EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000010678 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
7442 bases
Position
chrreftig_48:1992214-1999655
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000018150TruDPF01142.181.1e-6611
ENSCSAVP00000018149TruDPF01142.184.6e-5811
ENSCSAVP00000018151TruDPF01142.181.1e-0611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000018348-907-ENSCSAVP00000018151142 (aa)-H2ZKN5
ENSCSAVT00000018346-1338-ENSCSAVP00000018149433 (aa)-H2ZKN3
ENSCSAVT00000018347-1967-ENSCSAVP00000018150562 (aa)-H2ZKN4
Gene Model
Click here to download ENSCSAVG00000010678's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010678's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000010678-8431.092ENSG00000129317PUS7L9532.308Homo_sapiens
ENSCSAVG00000010678-9940.675ENSG00000091127PUS78340.675Homo_sapiens
ENSCSAVG00000010678-9941.844ENSAPOG00000008645pus78841.579Acanthochromis_polyacanthus
ENSCSAVG00000010678-9940.780ENSAMEG00000013229PUS78140.780Ailuropoda_melanoleuca
ENSCSAVG00000010678-9940.675ENSACIG00000019006pus78740.675Amphilophus_citrinellus
ENSCSAVG00000010678-9941.844ENSAOCG00000013110pus78741.844Amphiprion_ocellaris
ENSCSAVG00000010678-9941.844ENSAPEG00000007260pus78841.579Amphiprion_percula
ENSCSAVG00000010678-9941.844ENSATEG00000019185pus78741.844Anabas_testudineus
ENSCSAVG00000010678-9940.107ENSAPLG00000005024PUS78340.107Anas_platyrhynchos
ENSCSAVG00000010678-8430.081ENSAPLG00000012601PUS7L9830.115Anas_platyrhynchos
ENSCSAVG00000010678-9940.036ENSACAG00000014447PUS78440.036Anolis_carolinensis
ENSCSAVG00000010678-9941.385ENSANAG00000035204PUS78341.385Aotus_nancymaae
ENSCSAVG00000010678-9940.569ENSACLG00000026503pus78840.747Astatotilapia_calliptera
ENSCSAVG00000010678-9941.030ENSAMXG00000014361pus78741.030Astyanax_mexicanus
ENSCSAVG00000010678-9940.675ENSBTAG00000007743PUS78340.675Bos_taurus
ENSCSAVG00000010678-8831.034ENSBTAG00000004718PUS7L7231.034Bos_taurus
ENSCSAVG00000010678-9730.420WBGene00007101B0024.119330.420Caenorhabditis_elegans
ENSCSAVG00000010678-8432.773ENSCJAG00000013448PUS7L7030.273Callithrix_jacchus
ENSCSAVG00000010678-9941.385ENSCJAG00000016081PUS78341.385Callithrix_jacchus
ENSCSAVG00000010678-9941.030ENSCAFG00000004035PUS77241.030Canis_familiaris
ENSCSAVG00000010678-8830.171ENSCAFG00000009729PUS7L7230.171Canis_familiaris
ENSCSAVG00000010678-8830.171ENSCAFG00020010508PUS7L7030.171Canis_lupus_dingo
ENSCSAVG00000010678-9940.853ENSCHIG00000021531PUS78340.853Capra_hircus
ENSCSAVG00000010678-8830.710ENSCHIG00000011359PUS7L7030.920Capra_hircus
ENSCSAVG00000010678-9940.598ENSTSYG00000007882PUS78340.598Carlito_syrichta
ENSCSAVG00000010678-8432.773ENSTSYG00000000167PUS7L6631.250Carlito_syrichta
ENSCSAVG00000010678-9046.875ENSCAPG00000012674PUS77547.264Cavia_aperea
ENSCSAVG00000010678-8430.252ENSCPOG00000001769PUS7L6631.185Cavia_porcellus
ENSCSAVG00000010678-9940.853ENSCPOG00000004705PUS78340.853Cavia_porcellus
ENSCSAVG00000010678-9938.721ENSCCAG00000031558PUS78238.721Cebus_capucinus
ENSCSAVG00000010678-9941.030ENSCATG00000044868PUS77741.030Cercocebus_atys
ENSCSAVG00000010678-8830.228ENSCATG00000021116PUS7L8230.228Cercocebus_atys
ENSCSAVG00000010678-8830.460ENSCLAG00000002416PUS7L7230.460Chinchilla_lanigera
ENSCSAVG00000010678-9940.853ENSCLAG00000005275PUS78440.853Chinchilla_lanigera
ENSCSAVG00000010678-9941.030ENSCSAG00000011530PUS78141.030Chlorocebus_sabaeus
ENSCSAVG00000010678-9037.500ENSCHOG00000011068PUS76243.077Choloepus_hoffmanni
ENSCSAVG00000010678-8431.933ENSCHOG00000000787PUS7L9531.690Choloepus_hoffmanni
ENSCSAVG00000010678-9939.929ENSCPBG00000001198PUS77740.142Chrysemys_picta_bellii
ENSCSAVG00000010678-10067.311ENSCING00000008194-9467.311Ciona_intestinalis
ENSCSAVG00000010678-6430.660ENSCING00000007277-9530.660Ciona_intestinalis
ENSCSAVG00000010678-9941.030ENSCANG00000041689PUS78341.030Colobus_angolensis_palliatus
ENSCSAVG00000010678-9940.853ENSCGRG00001011955Pus78340.853Cricetulus_griseus_chok1gshd
ENSCSAVG00000010678-9940.853ENSCGRG00000000387Pus78340.853Cricetulus_griseus_crigri
ENSCSAVG00000010678-9941.416ENSCSEG00000009505pus78841.416Cynoglossus_semilaevis
ENSCSAVG00000010678-9940.463ENSCVAG00000007338pus78740.463Cyprinodon_variegatus
ENSCSAVG00000010678-8030.890ENSDARG00000069780pus7l9630.047Danio_rerio
ENSCSAVG00000010678-9939.469ENSDARG00000031774pus79835.081Danio_rerio
ENSCSAVG00000010678-9940.675ENSDNOG00000007868PUS78340.463Dasypus_novemcinctus
ENSCSAVG00000010678-9940.820ENSDORG00000014545Pus78340.820Dipodomys_ordii
ENSCSAVG00000010678-9932.353FBgn0035901CG67458732.353Drosophila_melanogaster
ENSCSAVG00000010678-9938.503ENSETEG00000009791PUS78338.503Echinops_telfairi
ENSCSAVG00000010678-9938.163ENSEBUG00000006182pus77338.163Eptatretus_burgeri
ENSCSAVG00000010678-9940.925ENSEASG00005017408PUS78340.925Equus_asinus_asinus
ENSCSAVG00000010678-9941.281ENSECAG00000011144PUS78341.281Equus_caballus
ENSCSAVG00000010678-8947.887ENSEEUG00000014173PUS77547.887Erinaceus_europaeus
ENSCSAVG00000010678-9937.790ENSELUG00000008521pus78537.790Esox_lucius
ENSCSAVG00000010678-8830.228ENSFCAG00000005091PUS7L7230.228Felis_catus
ENSCSAVG00000010678-9941.208ENSFCAG00000019145PUS78341.208Felis_catus
ENSCSAVG00000010678-8433.613ENSFALG00000010205PUS7L9932.282Ficedula_albicollis
ENSCSAVG00000010678-9940.107ENSFALG00000010323PUS78540.107Ficedula_albicollis
ENSCSAVG00000010678-9941.281ENSFDAG00000016064PUS78441.281Fukomys_damarensis
ENSCSAVG00000010678-9941.135ENSFHEG00000018282pus78640.893Fundulus_heteroclitus
ENSCSAVG00000010678-9941.844ENSGMOG00000004874pus79541.844Gadus_morhua
ENSCSAVG00000010678-8630.528ENSGALG00000009577PUS7L7330.724Gallus_gallus
ENSCSAVG00000010678-9940.107ENSGALG00000008132PUS78440.107Gallus_gallus
ENSCSAVG00000010678-9940.569ENSGAFG00000002980pus78740.569Gambusia_affinis
ENSCSAVG00000010678-9941.312ENSGACG00000003840pus79541.312Gasterosteus_aculeatus
ENSCSAVG00000010678-9940.285ENSGAGG00000006756PUS78540.642Gopherus_agassizii
ENSCSAVG00000010678-9940.497ENSGGOG00000011898PUS78340.497Gorilla_gorilla
ENSCSAVG00000010678-9940.569ENSHBUG00000015448pus78840.246Haplochromis_burtoni
ENSCSAVG00000010678-9940.925ENSHGLG00000015697PUS78440.317Heterocephalus_glaber_female
ENSCSAVG00000010678-9940.925ENSHGLG00100011745PUS78440.317Heterocephalus_glaber_male
ENSCSAVG00000010678-9941.197ENSHCOG00000005361pus78841.197Hippocampus_comes
ENSCSAVG00000010678-8331.092ENSIPUG00000014589pus7l5330.214Ictalurus_punctatus
ENSCSAVG00000010678-9938.681ENSIPUG00000015465pus78438.681Ictalurus_punctatus
ENSCSAVG00000010678-9940.675ENSSTOG00000004974PUS78340.675Ictidomys_tridecemlineatus
ENSCSAVG00000010678-9937.833ENSJJAG00000019164Pus78237.833Jaculus_jaculus
ENSCSAVG00000010678-9940.636ENSKMAG00000013311pus78840.455Kryptolebias_marmoratus
ENSCSAVG00000010678-9939.719ENSLBEG00000011849pus78239.719Labrus_bergylta
ENSCSAVG00000010678-9940.071ENSLACG00000001737PUS78240.071Latimeria_chalumnae
ENSCSAVG00000010678-8947.244ENSLOCG00000015489pus79836.944Lepisosteus_oculatus
ENSCSAVG00000010678-9940.675ENSLAFG00000017478PUS78440.675Loxodonta_africana
ENSCSAVG00000010678-8830.171ENSMFAG00000041689PUS7L8230.171Macaca_fascicularis
ENSCSAVG00000010678-9941.030ENSMFAG00000046201PUS77741.030Macaca_fascicularis
ENSCSAVG00000010678-9940.422ENSMMUG00000017575PUS77740.422Macaca_mulatta
ENSCSAVG00000010678-8830.171ENSMMUG00000000203PUS7L8130.171Macaca_mulatta
ENSCSAVG00000010678-9941.030ENSMNEG00000041563PUS78341.030Macaca_nemestrina
ENSCSAVG00000010678-8830.171ENSMNEG00000034206PUS7L8230.171Macaca_nemestrina
ENSCSAVG00000010678-9941.030ENSMLEG00000001039PUS78341.030Mandrillus_leucophaeus
ENSCSAVG00000010678-8830.682ENSMLEG00000029395PUS7L8230.682Mandrillus_leucophaeus
ENSCSAVG00000010678-9940.917ENSMAMG00000023153pus78840.917Mastacembelus_armatus
ENSCSAVG00000010678-9940.569ENSMZEG00005009209pus78840.747Maylandia_zebra
ENSCSAVG00000010678-9940.107ENSMGAG00000006721PUS78340.107Meleagris_gallopavo
ENSCSAVG00000010678-8630.315ENSMGAG00000009498PUS7L8730.315Meleagris_gallopavo
ENSCSAVG00000010678-9940.853ENSMAUG00000008206Pus78340.853Mesocricetus_auratus
ENSCSAVG00000010678-8830.153ENSMICG00000043043PUS7L7230.153Microcebus_murinus
ENSCSAVG00000010678-9940.142ENSMICG00000010938PUS78340.142Microcebus_murinus
ENSCSAVG00000010678-9940.285ENSMOCG00000019335Pus78340.285Microtus_ochrogaster
ENSCSAVG00000010678-9940.598ENSMMOG00000000935pus78640.598Mola_mola
ENSCSAVG00000010678-9941.489ENSMALG00000013492pus78841.489Monopterus_albus
ENSCSAVG00000010678-9940.642MGP_CAROLIEiJ_G0026999Pus79338.728Mus_caroli
ENSCSAVG00000010678-8430.833MGP_CAROLIEiJ_G0020195Pus7l6530.561Mus_caroli
ENSCSAVG00000010678-9940.820ENSMUSG00000057541Pus79238.728Mus_musculus
ENSCSAVG00000010678-8430.833ENSMUSG00000033356Pus7l6630.353Mus_musculus
ENSCSAVG00000010678-9941.176MGP_PahariEiJ_G0021771Pus79338.728Mus_pahari
ENSCSAVG00000010678-9940.998MGP_SPRETEiJ_G0027995Pus79338.728Mus_spretus
ENSCSAVG00000010678-9047.656ENSMPUG00000018259PUS79940.445Mustela_putorius_furo
ENSCSAVG00000010678-8830.019ENSMPUG00000000357PUS7L7230.019Mustela_putorius_furo
ENSCSAVG00000010678-9940.675ENSMLUG00000004941PUS78240.675Myotis_lucifugus
ENSCSAVG00000010678-8830.153ENSMLUG00000006609PUS7L7230.153Myotis_lucifugus
ENSCSAVG00000010678-8433.613ENSNGAG00000005138Pus7l7230.561Nannospalax_galili
ENSCSAVG00000010678-9940.853ENSNGAG00000023354Pus78440.070Nannospalax_galili
ENSCSAVG00000010678-9940.747ENSNBRG00000019065pus78740.747Neolamprologus_brichardi
ENSCSAVG00000010678-9940.675ENSNLEG00000008956PUS78340.675Nomascus_leucogenys
ENSCSAVG00000010678-8431.092ENSNLEG00000017934PUS7L9532.308Nomascus_leucogenys
ENSCSAVG00000010678-9941.385ENSODEG00000001435PUS78341.385Octodon_degus
ENSCSAVG00000010678-8830.344ENSODEG00000003484PUS7L7230.344Octodon_degus
ENSCSAVG00000010678-9940.569ENSONIG00000008804pus78740.747Oreochromis_niloticus
ENSCSAVG00000010678-9941.021ENSOANG00000003163PUS78241.197Ornithorhynchus_anatinus
ENSCSAVG00000010678-8433.613ENSOANG00000021234-8935.233Ornithorhynchus_anatinus
ENSCSAVG00000010678-9941.385ENSOCUG00000029160PUS77741.385Oryctolagus_cuniculus
ENSCSAVG00000010678-9940.526ENSORLG00000002656pus77940.526Oryzias_latipes
ENSCSAVG00000010678-9940.603ENSORLG00020019416pus78340.603Oryzias_latipes_hni
ENSCSAVG00000010678-9940.174ENSORLG00015012352pus78740.174Oryzias_latipes_hsok
ENSCSAVG00000010678-9248.462ENSOMEG00000008389pus78740.877Oryzias_melastigma
ENSCSAVG00000010678-9046.094ENSOGAG00000000450PUS78332.149Otolemur_garnettii
ENSCSAVG00000010678-8830.095ENSOGAG00000028696PUS7L7230.095Otolemur_garnettii
ENSCSAVG00000010678-9940.885ENSOARG00000003160PUS77740.885Ovis_aries
ENSCSAVG00000010678-8433.613ENSOARG00000019691PUS7L7030.664Ovis_aries
ENSCSAVG00000010678-9940.675ENSPPAG00000043532PUS78340.675Pan_paniscus
ENSCSAVG00000010678-8830.639ENSPPRG00000007811PUS7L7230.639Panthera_pardus
ENSCSAVG00000010678-9941.030ENSPPRG00000021307PUS78341.030Panthera_pardus
ENSCSAVG00000010678-9941.030ENSPTIG00000018973PUS78341.030Panthera_tigris_altaica
ENSCSAVG00000010678-8830.418ENSPTIG00000012752PUS7L7230.418Panthera_tigris_altaica
ENSCSAVG00000010678-9940.675ENSPTRG00000043961-8340.675Pan_troglodytes
ENSCSAVG00000010678-9940.675ENSPTRG00000019565PUS78340.675Pan_troglodytes
ENSCSAVG00000010678-8947.244ENSPANG00000014230PUS78236.945Papio_anubis
ENSCSAVG00000010678-8830.171ENSPANG00000007286PUS7L8130.171Papio_anubis
ENSCSAVG00000010678-9941.030ENSPKIG00000007013pus78640.598Paramormyrops_kingsleyae
ENSCSAVG00000010678-9940.106ENSPSIG00000004034PUS78540.106Pelodiscus_sinensis
ENSCSAVG00000010678-8432.773ENSPSIG00000013905PUS7L8430.118Pelodiscus_sinensis
ENSCSAVG00000010678-8630.153ENSPMGG00000007626pus7l7830.153Periophthalmus_magnuspinnatus
ENSCSAVG00000010678-9941.176ENSPMGG00000018583pus78741.176Periophthalmus_magnuspinnatus
ENSCSAVG00000010678-8431.092ENSPEMG00000016583Pus7l6630.353Peromyscus_maniculatus_bairdii
ENSCSAVG00000010678-9938.612ENSPEMG00000022616Pus78238.612Peromyscus_maniculatus_bairdii
ENSCSAVG00000010678-9940.320ENSPCIG00000013543PUS76440.320Phascolarctos_cinereus
ENSCSAVG00000010678-9940.598ENSPLAG00000015182pus78740.747Poecilia_latipinna
ENSCSAVG00000010678-9940.998ENSPMEG00000006466pus78740.998Poecilia_mexicana
ENSCSAVG00000010678-9940.925ENSPREG00000019080pus78740.925Poecilia_reticulata
ENSCSAVG00000010678-9938.011ENSPPYG00000017891PUS78238.011Pongo_abelii
ENSCSAVG00000010678-9046.875ENSPCAG00000004241PUS77238.247Procavia_capensis
ENSCSAVG00000010678-9940.675ENSPCOG00000027014PUS78340.675Propithecus_coquereli
ENSCSAVG00000010678-9030.582ENSPCOG00000025211PUS7L7330.582Propithecus_coquereli
ENSCSAVG00000010678-9938.899ENSPVAG00000003679PUS78338.899Pteropus_vampyrus
ENSCSAVG00000010678-9940.569ENSPNYG00000006752pus78740.747Pundamilia_nyererei
ENSCSAVG00000010678-8331.405ENSPNAG00000023742pus7l7131.211Pygocentrus_nattereri
ENSCSAVG00000010678-9939.929ENSPNAG00000010812pus77939.929Pygocentrus_nattereri
ENSCSAVG00000010678-9940.426ENSRNOG00000010572Pus78340.426Rattus_norvegicus
ENSCSAVG00000010678-9937.367ENSRBIG00000012520PUS78337.367Rhinopithecus_bieti
ENSCSAVG00000010678-9941.030ENSRROG00000042960PUS78341.030Rhinopithecus_roxellana
ENSCSAVG00000010678-9832.253YOR243C-9332.253Saccharomyces_cerevisiae
ENSCSAVG00000010678-8830.344ENSSBOG00000026558PUS7L7230.344Saimiri_boliviensis_boliviensis
ENSCSAVG00000010678-9941.741ENSSBOG00000030836PUS78341.741Saimiri_boliviensis_boliviensis
ENSCSAVG00000010678-9941.103ENSSHAG00000008584PUS78341.103Sarcophilus_harrisii
ENSCSAVG00000010678-9940.675ENSSFOG00015002315pus78641.030Scleropages_formosus
ENSCSAVG00000010678-9941.637ENSSMAG00000007173pus78841.815Scophthalmus_maximus
ENSCSAVG00000010678-9941.103ENSSDUG00000023238pus78739.858Seriola_dumerili
ENSCSAVG00000010678-9941.103ENSSLDG00000023664pus78841.103Seriola_lalandi_dorsalis
ENSCSAVG00000010678-7131.628ENSSARG00000008998PUS7L5831.628Sorex_araneus
ENSCSAVG00000010678-8349.275ENSSARG00000013253PUS77249.275Sorex_araneus
ENSCSAVG00000010678-8430.579ENSSPUG00000009294PUS7L9630.065Sphenodon_punctatus
ENSCSAVG00000010678-9940.320ENSSPUG00000018496PUS78440.320Sphenodon_punctatus
ENSCSAVG00000010678-9940.853ENSSPAG00000022258pus78840.853Stegastes_partitus
ENSCSAVG00000010678-8434.454ENSSSCG00000000800PUS7L7230.326Sus_scrofa
ENSCSAVG00000010678-9940.925ENSSSCG00000015428PUS77940.317Sus_scrofa
ENSCSAVG00000010678-8433.613ENSTGUG00000005924PUS7L8730.769Taeniopygia_guttata
ENSCSAVG00000010678-9940.107ENSTGUG00000002961PUS79340.107Taeniopygia_guttata
ENSCSAVG00000010678-9941.593ENSTRUG00000016532pus78441.593Takifugu_rubripes
ENSCSAVG00000010678-9941.799ENSTNIG00000015967pus79241.799Tetraodon_nigroviridis
ENSCSAVG00000010678-9037.500ENSTBEG00000004158-6542.051Tupaia_belangeri
ENSCSAVG00000010678-9941.030ENSTTRG00000001476PUS78341.030Tursiops_truncatus
ENSCSAVG00000010678-8432.773ENSTTRG00000010169PUS7L6631.120Tursiops_truncatus
ENSCSAVG00000010678-9940.642ENSUMAG00000018369PUS78940.642Ursus_maritimus
ENSCSAVG00000010678-8830.593ENSVPAG00000001345PUS7L7330.593Vicugna_pacos
ENSCSAVG00000010678-9938.544ENSVPAG00000008585PUS78338.544Vicugna_pacos
ENSCSAVG00000010678-9940.853ENSVVUG00000014455PUS78340.246Vulpes_vulpes
ENSCSAVG00000010678-8830.361ENSVVUG00000016965PUS7L7030.361Vulpes_vulpes
ENSCSAVG00000010678-9941.208ENSXETG00000023207pus78441.208Xenopus_tropicalis
ENSCSAVG00000010678-9940.107ENSXCOG00000020897pus78640.107Xiphophorus_couchianus
ENSCSAVG00000010678-9940.036ENSXMAG00000012668pus78339.506Xiphophorus_maculatus

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