EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010865 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 826 bases
Position: chrreftig_19:4083563-4084388
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018511	EXOSC1	PF10447.9	2.3e-17	1	1
ENSCSAVP00000018511	ECR1_N	PF14382.6	5.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018712	-	791	-	ENSCSAVP00000018511	195 (aa)	-	H2ZLP5

Gene Model

Click here to download ENSCSAVG00000010865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010865	-	95	57.754	ENSG00000171311	EXOSC1	95	57.754	Homo_sapiens
ENSCSAVG00000010865	-	98	54.404	ENSAPOG00000007822	exosc1	99	54.404	Acanthochromis_polyacanthus
ENSCSAVG00000010865	-	95	58.289	ENSAMEG00000000129	EXOSC1	95	58.289	Ailuropoda_melanoleuca
ENSCSAVG00000010865	-	94	55.978	ENSACIG00000018956	exosc1	90	55.978	Amphilophus_citrinellus
ENSCSAVG00000010865	-	98	54.404	ENSAOCG00000010699	exosc1	99	54.404	Amphiprion_ocellaris
ENSCSAVG00000010865	-	88	46.512	ENSAPEG00000012690	exosc1	92	46.512	Amphiprion_percula
ENSCSAVG00000010865	-	98	54.404	ENSATEG00000018683	exosc1	99	54.404	Anabas_testudineus
ENSCSAVG00000010865	-	95	56.684	ENSACAG00000002101	EXOSC1	95	56.684	Anolis_carolinensis
ENSCSAVG00000010865	-	95	57.754	ENSANAG00000034669	EXOSC1	95	57.754	Aotus_nancymaae
ENSCSAVG00000010865	-	98	54.404	ENSACLG00000021243	exosc1	99	54.404	Astatotilapia_calliptera
ENSCSAVG00000010865	-	98	57.513	ENSAMXG00000011116	exosc1	99	57.513	Astyanax_mexicanus
ENSCSAVG00000010865	-	95	58.289	ENSBTAG00000012699	EXOSC1	95	58.289	Bos_taurus
ENSCSAVG00000010865	-	96	31.000	WBGene00012966	exos-1	95	31.000	Caenorhabditis_elegans
ENSCSAVG00000010865	-	95	57.219	ENSCJAG00000016586	EXOSC1	95	57.219	Callithrix_jacchus
ENSCSAVG00000010865	-	95	57.754	ENSCAFG00000009068	EXOSC1	90	57.754	Canis_familiaris
ENSCSAVG00000010865	-	95	57.754	ENSCAFG00020006002	EXOSC1	90	57.754	Canis_lupus_dingo
ENSCSAVG00000010865	-	95	58.289	ENSCHIG00000015253	EXOSC1	95	58.289	Capra_hircus
ENSCSAVG00000010865	-	95	57.219	ENSTSYG00000000760	EXOSC1	95	57.219	Carlito_syrichta
ENSCSAVG00000010865	-	95	58.289	ENSCPOG00000001173	EXOSC1	95	58.289	Cavia_porcellus
ENSCSAVG00000010865	-	95	32.632	ENSCCAG00000023986	EXOSC1	95	32.632	Cebus_capucinus
ENSCSAVG00000010865	-	95	57.754	ENSCATG00000034114	EXOSC1	95	57.754	Cercocebus_atys
ENSCSAVG00000010865	-	95	58.289	ENSCLAG00000002463	EXOSC1	95	58.289	Chinchilla_lanigera
ENSCSAVG00000010865	-	95	57.219	ENSCSAG00000005870	EXOSC1	95	57.219	Chlorocebus_sabaeus
ENSCSAVG00000010865	-	92	50.829	ENSCHOG00000006477	EXOSC1	96	50.829	Choloepus_hoffmanni
ENSCSAVG00000010865	-	55	47.664	ENSCPBG00000011949	EXOSC1	88	47.664	Chrysemys_picta_bellii
ENSCSAVG00000010865	-	99	71.134	ENSCING00000022734	-	93	71.134	Ciona_intestinalis
ENSCSAVG00000010865	-	95	57.754	ENSCANG00000034159	EXOSC1	95	57.754	Colobus_angolensis_palliatus
ENSCSAVG00000010865	-	95	56.150	ENSCGRG00001000335	Exosc1	95	56.150	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010865	-	95	56.150	ENSCGRG00000011602	Exosc1	95	56.150	Cricetulus_griseus_crigri
ENSCSAVG00000010865	-	98	48.187	ENSCSEG00000007895	exosc1	95	48.187	Cynoglossus_semilaevis
ENSCSAVG00000010865	-	98	54.404	ENSCVAG00000016748	exosc1	99	54.404	Cyprinodon_variegatus
ENSCSAVG00000010865	-	98	56.477	ENSDARG00000059841	exosc1	99	56.477	Danio_rerio
ENSCSAVG00000010865	-	72	56.338	ENSDNOG00000007983	EXOSC1	95	56.338	Dasypus_novemcinctus
ENSCSAVG00000010865	-	95	57.219	ENSDORG00000016528	Exosc1	95	57.219	Dipodomys_ordii
ENSCSAVG00000010865	-	96	43.590	FBgn0032346	Csl4	95	43.590	Drosophila_melanogaster
ENSCSAVG00000010865	-	95	56.150	ENSETEG00000002469	-	95	56.150	Echinops_telfairi
ENSCSAVG00000010865	-	96	56.085	ENSEBUG00000008164	exosc1	95	56.085	Eptatretus_burgeri
ENSCSAVG00000010865	-	95	54.011	ENSEASG00005008684	EXOSC1	95	54.011	Equus_asinus_asinus
ENSCSAVG00000010865	-	58	42.478	ENSECAG00000010621	EXOSC1	67	42.478	Equus_caballus
ENSCSAVG00000010865	-	95	57.754	ENSEEUG00000005647	EXOSC1	95	57.754	Erinaceus_europaeus
ENSCSAVG00000010865	-	94	55.135	ENSELUG00000017369	exosc1	98	44.103	Esox_lucius
ENSCSAVG00000010865	-	95	58.289	ENSFCAG00000040563	EXOSC1	90	58.289	Felis_catus
ENSCSAVG00000010865	-	95	55.615	ENSFALG00000008450	EXOSC1	95	55.615	Ficedula_albicollis
ENSCSAVG00000010865	-	95	57.219	ENSFDAG00000000846	EXOSC1	95	57.219	Fukomys_damarensis
ENSCSAVG00000010865	-	98	55.440	ENSFHEG00000009154	exosc1	99	55.440	Fundulus_heteroclitus
ENSCSAVG00000010865	-	98	53.368	ENSGMOG00000008993	exosc1	99	53.368	Gadus_morhua
ENSCSAVG00000010865	-	95	52.406	ENSGALG00000039917	EXOSC1	90	59.091	Gallus_gallus
ENSCSAVG00000010865	-	98	55.440	ENSGAFG00000010265	exosc1	94	55.440	Gambusia_affinis
ENSCSAVG00000010865	-	98	53.368	ENSGACG00000018936	exosc1	99	53.368	Gasterosteus_aculeatus
ENSCSAVG00000010865	-	95	55.615	ENSGAGG00000019192	EXOSC1	95	55.615	Gopherus_agassizii
ENSCSAVG00000010865	-	95	51.872	ENSGGOG00000003099	EXOSC1	95	51.872	Gorilla_gorilla
ENSCSAVG00000010865	-	98	54.404	ENSHBUG00000017857	exosc1	99	54.404	Haplochromis_burtoni
ENSCSAVG00000010865	-	95	57.219	ENSHGLG00000016927	EXOSC1	95	57.219	Heterocephalus_glaber_female
ENSCSAVG00000010865	-	95	57.219	ENSHGLG00100012208	EXOSC1	95	57.219	Heterocephalus_glaber_male
ENSCSAVG00000010865	-	98	53.368	ENSHCOG00000019882	exosc1	99	53.368	Hippocampus_comes
ENSCSAVG00000010865	-	98	58.549	ENSIPUG00000007685	exosc1	99	58.549	Ictalurus_punctatus
ENSCSAVG00000010865	-	59	43.966	ENSSTOG00000029860	-	88	43.966	Ictidomys_tridecemlineatus
ENSCSAVG00000010865	-	95	57.219	ENSSTOG00000006615	EXOSC1	95	57.219	Ictidomys_tridecemlineatus
ENSCSAVG00000010865	-	95	57.754	ENSJJAG00000013311	Exosc1	95	57.754	Jaculus_jaculus
ENSCSAVG00000010865	-	98	54.404	ENSKMAG00000001202	exosc1	81	54.404	Kryptolebias_marmoratus
ENSCSAVG00000010865	-	98	54.922	ENSLBEG00000011448	exosc1	99	54.922	Labrus_bergylta
ENSCSAVG00000010865	-	98	44.724	ENSLOCG00000003776	exosc1	99	44.724	Lepisosteus_oculatus
ENSCSAVG00000010865	-	95	56.684	ENSLAFG00000015983	EXOSC1	95	56.684	Loxodonta_africana
ENSCSAVG00000010865	-	95	57.754	ENSMFAG00000001493	EXOSC1	95	57.754	Macaca_fascicularis
ENSCSAVG00000010865	-	95	57.754	ENSMMUG00000020028	EXOSC1	95	52.880	Macaca_mulatta
ENSCSAVG00000010865	-	95	57.754	ENSMNEG00000029816	EXOSC1	95	57.754	Macaca_nemestrina
ENSCSAVG00000010865	-	95	53.476	ENSMLEG00000027643	EXOSC1	95	53.476	Mandrillus_leucophaeus
ENSCSAVG00000010865	-	98	54.922	ENSMAMG00000012200	exosc1	99	54.922	Mastacembelus_armatus
ENSCSAVG00000010865	-	98	54.404	ENSMZEG00005007042	exosc1	99	54.404	Maylandia_zebra
ENSCSAVG00000010865	-	95	50.802	ENSMAUG00000020462	-	95	50.802	Mesocricetus_auratus
ENSCSAVG00000010865	-	95	58.289	ENSMICG00000007664	EXOSC1	95	52.406	Microcebus_murinus
ENSCSAVG00000010865	-	95	56.150	ENSMOCG00000006004	-	95	56.150	Microtus_ochrogaster
ENSCSAVG00000010865	-	96	51.852	ENSMOCG00000017124	-	96	51.852	Microtus_ochrogaster
ENSCSAVG00000010865	-	93	45.055	ENSMMOG00000021403	exosc1	93	45.055	Mola_mola
ENSCSAVG00000010865	-	95	54.787	ENSMODG00000004213	EXOSC1	95	54.787	Monodelphis_domestica
ENSCSAVG00000010865	-	94	55.435	ENSMALG00000007061	exosc1	92	55.435	Monopterus_albus
ENSCSAVG00000010865	-	95	55.615	MGP_CAROLIEiJ_G0022959	Exosc1	95	55.615	Mus_caroli
ENSCSAVG00000010865	-	95	55.615	ENSMUSG00000034321	Exosc1	95	55.615	Mus_musculus
ENSCSAVG00000010865	-	95	56.150	MGP_PahariEiJ_G0014449	Exosc1	95	56.150	Mus_pahari
ENSCSAVG00000010865	-	95	55.615	MGP_SPRETEiJ_G0023880	Exosc1	95	55.615	Mus_spretus
ENSCSAVG00000010865	-	95	58.289	ENSMPUG00000017044	EXOSC1	95	58.289	Mustela_putorius_furo
ENSCSAVG00000010865	-	95	57.754	ENSMLUG00000009228	EXOSC1	95	57.754	Myotis_lucifugus
ENSCSAVG00000010865	-	95	56.150	ENSNGAG00000022033	Exosc1	95	56.150	Nannospalax_galili
ENSCSAVG00000010865	-	98	44.041	ENSNBRG00000024007	exosc1	98	44.041	Neolamprologus_brichardi
ENSCSAVG00000010865	-	95	57.219	ENSNLEG00000013872	EXOSC1	95	57.219	Nomascus_leucogenys
ENSCSAVG00000010865	-	56	45.872	ENSMEUG00000002246	EXOSC1	94	45.872	Notamacropus_eugenii
ENSCSAVG00000010865	-	95	56.684	ENSOPRG00000005065	EXOSC1	95	56.684	Ochotona_princeps
ENSCSAVG00000010865	-	95	57.754	ENSODEG00000016709	EXOSC1	95	57.754	Octodon_degus
ENSCSAVG00000010865	-	98	54.922	ENSONIG00000017683	exosc1	98	54.922	Oreochromis_niloticus
ENSCSAVG00000010865	-	57	62.500	ENSOANG00000006563	EXOSC1	95	59.167	Ornithorhynchus_anatinus
ENSCSAVG00000010865	-	95	51.872	ENSOCUG00000026461	-	95	51.872	Oryctolagus_cuniculus
ENSCSAVG00000010865	-	95	56.915	ENSOCUG00000011898	-	95	56.915	Oryctolagus_cuniculus
ENSCSAVG00000010865	-	98	52.577	ENSORLG00000011595	exosc1	99	52.577	Oryzias_latipes
ENSCSAVG00000010865	-	98	52.577	ENSORLG00020005831	exosc1	99	52.577	Oryzias_latipes_hni
ENSCSAVG00000010865	-	98	52.577	ENSORLG00015004317	exosc1	99	52.577	Oryzias_latipes_hsok
ENSCSAVG00000010865	-	98	45.078	ENSOMEG00000013907	exosc1	98	45.078	Oryzias_melastigma
ENSCSAVG00000010865	-	95	57.754	ENSOGAG00000016259	EXOSC1	95	57.754	Otolemur_garnettii
ENSCSAVG00000010865	-	95	58.289	ENSOARG00000010136	EXOSC1	95	58.289	Ovis_aries
ENSCSAVG00000010865	-	95	53.927	ENSPPAG00000039842	EXOSC1	95	53.927	Pan_paniscus
ENSCSAVG00000010865	-	95	58.289	ENSPPRG00000023366	EXOSC1	95	58.289	Panthera_pardus
ENSCSAVG00000010865	-	95	58.289	ENSPTIG00000017701	EXOSC1	95	58.289	Panthera_tigris_altaica
ENSCSAVG00000010865	-	95	57.754	ENSPTRG00000002808	EXOSC1	95	57.754	Pan_troglodytes
ENSCSAVG00000010865	-	95	57.754	ENSPANG00000021324	EXOSC1	95	57.754	Papio_anubis
ENSCSAVG00000010865	-	98	56.995	ENSPKIG00000016037	exosc1	99	56.995	Paramormyrops_kingsleyae
ENSCSAVG00000010865	-	89	48.045	ENSPSIG00000013571	EXOSC1	97	54.167	Pelodiscus_sinensis
ENSCSAVG00000010865	-	98	48.187	ENSPMGG00000014002	exosc1	99	48.187	Periophthalmus_magnuspinnatus
ENSCSAVG00000010865	-	95	56.150	ENSPEMG00000010710	-	95	56.150	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010865	-	94	54.891	ENSPMAG00000000195	exosc1	94	54.891	Petromyzon_marinus
ENSCSAVG00000010865	-	95	54.545	ENSPCIG00000002210	EXOSC1	94	54.545	Phascolarctos_cinereus
ENSCSAVG00000010865	-	98	54.404	ENSPFOG00000006755	exosc1	94	54.404	Poecilia_formosa
ENSCSAVG00000010865	-	98	54.404	ENSPLAG00000005880	exosc1	99	54.404	Poecilia_latipinna
ENSCSAVG00000010865	-	98	54.404	ENSPMEG00000015598	exosc1	94	54.404	Poecilia_mexicana
ENSCSAVG00000010865	-	98	48.705	ENSPREG00000000405	exosc1	93	48.705	Poecilia_reticulata
ENSCSAVG00000010865	-	95	57.219	ENSPPYG00000002531	EXOSC1	95	57.219	Pongo_abelii
ENSCSAVG00000010865	-	95	56.684	ENSPCAG00000009135	EXOSC1	95	56.684	Procavia_capensis
ENSCSAVG00000010865	-	95	53.476	ENSPCOG00000027539	EXOSC1	95	53.476	Propithecus_coquereli
ENSCSAVG00000010865	-	95	57.754	ENSPVAG00000003372	EXOSC1	95	57.754	Pteropus_vampyrus
ENSCSAVG00000010865	-	98	54.404	ENSPNYG00000021745	exosc1	99	54.404	Pundamilia_nyererei
ENSCSAVG00000010865	-	98	58.031	ENSPNAG00000001944	exosc1	99	58.031	Pygocentrus_nattereri
ENSCSAVG00000010865	-	95	56.150	ENSRNOG00000048708	Exosc1	95	56.150	Rattus_norvegicus
ENSCSAVG00000010865	-	95	57.754	ENSRBIG00000035618	EXOSC1	95	57.754	Rhinopithecus_bieti
ENSCSAVG00000010865	-	95	57.754	ENSRROG00000032589	EXOSC1	95	51.872	Rhinopithecus_roxellana
ENSCSAVG00000010865	-	64	36.250	YNL232W	CSL4	55	36.250	Saccharomyces_cerevisiae
ENSCSAVG00000010865	-	95	57.754	ENSSBOG00000000359	EXOSC1	95	57.754	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010865	-	73	57.241	ENSSHAG00000018219	EXOSC1	99	57.241	Sarcophilus_harrisii
ENSCSAVG00000010865	-	96	56.915	ENSSFOG00015016289	-	96	56.915	Scleropages_formosus
ENSCSAVG00000010865	-	98	56.477	ENSSFOG00015009069	exosc1	99	56.477	Scleropages_formosus
ENSCSAVG00000010865	-	98	53.886	ENSSMAG00000003721	exosc1	99	53.886	Scophthalmus_maximus
ENSCSAVG00000010865	-	98	53.368	ENSSDUG00000002993	exosc1	99	53.368	Seriola_dumerili
ENSCSAVG00000010865	-	98	53.368	ENSSLDG00000025181	exosc1	99	53.368	Seriola_lalandi_dorsalis
ENSCSAVG00000010865	-	95	51.337	ENSSARG00000000162	EXOSC1	95	51.337	Sorex_araneus
ENSCSAVG00000010865	-	96	56.383	ENSSPUG00000012263	EXOSC1	96	56.383	Sphenodon_punctatus
ENSCSAVG00000010865	-	98	47.150	ENSSPAG00000016792	exosc1	82	47.150	Stegastes_partitus
ENSCSAVG00000010865	-	95	58.289	ENSSSCG00000010518	EXOSC1	87	58.289	Sus_scrofa
ENSCSAVG00000010865	-	95	55.615	ENSTGUG00000009692	EXOSC1	96	55.615	Taeniopygia_guttata
ENSCSAVG00000010865	-	96	55.319	ENSTRUG00000007706	exosc1	97	55.319	Takifugu_rubripes
ENSCSAVG00000010865	-	96	55.497	ENSTNIG00000014079	exosc1	96	55.497	Tetraodon_nigroviridis
ENSCSAVG00000010865	-	95	56.684	ENSTBEG00000006011	EXOSC1	95	56.684	Tupaia_belangeri
ENSCSAVG00000010865	-	93	57.377	ENSTTRG00000009887	EXOSC1	99	57.377	Tursiops_truncatus
ENSCSAVG00000010865	-	95	49.198	ENSUAMG00000010266	EXOSC1	95	49.198	Ursus_americanus
ENSCSAVG00000010865	-	95	49.198	ENSUMAG00000022002	EXOSC1	95	49.198	Ursus_maritimus
ENSCSAVG00000010865	-	95	57.754	ENSVVUG00000023192	EXOSC1	60	57.754	Vulpes_vulpes
ENSCSAVG00000010865	-	95	54.011	ENSXETG00000003434	exosc1	96	54.011	Xenopus_tropicalis
ENSCSAVG00000010865	-	62	60.656	ENSXCOG00000014499	exosc1	94	60.656	Xiphophorus_couchianus
ENSCSAVG00000010865	-	98	48.705	ENSXMAG00000023382	exosc1	93	48.705	Xiphophorus_maculatus