EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010683 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2714 bases
Position: chrreftig_48:2015674-2018387
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018156	tRNA-synt_2d	PF01409.20	9.7e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018353	-	1663	-	ENSCSAVP00000018156	504 (aa)	-	H2ZKP0

Gene Model

Click here to download ENSCSAVG00000010683's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010683	-	98	63.380	ENSG00000179115	FARSA	98	63.380	Homo_sapiens
ENSCSAVG00000010683	-	98	67.807	ENSAPOG00000011465	farsa	99	67.807	Acanthochromis_polyacanthus
ENSCSAVG00000010683	-	98	62.374	ENSAMEG00000012446	FARSA	98	62.374	Ailuropoda_melanoleuca
ENSCSAVG00000010683	-	98	63.380	ENSACIG00000020499	farsa	99	63.380	Amphilophus_citrinellus
ENSCSAVG00000010683	-	98	68.209	ENSAOCG00000000581	farsa	99	68.209	Amphiprion_ocellaris
ENSCSAVG00000010683	-	98	68.209	ENSAPEG00000017695	farsa	99	68.209	Amphiprion_percula
ENSCSAVG00000010683	-	98	63.380	ENSATEG00000012807	farsa	99	63.380	Anabas_testudineus
ENSCSAVG00000010683	-	98	55.533	ENSATEG00000012633	farsa	99	55.533	Anabas_testudineus
ENSCSAVG00000010683	-	93	67.091	ENSACAG00000017166	FARSA	79	67.091	Anolis_carolinensis
ENSCSAVG00000010683	-	98	63.895	ENSANAG00000037420	FARSA	98	63.581	Aotus_nancymaae
ENSCSAVG00000010683	-	98	68.410	ENSACLG00000001716	farsa	99	68.410	Astatotilapia_calliptera
ENSCSAVG00000010683	-	98	66.600	ENSAMXG00000037912	farsa	99	66.600	Astyanax_mexicanus
ENSCSAVG00000010683	-	98	62.173	ENSBTAG00000021374	FARSA	98	62.173	Bos_taurus
ENSCSAVG00000010683	-	98	59.798	WBGene00001497	fars-1	98	59.798	Caenorhabditis_elegans
ENSCSAVG00000010683	-	98	63.563	ENSCJAG00000004686	FARSA	97	60.966	Callithrix_jacchus
ENSCSAVG00000010683	-	98	62.777	ENSCAFG00000017096	FARSA	98	62.777	Canis_familiaris
ENSCSAVG00000010683	-	98	62.777	ENSCAFG00020005315	FARSA	98	62.777	Canis_lupus_dingo
ENSCSAVG00000010683	-	98	58.954	ENSCHIG00000022617	FARSA	98	58.954	Capra_hircus
ENSCSAVG00000010683	-	91	61.438	ENSTSYG00000002595	FARSA	83	61.438	Carlito_syrichta
ENSCSAVG00000010683	-	90	64.758	ENSCAPG00000011353	FARSA	95	65.402	Cavia_aperea
ENSCSAVG00000010683	-	98	62.777	ENSCPOG00000000787	FARSA	98	62.777	Cavia_porcellus
ENSCSAVG00000010683	-	98	63.489	ENSCCAG00000028176	FARSA	98	63.179	Cebus_capucinus
ENSCSAVG00000010683	-	98	62.777	ENSCLAG00000015489	FARSA	98	62.777	Chinchilla_lanigera
ENSCSAVG00000010683	-	92	66.237	ENSCSAG00000006530	FARSA	97	66.237	Chlorocebus_sabaeus
ENSCSAVG00000010683	-	93	68.153	ENSCPBG00000023915	FARSA	99	65.469	Chrysemys_picta_bellii
ENSCSAVG00000010683	-	99	89.336	ENSCING00000002567	-	100	89.336	Ciona_intestinalis
ENSCSAVG00000010683	-	97	64.490	ENSCANG00000043649	-	96	64.490	Colobus_angolensis_palliatus
ENSCSAVG00000010683	-	95	64.435	ENSCGRG00001019769	Farsa	98	62.575	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010683	-	95	64.435	ENSCGRG00000013415	Farsa	98	62.575	Cricetulus_griseus_crigri
ENSCSAVG00000010683	-	99	66.998	ENSCSEG00000016214	farsa	97	66.998	Cynoglossus_semilaevis
ENSCSAVG00000010683	-	98	68.410	ENSCVAG00000007907	farsa	99	68.410	Cyprinodon_variegatus
ENSCSAVG00000010683	-	98	67.404	ENSDARG00000098825	farsa	99	67.404	Danio_rerio
ENSCSAVG00000010683	-	94	64.496	ENSDNOG00000032350	FARSA	97	64.496	Dasypus_novemcinctus
ENSCSAVG00000010683	-	98	62.978	ENSDORG00000010118	Farsa	98	62.978	Dipodomys_ordii
ENSCSAVG00000010683	-	98	62.551	FBgn0030007	alpha-PheRS	99	62.551	Drosophila_melanogaster
ENSCSAVG00000010683	-	98	56.740	ENSETEG00000018673	FARSA	98	56.740	Echinops_telfairi
ENSCSAVG00000010683	-	59	55.892	ENSEBUG00000008545	farsa	99	55.892	Eptatretus_burgeri
ENSCSAVG00000010683	-	92	52.731	ENSEASG00005004093	FARSA	95	52.731	Equus_asinus_asinus
ENSCSAVG00000010683	-	98	61.569	ENSECAG00000015139	FARSA	93	61.569	Equus_caballus
ENSCSAVG00000010683	-	98	67.203	ENSELUG00000010183	farsa	99	69.536	Esox_lucius
ENSCSAVG00000010683	-	98	62.777	ENSFCAG00000023511	FARSA	98	62.777	Felis_catus
ENSCSAVG00000010683	-	98	62.374	ENSFDAG00000005987	FARSA	98	62.374	Fukomys_damarensis
ENSCSAVG00000010683	-	99	68.000	ENSFHEG00000009382	farsa	95	68.000	Fundulus_heteroclitus
ENSCSAVG00000010683	-	98	69.076	ENSGMOG00000018319	farsa	99	69.076	Gadus_morhua
ENSCSAVG00000010683	-	98	61.924	ENSGALG00000040258	FARSA	88	61.924	Gallus_gallus
ENSCSAVG00000010683	-	98	67.404	ENSGAFG00000014146	farsa	99	67.404	Gambusia_affinis
ENSCSAVG00000010683	-	98	66.466	ENSGACG00000006278	farsa	99	66.466	Gasterosteus_aculeatus
ENSCSAVG00000010683	-	99	65.669	ENSGAGG00000000753	FARSA	99	65.669	Gopherus_agassizii
ENSCSAVG00000010683	-	97	64.082	ENSGGOG00000003418	FARSA	96	64.082	Gorilla_gorilla
ENSCSAVG00000010683	-	98	68.410	ENSHBUG00000019852	farsa	99	68.410	Haplochromis_burtoni
ENSCSAVG00000010683	-	98	62.173	ENSHGLG00000005213	FARSA	98	62.173	Heterocephalus_glaber_female
ENSCSAVG00000010683	-	98	62.173	ENSHGLG00100009586	FARSA	98	62.173	Heterocephalus_glaber_male
ENSCSAVG00000010683	-	98	67.404	ENSHCOG00000019548	farsa	99	67.404	Hippocampus_comes
ENSCSAVG00000010683	-	98	67.404	ENSIPUG00000007635	farsa	99	67.404	Ictalurus_punctatus
ENSCSAVG00000010683	-	98	62.777	ENSSTOG00000008748	FARSA	98	62.777	Ictidomys_tridecemlineatus
ENSCSAVG00000010683	-	98	67.606	ENSKMAG00000010698	farsa	99	67.606	Kryptolebias_marmoratus
ENSCSAVG00000010683	-	98	67.203	ENSLBEG00000006757	-	99	67.203	Labrus_bergylta
ENSCSAVG00000010683	-	84	64.319	ENSLBEG00000001258	farsa	97	64.319	Labrus_bergylta
ENSCSAVG00000010683	-	92	65.451	ENSLOCG00000008389	farsa	97	65.451	Lepisosteus_oculatus
ENSCSAVG00000010683	-	98	62.173	ENSLAFG00000016154	FARSA	98	62.173	Loxodonta_africana
ENSCSAVG00000010683	-	99	63.527	ENSMFAG00000030595	FARSA	98	63.783	Macaca_fascicularis
ENSCSAVG00000010683	-	99	63.527	ENSMMUG00000004390	FARSA	98	63.783	Macaca_mulatta
ENSCSAVG00000010683	-	99	63.527	ENSMNEG00000043866	FARSA	98	63.783	Macaca_nemestrina
ENSCSAVG00000010683	-	99	63.400	ENSMLEG00000029157	FARSA	98	63.655	Mandrillus_leucophaeus
ENSCSAVG00000010683	-	98	66.197	ENSMAMG00000010636	farsa	99	66.197	Mastacembelus_armatus
ENSCSAVG00000010683	-	98	68.410	ENSMZEG00005002319	farsa	99	68.410	Maylandia_zebra
ENSCSAVG00000010683	-	95	64.226	ENSMAUG00000009188	Farsa	98	62.374	Mesocricetus_auratus
ENSCSAVG00000010683	-	98	62.978	ENSMICG00000016272	FARSA	98	62.978	Microcebus_murinus
ENSCSAVG00000010683	-	95	63.674	ENSMOCG00000011399	Farsa	98	61.847	Microtus_ochrogaster
ENSCSAVG00000010683	-	98	65.191	ENSMMOG00000006287	farsa	99	65.191	Mola_mola
ENSCSAVG00000010683	-	95	64.644	ENSMODG00000011519	FARSA	96	64.644	Monodelphis_domestica
ENSCSAVG00000010683	-	94	67.647	ENSMALG00000001972	farsa	99	67.647	Monopterus_albus
ENSCSAVG00000010683	-	95	64.301	MGP_CAROLIEiJ_G0031312	Farsa	98	62.450	Mus_caroli
ENSCSAVG00000010683	-	95	64.301	ENSMUSG00000003808	Farsa	98	62.450	Mus_musculus
ENSCSAVG00000010683	-	95	64.092	MGP_PahariEiJ_G0022917	Farsa	98	62.450	Mus_pahari
ENSCSAVG00000010683	-	95	64.301	MGP_SPRETEiJ_G0032431	Farsa	98	62.450	Mus_spretus
ENSCSAVG00000010683	-	98	63.179	ENSMPUG00000004400	FARSA	98	63.179	Mustela_putorius_furo
ENSCSAVG00000010683	-	98	62.575	ENSMLUG00000012767	FARSA	98	62.575	Myotis_lucifugus
ENSCSAVG00000010683	-	73	67.120	ENSNGAG00000018353	Farsa	99	67.120	Nannospalax_galili
ENSCSAVG00000010683	-	98	68.008	ENSNBRG00000010063	farsa	99	68.008	Neolamprologus_brichardi
ENSCSAVG00000010683	-	98	63.489	ENSNLEG00000012899	FARSA	98	63.179	Nomascus_leucogenys
ENSCSAVG00000010683	-	98	62.702	ENSMEUG00000014253	FARSA	99	62.702	Notamacropus_eugenii
ENSCSAVG00000010683	-	98	62.777	ENSOPRG00000005004	FARSA	98	62.777	Ochotona_princeps
ENSCSAVG00000010683	-	98	62.374	ENSODEG00000010433	FARSA	98	62.374	Octodon_degus
ENSCSAVG00000010683	-	98	68.209	ENSONIG00000008075	farsa	99	68.209	Oreochromis_niloticus
ENSCSAVG00000010683	-	97	68.367	ENSORLG00000016406	farsa	89	68.367	Oryzias_latipes
ENSCSAVG00000010683	-	97	68.367	ENSORLG00020021978	farsa	98	68.367	Oryzias_latipes_hni
ENSCSAVG00000010683	-	97	68.367	ENSORLG00015015045	farsa	97	69.456	Oryzias_latipes_hsok
ENSCSAVG00000010683	-	97	68.367	ENSOMEG00000017367	farsa	96	68.367	Oryzias_melastigma
ENSCSAVG00000010683	-	98	63.783	ENSOGAG00000012243	FARSA	98	63.783	Otolemur_garnettii
ENSCSAVG00000010683	-	98	62.173	ENSOARG00000009991	FARSA	92	62.173	Ovis_aries
ENSCSAVG00000010683	-	98	63.380	ENSPPAG00000034266	FARSA	98	63.380	Pan_paniscus
ENSCSAVG00000010683	-	98	62.777	ENSPPRG00000000346	FARSA	98	62.777	Panthera_pardus
ENSCSAVG00000010683	-	91	64.924	ENSPTIG00000011502	FARSA	94	64.924	Panthera_tigris_altaica
ENSCSAVG00000010683	-	98	63.380	ENSPTRG00000010550	FARSA	98	63.380	Pan_troglodytes
ENSCSAVG00000010683	-	99	63.527	ENSPANG00000010978	FARSA	97	61.569	Papio_anubis
ENSCSAVG00000010683	-	98	67.606	ENSPKIG00000007170	farsa	99	67.606	Paramormyrops_kingsleyae
ENSCSAVG00000010683	-	89	63.077	ENSPSIG00000012701	FARSA	97	63.839	Pelodiscus_sinensis
ENSCSAVG00000010683	-	98	63.380	ENSPMGG00000001401	farsa	99	63.380	Periophthalmus_magnuspinnatus
ENSCSAVG00000010683	-	95	64.017	ENSPEMG00000012560	Farsa	98	62.173	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010683	-	98	65.927	ENSPMAG00000008453	farsa	99	65.927	Petromyzon_marinus
ENSCSAVG00000010683	-	95	64.854	ENSPCIG00000019294	FARSA	96	64.854	Phascolarctos_cinereus
ENSCSAVG00000010683	-	98	67.404	ENSPFOG00000001201	farsa	99	67.404	Poecilia_formosa
ENSCSAVG00000010683	-	98	67.404	ENSPLAG00000018191	farsa	99	67.404	Poecilia_latipinna
ENSCSAVG00000010683	-	98	67.404	ENSPMEG00000013547	farsa	99	67.404	Poecilia_mexicana
ENSCSAVG00000010683	-	98	62.777	ENSPREG00000013620	farsa	99	62.777	Poecilia_reticulata
ENSCSAVG00000010683	-	98	63.380	ENSPPYG00000009615	FARSA	98	63.380	Pongo_abelii
ENSCSAVG00000010683	-	98	61.972	ENSPCAG00000015721	FARSA	98	61.972	Procavia_capensis
ENSCSAVG00000010683	-	98	62.777	ENSPCOG00000014412	FARSA	98	62.777	Propithecus_coquereli
ENSCSAVG00000010683	-	85	77.209	ENSPVAG00000014714	FARSA	84	77.209	Pteropus_vampyrus
ENSCSAVG00000010683	-	98	68.410	ENSPNYG00000002144	farsa	99	68.410	Pundamilia_nyererei
ENSCSAVG00000010683	-	98	67.677	ENSPNAG00000000869	farsa	99	67.606	Pygocentrus_nattereri
ENSCSAVG00000010683	-	99	62.450	ENSRNOG00000003149	Farsa	98	62.450	Rattus_norvegicus
ENSCSAVG00000010683	-	98	63.581	ENSRBIG00000025585	FARSA	96	66.222	Rhinopithecus_bieti
ENSCSAVG00000010683	-	98	63.581	ENSRROG00000040046	FARSA	97	61.368	Rhinopithecus_roxellana
ENSCSAVG00000010683	-	98	48.303	YFL022C	FRS2	99	48.303	Saccharomyces_cerevisiae
ENSCSAVG00000010683	-	98	63.380	ENSSBOG00000031362	FARSA	98	63.380	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010683	-	89	65.402	ENSSHAG00000015006	FARSA	100	65.402	Sarcophilus_harrisii
ENSCSAVG00000010683	-	98	66.600	ENSSFOG00015014864	farsa	99	66.600	Scleropages_formosus
ENSCSAVG00000010683	-	97	67.959	ENSSMAG00000002358	farsa	98	67.959	Scophthalmus_maximus
ENSCSAVG00000010683	-	98	67.606	ENSSDUG00000008631	farsa	99	67.606	Seriola_dumerili
ENSCSAVG00000010683	-	98	67.606	ENSSLDG00000017108	farsa	99	67.606	Seriola_lalandi_dorsalis
ENSCSAVG00000010683	-	66	78.788	ENSSARG00000006579	-	67	78.788	Sorex_araneus
ENSCSAVG00000010683	-	87	57.631	ENSSPUG00000012509	FARSA	99	55.484	Sphenodon_punctatus
ENSCSAVG00000010683	-	99	66.667	ENSSPAG00000018292	farsa	93	66.667	Stegastes_partitus
ENSCSAVG00000010683	-	98	62.173	ENSSSCG00000013745	FARSA	98	62.173	Sus_scrofa
ENSCSAVG00000010683	-	95	62.762	ENSTRUG00000010624	farsa	96	62.762	Takifugu_rubripes
ENSCSAVG00000010683	-	95	65.344	ENSTNIG00000008330	farsa	96	65.344	Tetraodon_nigroviridis
ENSCSAVG00000010683	-	89	63.170	ENSTBEG00000000396	FARSA	97	63.170	Tupaia_belangeri
ENSCSAVG00000010683	-	86	78.788	ENSTTRG00000003599	FARSA	85	78.788	Tursiops_truncatus
ENSCSAVG00000010683	-	98	62.575	ENSUAMG00000010230	FARSA	98	62.575	Ursus_americanus
ENSCSAVG00000010683	-	98	62.575	ENSUMAG00000006110	FARSA	98	62.575	Ursus_maritimus
ENSCSAVG00000010683	-	98	62.777	ENSVVUG00000024145	FARSA	98	62.777	Vulpes_vulpes
ENSCSAVG00000010683	-	98	66.064	ENSXETG00000007936	farsa	99	66.064	Xenopus_tropicalis
ENSCSAVG00000010683	-	98	60.643	ENSXCOG00000015512	farsa	99	60.643	Xiphophorus_couchianus
ENSCSAVG00000010683	-	98	67.606	ENSXMAG00000008832	farsa	99	67.606	Xiphophorus_maculatus