EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000010686 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Minus strand
Length: 6070 bases
Position: chrreftig_9:2215253-2221322
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018160	MMR_HSR1	PF01926.23	5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018357	-	1062	-	ENSCSAVP00000018160	232 (aa)	-	H2ZKP4
ENSCSAVT00000018356	-	824	-	ENSCSAVP00000018159	133 (aa)	-	H2ZKP3
ENSCSAVT00000018358	-	884	-	ENSCSAVP00000018161	231 (aa)	-	H2ZKP5

Gene Model

Click here to download ENSCSAVG00000010686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000010686	-	81	33.333	ENSCSAVG00000007620	-	98	34.392
ENSCSAVG00000010686	-	76	34.831	ENSCSAVG00000007011	-	93	34.831
ENSCSAVG00000010686	-	72	35.119	ENSCSAVG00000007010	-	88	35.119
ENSCSAVG00000010686	-	59	36.496	ENSCSAVG00000000059	-	77	36.496
ENSCSAVG00000010686	-	57	34.783	ENSCSAVG00000000015	-	73	34.783
ENSCSAVG00000010686	-	78	34.615	ENSCSAVG00000000504	-	94	34.615
ENSCSAVG00000010686	-	75	31.429	ENSCSAVG00000008290	-	87	31.429
ENSCSAVG00000010686	-	56	38.346	ENSCSAVG00000001959	-	73	38.346

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010686	-	74	71.345	ENSCING00000023306	-	91	71.345	Ciona_intestinalis