.423	ENSXMAG00000002014	thoc7	96	47.423	Xiphophorus_maculatus