EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010672 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 3313 bases
Position: chrreftig_9:2212199-2215511
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018143	Brix	PF04427.18	2.2e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018340	-	962	-	ENSCSAVP00000018143	296 (aa)	-	H2ZKM7

Gene Model

Click here to download ENSCSAVG00000010672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010672	-	97	59.233	ENSG00000197498	RPF2	95	62.255	Homo_sapiens
ENSCSAVG00000010672	-	96	59.859	ENSAPOG00000005714	rpf2	92	59.859	Acanthochromis_polyacanthus
ENSCSAVG00000010672	-	97	57.840	ENSAMEG00000015753	RPF2	94	57.840	Ailuropoda_melanoleuca
ENSCSAVG00000010672	-	96	59.507	ENSAOCG00000005173	rpf2	92	59.507	Amphiprion_ocellaris
ENSCSAVG00000010672	-	96	59.507	ENSAPEG00000004003	rpf2	92	59.507	Amphiprion_percula
ENSCSAVG00000010672	-	96	56.294	ENSATEG00000012818	rpf2	93	56.294	Anabas_testudineus
ENSCSAVG00000010672	-	90	60.674	ENSAPLG00000008812	RPF2	98	60.674	Anas_platyrhynchos
ENSCSAVG00000010672	-	98	57.931	ENSACAG00000011270	RPF2	94	57.931	Anolis_carolinensis
ENSCSAVG00000010672	-	97	57.143	ENSANAG00000026549	-	94	57.143	Aotus_nancymaae
ENSCSAVG00000010672	-	97	55.052	ENSANAG00000034834	-	94	55.052	Aotus_nancymaae
ENSCSAVG00000010672	-	97	46.690	ENSANAG00000033736	-	93	47.387	Aotus_nancymaae
ENSCSAVG00000010672	-	98	47.945	ENSANAG00000025459	-	95	46.494	Aotus_nancymaae
ENSCSAVG00000010672	-	99	42.373	ENSANAG00000021067	-	95	41.695	Aotus_nancymaae
ENSCSAVG00000010672	-	95	58.007	ENSAMXG00000035201	rpf2	91	58.007	Astyanax_mexicanus
ENSCSAVG00000010672	-	98	58.621	ENSBTAG00000016584	RPF2	94	58.824	Bos_taurus
ENSCSAVG00000010672	-	95	43.816	WBGene00021830	Y54E10A.10	95	43.816	Caenorhabditis_elegans
ENSCSAVG00000010672	-	97	59.233	ENSCJAG00000038330	RPF2	93	62.389	Callithrix_jacchus
ENSCSAVG00000010672	-	97	58.188	ENSCAFG00000003918	RPF2	94	58.188	Canis_familiaris
ENSCSAVG00000010672	-	98	56.207	ENSCHIG00000022499	RPF2	95	56.207	Capra_hircus
ENSCSAVG00000010672	-	97	59.233	ENSTSYG00000013924	RPF2	94	59.233	Carlito_syrichta
ENSCSAVG00000010672	-	96	44.718	ENSCAPG00000014257	RPF2	92	44.014	Cavia_aperea
ENSCSAVG00000010672	-	97	58.188	ENSCPOG00000006797	RPF2	94	58.188	Cavia_porcellus
ENSCSAVG00000010672	-	97	58.885	ENSCCAG00000030864	-	94	58.885	Cebus_capucinus
ENSCSAVG00000010672	-	89	52.852	ENSCCAG00000028906	-	95	52.212	Cebus_capucinus
ENSCSAVG00000010672	-	97	45.172	ENSCCAG00000028553	-	92	44.483	Cebus_capucinus
ENSCSAVG00000010672	-	97	57.491	ENSCCAG00000030365	-	94	57.491	Cebus_capucinus
ENSCSAVG00000010672	-	89	47.940	ENSCATG00000029725	-	94	60.465	Cercocebus_atys
ENSCSAVG00000010672	-	85	50.787	ENSCATG00000034352	-	81	57.619	Cercocebus_atys
ENSCSAVG00000010672	-	94	46.316	ENSCLAG00000010874	-	94	45.263	Chinchilla_lanigera
ENSCSAVG00000010672	-	97	58.537	ENSCLAG00000010393	-	94	58.537	Chinchilla_lanigera
ENSCSAVG00000010672	-	87	43.580	ENSCLAG00000013252	-	94	43.580	Chinchilla_lanigera
ENSCSAVG00000010672	-	97	56.446	ENSCHOG00000005865	RPF2	93	56.446	Choloepus_hoffmanni
ENSCSAVG00000010672	-	97	57.840	ENSCPBG00000006504	RPF2	93	57.840	Chrysemys_picta_bellii
ENSCSAVG00000010672	-	97	83.972	ENSCING00000008090	-	94	83.162	Ciona_intestinalis
ENSCSAVG00000010672	-	97	59.582	ENSCANG00000030665	RPF2	94	59.582	Colobus_angolensis_palliatus
ENSCSAVG00000010672	-	96	59.091	ENSCGRG00001007331	-	93	59.091	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010672	-	96	48.601	ENSCGRG00001005262	-	91	48.601	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010672	-	95	59.929	ENSCGRG00000006083	Rpf2	92	59.929	Cricetulus_griseus_crigri
ENSCSAVG00000010672	-	97	57.627	ENSCSEG00000015725	rpf2	97	57.627	Cynoglossus_semilaevis
ENSCSAVG00000010672	-	96	59.507	ENSCVAG00000001072	rpf2	93	59.507	Cyprinodon_variegatus
ENSCSAVG00000010672	-	98	59.122	ENSDARG00000043960	rpf2	96	59.122	Danio_rerio
ENSCSAVG00000010672	-	65	57.592	ENSDNOG00000039270	RPF2	93	57.592	Dasypus_novemcinctus
ENSCSAVG00000010672	-	57	63.043	ENSDORG00000026915	Rpf2	97	63.043	Dipodomys_ordii
ENSCSAVG00000010672	-	96	44.251	FBgn0038585	Non3	92	43.878	Drosophila_melanogaster
ENSCSAVG00000010672	-	97	55.052	ENSEBUG00000003640	rpf2	87	55.052	Eptatretus_burgeri
ENSCSAVG00000010672	-	97	57.143	ENSEASG00005006927	-	94	57.143	Equus_asinus_asinus
ENSCSAVG00000010672	-	97	58.537	ENSECAG00000017121	RPF2	94	58.537	Equus_caballus
ENSCSAVG00000010672	-	95	46.643	ENSEEUG00000006169	RPF2	95	46.643	Erinaceus_europaeus
ENSCSAVG00000010672	-	95	59.717	ENSELUG00000018518	rpf2	93	59.717	Esox_lucius
ENSCSAVG00000010672	-	97	58.537	ENSFCAG00000001527	RPF2	94	58.537	Felis_catus
ENSCSAVG00000010672	-	98	58.276	ENSFALG00000010816	RPF2	94	58.478	Ficedula_albicollis
ENSCSAVG00000010672	-	89	48.864	ENSFDAG00000016721	-	98	48.864	Fukomys_damarensis
ENSCSAVG00000010672	-	97	58.537	ENSFDAG00000005811	-	94	58.537	Fukomys_damarensis
ENSCSAVG00000010672	-	96	58.451	ENSFHEG00000011243	rpf2	92	58.451	Fundulus_heteroclitus
ENSCSAVG00000010672	-	97	50.338	ENSGMOG00000002521	rpf2	99	50.338	Gadus_morhua
ENSCSAVG00000010672	-	98	59.310	ENSGALG00000037087	RPF2	95	59.310	Gallus_gallus
ENSCSAVG00000010672	-	96	58.451	ENSGAFG00000009537	rpf2	93	58.451	Gambusia_affinis
ENSCSAVG00000010672	-	99	57.718	ENSGACG00000006507	rpf2	97	57.718	Gasterosteus_aculeatus
ENSCSAVG00000010672	-	97	54.704	ENSGAGG00000016221	RPF2	93	54.704	Gopherus_agassizii
ENSCSAVG00000010672	-	97	48.432	ENSGGOG00000001469	RPF2	93	48.084	Gorilla_gorilla
ENSCSAVG00000010672	-	95	53.546	ENSGGOG00000024187	-	99	53.546	Gorilla_gorilla
ENSCSAVG00000010672	-	96	57.692	ENSHBUG00000021805	rpf2	93	57.692	Haplochromis_burtoni
ENSCSAVG00000010672	-	95	54.610	ENSHGLG00000012697	-	98	54.610	Heterocephalus_glaber_female
ENSCSAVG00000010672	-	99	51.020	ENSHGLG00000012500	-	78	51.020	Heterocephalus_glaber_female
ENSCSAVG00000010672	-	97	56.794	ENSHGLG00000001322	RPF2	94	56.794	Heterocephalus_glaber_female
ENSCSAVG00000010672	-	95	45.390	ENSHGLG00100002981	-	98	45.390	Heterocephalus_glaber_male
ENSCSAVG00000010672	-	87	46.512	ENSHGLG00100009310	-	94	48.062	Heterocephalus_glaber_male
ENSCSAVG00000010672	-	95	54.610	ENSHGLG00100000462	-	98	54.610	Heterocephalus_glaber_male
ENSCSAVG00000010672	-	99	50.680	ENSHGLG00100012473	-	95	50.680	Heterocephalus_glaber_male
ENSCSAVG00000010672	-	97	56.794	ENSHGLG00100012131	RPF2	94	56.794	Heterocephalus_glaber_male
ENSCSAVG00000010672	-	96	58.099	ENSHCOG00000000225	rpf2	93	58.099	Hippocampus_comes
ENSCSAVG00000010672	-	95	52.817	ENSIPUG00000016288	rpf2	92	52.465	Ictalurus_punctatus
ENSCSAVG00000010672	-	97	46.503	ENSSTOG00000013114	RPF2	98	42.806	Ictidomys_tridecemlineatus
ENSCSAVG00000010672	-	96	55.634	ENSJJAG00000009092	Rpf2	98	53.047	Jaculus_jaculus
ENSCSAVG00000010672	-	95	59.859	ENSKMAG00000014609	rpf2	93	59.859	Kryptolebias_marmoratus
ENSCSAVG00000010672	-	95	58.719	ENSLBEG00000011907	rpf2	91	51.943	Labrus_bergylta
ENSCSAVG00000010672	-	97	59.655	ENSLACG00000003942	RPF2	94	59.655	Latimeria_chalumnae
ENSCSAVG00000010672	-	95	57.692	ENSLOCG00000016992	rpf2	93	57.692	Lepisosteus_oculatus
ENSCSAVG00000010672	-	97	58.188	ENSLAFG00000018219	RPF2	93	58.188	Loxodonta_africana
ENSCSAVG00000010672	-	89	46.992	ENSMFAG00000036119	-	98	46.992	Macaca_fascicularis
ENSCSAVG00000010672	-	97	59.582	ENSMFAG00000000417	RPF2	94	59.582	Macaca_fascicularis
ENSCSAVG00000010672	-	97	59.582	ENSMMUG00000021532	RPF2	95	62.745	Macaca_mulatta
ENSCSAVG00000010672	-	97	46.207	ENSMMUG00000042376	-	94	46.207	Macaca_mulatta
ENSCSAVG00000010672	-	97	49.129	ENSMNEG00000031683	RPF2	93	48.780	Macaca_nemestrina
ENSCSAVG00000010672	-	97	47.387	ENSMLEG00000042472	-	94	47.387	Mandrillus_leucophaeus
ENSCSAVG00000010672	-	97	57.986	ENSMAMG00000004267	rpf2	94	57.986	Mastacembelus_armatus
ENSCSAVG00000010672	-	96	57.692	ENSMZEG00005015632	rpf2	93	57.692	Maylandia_zebra
ENSCSAVG00000010672	-	97	59.233	ENSMGAG00000013429	RPF2	94	59.233	Meleagris_gallopavo
ENSCSAVG00000010672	-	62	59.843	ENSMAUG00000005049	Rpf2	99	59.843	Mesocricetus_auratus
ENSCSAVG00000010672	-	97	49.653	ENSMICG00000028979	-	94	49.653	Microcebus_murinus
ENSCSAVG00000010672	-	97	51.399	ENSMICG00000038169	-	93	51.399	Microcebus_murinus
ENSCSAVG00000010672	-	97	59.233	ENSMICG00000032086	-	94	59.233	Microcebus_murinus
ENSCSAVG00000010672	-	95	59.011	ENSMOCG00000005634	Rpf2	92	59.011	Microtus_ochrogaster
ENSCSAVG00000010672	-	96	51.930	ENSMMOG00000014844	rpf2	93	52.313	Mola_mola
ENSCSAVG00000010672	-	95	58.304	ENSMODG00000017919	RPF2	93	58.304	Monodelphis_domestica
ENSCSAVG00000010672	-	95	55.830	ENSMALG00000019046	rpf2	92	55.830	Monopterus_albus
ENSCSAVG00000010672	-	96	58.741	MGP_CAROLIEiJ_G0015254	Rpf2	97	57.407	Mus_caroli
ENSCSAVG00000010672	-	96	59.091	ENSMUSG00000038510	Rpf2	94	61.479	Mus_musculus
ENSCSAVG00000010672	-	96	58.741	MGP_PahariEiJ_G0030671	Rpf2	97	58.333	Mus_pahari
ENSCSAVG00000010672	-	96	59.091	MGP_SPRETEiJ_G0016063	Rpf2	97	58.333	Mus_spretus
ENSCSAVG00000010672	-	97	59.233	ENSMPUG00000010183	RPF2	82	59.233	Mustela_putorius_furo
ENSCSAVG00000010672	-	80	61.506	ENSMLUG00000005676	RPF2	94	61.506	Myotis_lucifugus
ENSCSAVG00000010672	-	96	58.392	ENSNGAG00000009701	Rpf2	93	58.392	Nannospalax_galili
ENSCSAVG00000010672	-	96	57.692	ENSNBRG00000011087	rpf2	93	57.692	Neolamprologus_brichardi
ENSCSAVG00000010672	-	88	56.154	ENSNLEG00000033597	-	85	56.154	Nomascus_leucogenys
ENSCSAVG00000010672	-	79	56.356	ENSNLEG00000011848	-	93	57.080	Nomascus_leucogenys
ENSCSAVG00000010672	-	97	58.537	ENSNLEG00000027819	RPF2	94	58.537	Nomascus_leucogenys
ENSCSAVG00000010672	-	94	45.683	ENSMEUG00000006421	RPF2	94	45.683	Notamacropus_eugenii
ENSCSAVG00000010672	-	97	53.310	ENSODEG00000019144	-	94	53.310	Octodon_degus
ENSCSAVG00000010672	-	97	51.220	ENSODEG00000006584	-	93	51.220	Octodon_degus
ENSCSAVG00000010672	-	95	58.657	ENSODEG00000013529	-	92	58.657	Octodon_degus
ENSCSAVG00000010672	-	87	50.000	ENSODEG00000006939	-	94	50.000	Octodon_degus
ENSCSAVG00000010672	-	93	46.931	ENSODEG00000003531	-	100	46.931	Octodon_degus
ENSCSAVG00000010672	-	97	47.569	ENSODEG00000002442	-	97	48.057	Octodon_degus
ENSCSAVG00000010672	-	96	56.993	ENSONIG00000011383	rpf2	93	56.993	Oreochromis_niloticus
ENSCSAVG00000010672	-	97	58.537	ENSOCUG00000016028	RPF2	94	58.537	Oryctolagus_cuniculus
ENSCSAVG00000010672	-	97	59.028	ENSORLG00000015183	rpf2	92	59.507	Oryzias_latipes
ENSCSAVG00000010672	-	96	59.155	ENSORLG00020008756	rpf2	91	57.092	Oryzias_latipes_hni
ENSCSAVG00000010672	-	97	59.028	ENSORLG00015003841	RPF2	92	59.507	Oryzias_latipes_hsok
ENSCSAVG00000010672	-	96	59.859	ENSOMEG00000011508	rpf2	92	59.859	Oryzias_melastigma
ENSCSAVG00000010672	-	97	58.537	ENSOGAG00000007438	RPF2	94	58.537	Otolemur_garnettii
ENSCSAVG00000010672	-	98	58.621	ENSOARG00000009886	-	94	58.824	Ovis_aries
ENSCSAVG00000010672	-	98	58.621	ENSOARG00000015548	-	94	58.824	Ovis_aries
ENSCSAVG00000010672	-	90	55.597	ENSPPAG00000032089	-	96	55.597	Pan_paniscus
ENSCSAVG00000010672	-	97	59.233	ENSPPAG00000035622	RPF2	94	59.233	Pan_paniscus
ENSCSAVG00000010672	-	97	50.347	ENSPPRG00000008363	-	94	50.347	Panthera_pardus
ENSCSAVG00000010672	-	97	58.885	ENSPPRG00000000320	-	94	58.885	Panthera_pardus
ENSCSAVG00000010672	-	97	58.885	ENSPTIG00000002060	RPF2	94	58.885	Panthera_tigris_altaica
ENSCSAVG00000010672	-	97	59.233	ENSPTRG00000018503	RPF2	94	59.233	Pan_troglodytes
ENSCSAVG00000010672	-	97	59.582	ENSPANG00000018834	RPF2	94	59.582	Papio_anubis
ENSCSAVG00000010672	-	95	59.011	ENSPKIG00000019506	rpf2	92	59.011	Paramormyrops_kingsleyae
ENSCSAVG00000010672	-	97	57.840	ENSPSIG00000014887	RPF2	93	57.840	Pelodiscus_sinensis
ENSCSAVG00000010672	-	94	53.405	ENSPEMG00000011413	Rpf2	98	53.405	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010672	-	97	57.143	ENSPCIG00000028172	RPF2	92	57.143	Phascolarctos_cinereus
ENSCSAVG00000010672	-	96	58.099	ENSPFOG00000003396	rpf2	93	58.099	Poecilia_formosa
ENSCSAVG00000010672	-	96	58.099	ENSPLAG00000001226	rpf2	93	58.099	Poecilia_latipinna
ENSCSAVG00000010672	-	96	58.099	ENSPMEG00000007781	rpf2	93	58.099	Poecilia_mexicana
ENSCSAVG00000010672	-	96	58.099	ENSPREG00000020525	rpf2	93	58.099	Poecilia_reticulata
ENSCSAVG00000010672	-	97	59.233	ENSPPYG00000016925	RPF2	94	59.233	Pongo_abelii
ENSCSAVG00000010672	-	66	61.538	ENSPCAG00000002562	RPF2	77	61.376	Procavia_capensis
ENSCSAVG00000010672	-	95	49.648	ENSPCOG00000012785	RPF2	92	49.648	Propithecus_coquereli
ENSCSAVG00000010672	-	80	61.925	ENSPVAG00000003446	RPF2	78	61.925	Pteropus_vampyrus
ENSCSAVG00000010672	-	96	60.211	ENSPNAG00000000082	rpf2	93	60.211	Pygocentrus_nattereri
ENSCSAVG00000010672	-	96	59.091	ENSRNOG00000000587	Rpf2	93	59.091	Rattus_norvegicus
ENSCSAVG00000010672	-	97	58.188	ENSRBIG00000038389	RPF2	94	58.188	Rhinopithecus_bieti
ENSCSAVG00000010672	-	80	53.942	ENSRROG00000028992	-	80	53.942	Rhinopithecus_roxellana
ENSCSAVG00000010672	-	89	53.759	ENSRROG00000039510	-	98	53.759	Rhinopithecus_roxellana
ENSCSAVG00000010672	-	82	55.918	ENSRROG00000036685	-	89	56.652	Rhinopithecus_roxellana
ENSCSAVG00000010672	-	97	59.582	ENSRROG00000036457	RPF2	94	59.582	Rhinopithecus_roxellana
ENSCSAVG00000010672	-	95	37.627	YKR081C	-	86	37.627	Saccharomyces_cerevisiae
ENSCSAVG00000010672	-	97	47.751	ENSSBOG00000025434	-	99	46.021	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010672	-	87	54.651	ENSSBOG00000022486	-	88	54.651	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010672	-	99	41.946	ENSSBOG00000034420	-	96	40.268	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010672	-	82	45.267	ENSSBOG00000029182	-	88	45.923	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010672	-	83	43.952	ENSSBOG00000030264	-	84	44.206	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010672	-	97	57.143	ENSSHAG00000002212	RPF2	93	57.143	Sarcophilus_harrisii
ENSCSAVG00000010672	-	96	57.042	ENSSFOG00015020916	rpf2	93	57.042	Scleropages_formosus
ENSCSAVG00000010672	-	95	59.011	ENSSMAG00000017499	rpf2	92	59.011	Scophthalmus_maximus
ENSCSAVG00000010672	-	97	55.749	ENSSDUG00000010383	rpf2	90	56.184	Seriola_dumerili
ENSCSAVG00000010672	-	96	59.507	ENSSLDG00000022111	rpf2	92	59.507	Seriola_lalandi_dorsalis
ENSCSAVG00000010672	-	97	42.657	ENSSARG00000012063	RPF2	94	42.657	Sorex_araneus
ENSCSAVG00000010672	-	96	57.042	ENSSPUG00000005108	RPF2	92	57.042	Sphenodon_punctatus
ENSCSAVG00000010672	-	96	59.859	ENSSPAG00000008035	rpf2	92	59.859	Stegastes_partitus
ENSCSAVG00000010672	-	97	57.491	ENSSSCG00000004394	RPF2	94	57.491	Sus_scrofa
ENSCSAVG00000010672	-	98	57.586	ENSTGUG00000012034	RPF2	94	57.785	Taeniopygia_guttata
ENSCSAVG00000010672	-	95	58.304	ENSTRUG00000018264	rpf2	92	58.304	Takifugu_rubripes
ENSCSAVG00000010672	-	96	54.386	ENSTNIG00000002749	rpf2	93	54.386	Tetraodon_nigroviridis
ENSCSAVG00000010672	-	83	56.680	ENSTBEG00000017151	RPF2	81	56.680	Tupaia_belangeri
ENSCSAVG00000010672	-	98	59.310	ENSTTRG00000012357	RPF2	94	59.516	Tursiops_truncatus
ENSCSAVG00000010672	-	97	59.233	ENSUAMG00000013497	RPF2	94	59.233	Ursus_americanus
ENSCSAVG00000010672	-	97	58.885	ENSUMAG00000025488	RPF2	94	58.885	Ursus_maritimus
ENSCSAVG00000010672	-	98	57.241	ENSVPAG00000009562	RPF2	95	57.439	Vicugna_pacos
ENSCSAVG00000010672	-	90	51.311	ENSVVUG00000021231	-	94	51.311	Vulpes_vulpes
ENSCSAVG00000010672	-	97	52.265	ENSVVUG00000006593	-	93	52.265	Vulpes_vulpes
ENSCSAVG00000010672	-	96	55.944	ENSXETG00000021335	rpf2	93	55.944	Xenopus_tropicalis
ENSCSAVG00000010672	-	96	55.634	ENSXCOG00000001590	rpf2	93	55.634	Xiphophorus_couchianus
ENSCSAVG00000010672	-	96	51.761	ENSXMAG00000021706	rpf2	92	51.761	Xiphophorus_maculatus