EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000010868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 2343 bases
Position: chrreftig_19:4084425-4086767
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018514	zf-CCHC	PF00098.23	2.6e-07	1	1
ENSCSAVP00000018514	RRM_1	PF00076.22	3.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018715	-	816	-	ENSCSAVP00000018514	220 (aa)	-	H2ZLP8

Gene Model

Click here to download ENSCSAVG00000010868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000010868	-	75	44.848	ENSCSAVG00000007369	-	66	50.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010868	-	55	59.016	ENSG00000115875	SRSF7	86	56.349	Homo_sapiens
ENSCSAVG00000010868	-	55	58.197	ENSACIG00000009890	srsf7b	88	55.556	Amphilophus_citrinellus
ENSCSAVG00000010868	-	76	40.719	ENSACIG00000016419	-	53	57.500	Amphilophus_citrinellus
ENSCSAVG00000010868	-	56	55.645	ENSACIG00000004885	srsf7a	72	54.400	Amphilophus_citrinellus
ENSCSAVG00000010868	-	60	42.748	ENSAOCG00000021499	srsf7b	81	40.800	Amphiprion_ocellaris
ENSCSAVG00000010868	-	75	40.244	ENSAPEG00000013125	-	63	57.500	Amphiprion_percula
ENSCSAVG00000010868	-	60	42.748	ENSAPEG00000018802	srsf7b	81	40.800	Amphiprion_percula
ENSCSAVG00000010868	-	63	42.446	ENSATEG00000006193	srsf3b	53	58.750	Anabas_testudineus
ENSCSAVG00000010868	-	55	59.016	ENSAPLG00000012167	-	52	56.349	Anas_platyrhynchos
ENSCSAVG00000010868	-	55	59.016	ENSANAG00000019399	SRSF7	83	56.349	Aotus_nancymaae
ENSCSAVG00000010868	-	75	38.554	ENSANAG00000035091	-	71	51.220	Aotus_nancymaae
ENSCSAVG00000010868	-	63	42.143	ENSAMXG00000033364	srsf3a	50	58.750	Astyanax_mexicanus
ENSCSAVG00000010868	-	56	58.065	ENSAMXG00000007005	srsf7b	54	55.556	Astyanax_mexicanus
ENSCSAVG00000010868	-	55	59.016	ENSBTAG00000014891	SRSF7	83	56.349	Bos_taurus
ENSCSAVG00000010868	-	55	59.016	ENSCJAG00000015185	SRSF7	83	56.349	Callithrix_jacchus
ENSCSAVG00000010868	-	55	59.016	ENSCAFG00020022807	SRSF7	83	56.349	Canis_lupus_dingo
ENSCSAVG00000010868	-	60	43.609	ENSCAFG00020013547	-	73	41.860	Canis_lupus_dingo
ENSCSAVG00000010868	-	55	59.016	ENSCHIG00000019180	SRSF7	83	56.349	Capra_hircus
ENSCSAVG00000010868	-	55	59.016	ENSTSYG00000012273	SRSF7	83	56.349	Carlito_syrichta
ENSCSAVG00000010868	-	55	59.016	ENSCPOG00000033318	SRSF7	83	56.349	Cavia_porcellus
ENSCSAVG00000010868	-	81	38.547	ENSCCAG00000025870	-	50	50.617	Cebus_capucinus
ENSCSAVG00000010868	-	55	59.016	ENSCATG00000031728	SRSF7	83	56.349	Cercocebus_atys
ENSCSAVG00000010868	-	55	59.016	ENSCLAG00000005235	SRSF7	83	56.349	Chinchilla_lanigera
ENSCSAVG00000010868	-	55	59.016	ENSCPBG00000018252	-	83	56.349	Chrysemys_picta_bellii
ENSCSAVG00000010868	-	55	59.016	ENSCPBG00000018247	-	83	56.349	Chrysemys_picta_bellii
ENSCSAVG00000010868	-	95	64.602	ENSCING00000023459	-	57	83.333	Ciona_intestinalis
ENSCSAVG00000010868	-	65	44.056	ENSCING00000011663	-	52	57.692	Ciona_intestinalis
ENSCSAVG00000010868	-	55	59.016	ENSCANG00000040757	SRSF7	83	56.349	Colobus_angolensis_palliatus
ENSCSAVG00000010868	-	55	59.016	ENSCGRG00000005929	Srsf7	84	56.349	Cricetulus_griseus_crigri
ENSCSAVG00000010868	-	65	53.147	ENSCSEG00000006378	srsf7a	79	55.200	Cynoglossus_semilaevis
ENSCSAVG00000010868	-	71	41.401	ENSCVAG00000003851	srsf3b	64	58.750	Cyprinodon_variegatus
ENSCSAVG00000010868	-	87	52.604	ENSDARG00000035325	srsf7a	84	59.016	Danio_rerio
ENSCSAVG00000010868	-	73	50.311	ENSDARG00000101057	srsf7b	90	53.020	Danio_rerio
ENSCSAVG00000010868	-	55	59.016	ENSDNOG00000007821	SRSF7	83	56.349	Dasypus_novemcinctus
ENSCSAVG00000010868	-	55	59.016	ENSEASG00005005547	SRSF7	83	56.349	Equus_asinus_asinus
ENSCSAVG00000010868	-	90	48.182	ENSELUG00000018155	srsf7b	83	52.381	Esox_lucius
ENSCSAVG00000010868	-	59	53.846	ENSELUG00000016922	srsf7a	76	57.143	Esox_lucius
ENSCSAVG00000010868	-	56	38.211	ENSFCAG00000028644	-	74	37.903	Felis_catus
ENSCSAVG00000010868	-	55	59.016	ENSFCAG00000031143	SRSF7	54	56.204	Felis_catus
ENSCSAVG00000010868	-	55	59.016	ENSFDAG00000016030	-	83	56.349	Fukomys_damarensis
ENSCSAVG00000010868	-	69	52.318	ENSFHEG00000007159	srsf7a	62	54.264	Fundulus_heteroclitus
ENSCSAVG00000010868	-	57	48.800	ENSFHEG00000023046	srsf7b	50	52.000	Fundulus_heteroclitus
ENSCSAVG00000010868	-	71	40.764	ENSFHEG00000005368	srsf3b	64	58.750	Fundulus_heteroclitus
ENSCSAVG00000010868	-	55	59.016	ENSGALG00000033120	SRSF7	84	56.349	Gallus_gallus
ENSCSAVG00000010868	-	61	49.254	ENSGAFG00000008856	srsf7b	83	51.969	Gambusia_affinis
ENSCSAVG00000010868	-	55	59.504	ENSGAGG00000016294	-	82	56.800	Gopherus_agassizii
ENSCSAVG00000010868	-	55	59.016	ENSGAGG00000003553	SRSF7	83	56.349	Gopherus_agassizii
ENSCSAVG00000010868	-	55	59.016	ENSGGOG00000014620	SRSF7	83	56.349	Gorilla_gorilla
ENSCSAVG00000010868	-	55	43.307	ENSHGLG00000005295	-	82	43.077	Heterocephalus_glaber_female
ENSCSAVG00000010868	-	55	43.307	ENSHGLG00100014570	-	82	43.077	Heterocephalus_glaber_male
ENSCSAVG00000010868	-	55	59.016	ENSHGLG00100006124	-	83	56.349	Heterocephalus_glaber_male
ENSCSAVG00000010868	-	71	40.764	ENSIPUG00000017382	srsf3	63	58.750	Ictalurus_punctatus
ENSCSAVG00000010868	-	55	58.197	ENSIPUG00000011708	srsf7	65	55.556	Ictalurus_punctatus
ENSCSAVG00000010868	-	55	59.016	ENSSTOG00000004389	SRSF7	83	56.349	Ictidomys_tridecemlineatus
ENSCSAVG00000010868	-	60	42.963	ENSJJAG00000020230	-	71	42.636	Jaculus_jaculus
ENSCSAVG00000010868	-	55	55.738	ENSLACG00000018688	srsf7a	55	54.331	Latimeria_chalumnae
ENSCSAVG00000010868	-	55	58.197	ENSLACG00000004052	SRSF7	84	48.611	Latimeria_chalumnae
ENSCSAVG00000010868	-	55	54.918	ENSLOCG00000014314	-	60	54.472	Lepisosteus_oculatus
ENSCSAVG00000010868	-	55	59.016	ENSLAFG00000005666	SRSF7	71	56.349	Loxodonta_africana
ENSCSAVG00000010868	-	55	59.016	ENSMFAG00000001980	SRSF7	83	56.349	Macaca_fascicularis
ENSCSAVG00000010868	-	55	59.504	ENSMMUG00000011025	SRSF7	55	67.857	Macaca_mulatta
ENSCSAVG00000010868	-	55	59.016	ENSMNEG00000036669	SRSF7	55	67.857	Macaca_nemestrina
ENSCSAVG00000010868	-	55	59.016	ENSMLEG00000038852	SRSF7	83	56.349	Mandrillus_leucophaeus
ENSCSAVG00000010868	-	74	52.469	ENSMAMG00000017138	srsf7b	50	56.349	Mastacembelus_armatus
ENSCSAVG00000010868	-	55	59.016	ENSMGAG00000007415	SRSF7	53	56.349	Meleagris_gallopavo
ENSCSAVG00000010868	-	75	40.000	ENSMAUG00000021932	-	57	46.825	Mesocricetus_auratus
ENSCSAVG00000010868	-	51	43.103	ENSMICG00000004674	-	67	49.412	Microcebus_murinus
ENSCSAVG00000010868	-	55	59.016	ENSMICG00000005046	SRSF7	55	67.857	Microcebus_murinus
ENSCSAVG00000010868	-	56	55.645	ENSMMOG00000005208	srsf7a	73	54.400	Mola_mola
ENSCSAVG00000010868	-	55	59.016	ENSMUSG00000024097	Srsf7	83	56.349	Mus_musculus
ENSCSAVG00000010868	-	80	40.341	ENSMLUG00000028921	-	74	50.926	Myotis_lucifugus
ENSCSAVG00000010868	-	55	55.738	ENSMLUG00000015692	-	51	53.175	Myotis_lucifugus
ENSCSAVG00000010868	-	56	55.645	ENSNBRG00000006601	srsf7a	72	54.400	Neolamprologus_brichardi
ENSCSAVG00000010868	-	55	59.016	ENSNLEG00000016349	SRSF7	83	56.349	Nomascus_leucogenys
ENSCSAVG00000010868	-	55	57.851	ENSMEUG00000000773	-	59	55.200	Notamacropus_eugenii
ENSCSAVG00000010868	-	55	59.016	ENSOPRG00000010234	SRSF7	54	56.204	Ochotona_princeps
ENSCSAVG00000010868	-	53	43.966	ENSODEG00000008570	-	55	44.538	Octodon_degus
ENSCSAVG00000010868	-	55	59.016	ENSPPAG00000017907	SRSF7	55	67.857	Pan_paniscus
ENSCSAVG00000010868	-	55	59.016	ENSPPRG00000003682	SRSF7	54	56.204	Panthera_pardus
ENSCSAVG00000010868	-	55	59.016	ENSPTIG00000006350	SRSF7	54	56.204	Panthera_tigris_altaica
ENSCSAVG00000010868	-	55	59.504	ENSPTRG00000011851	SRSF7	55	67.857	Pan_troglodytes
ENSCSAVG00000010868	-	55	59.016	ENSPANG00000018079	SRSF7	55	67.857	Papio_anubis
ENSCSAVG00000010868	-	55	59.836	ENSPKIG00000017425	srsf7b	65	57.143	Paramormyrops_kingsleyae
ENSCSAVG00000010868	-	55	57.377	ENSPKIG00000022669	SRSF7	77	54.762	Paramormyrops_kingsleyae
ENSCSAVG00000010868	-	55	59.016	ENSPSIG00000004636	-	50	56.349	Pelodiscus_sinensis
ENSCSAVG00000010868	-	71	37.342	ENSPMGG00000004040	srsf3b	64	55.000	Periophthalmus_magnuspinnatus
ENSCSAVG00000010868	-	66	50.685	ENSPMGG00000021890	srsf7a	80	53.600	Periophthalmus_magnuspinnatus
ENSCSAVG00000010868	-	59	53.030	ENSPMAG00000004472	srsf7a	55	51.667	Petromyzon_marinus
ENSCSAVG00000010868	-	55	59.016	ENSPCIG00000020694	-	83	56.349	Phascolarctos_cinereus
ENSCSAVG00000010868	-	55	57.377	ENSPCIG00000020726	-	84	54.762	Phascolarctos_cinereus
ENSCSAVG00000010868	-	71	41.401	ENSPLAG00000003715	srsf3b	64	58.750	Poecilia_latipinna
ENSCSAVG00000010868	-	71	41.401	ENSPMEG00000001983	srsf3b	64	58.750	Poecilia_mexicana
ENSCSAVG00000010868	-	62	55.147	ENSPREG00000020685	srsf7a	90	54.264	Poecilia_reticulata
ENSCSAVG00000010868	-	57	49.206	ENSPREG00000006149	srsf7b	52	52.000	Poecilia_reticulata
ENSCSAVG00000010868	-	55	59.016	ENSPCAG00000011348	SRSF7	50	56.349	Procavia_capensis
ENSCSAVG00000010868	-	55	58.197	ENSPCOG00000019422	-	53	55.556	Propithecus_coquereli
ENSCSAVG00000010868	-	57	52.800	ENSPCOG00000023721	-	71	50.794	Propithecus_coquereli
ENSCSAVG00000010868	-	55	59.016	ENSPVAG00000012076	SRSF7	54	56.204	Pteropus_vampyrus
ENSCSAVG00000010868	-	73	43.827	ENSPNAG00000012262	srsf3a	63	60.000	Pygocentrus_nattereri
ENSCSAVG00000010868	-	55	54.918	ENSPNAG00000000149	-	63	44.910	Pygocentrus_nattereri
ENSCSAVG00000010868	-	71	40.764	ENSPNAG00000010438	srsf3b	51	58.025	Pygocentrus_nattereri
ENSCSAVG00000010868	-	57	47.200	ENSRNOG00000008398	AABR07055789.1	69	49.231	Rattus_norvegicus
ENSCSAVG00000010868	-	55	59.504	ENSRBIG00000024695	SRSF7	55	67.857	Rhinopithecus_bieti
ENSCSAVG00000010868	-	55	59.016	ENSRROG00000005080	SRSF7	83	56.349	Rhinopithecus_roxellana
ENSCSAVG00000010868	-	50	43.636	ENSSBOG00000027102	-	60	53.012	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010868	-	55	59.016	ENSSBOG00000025074	SRSF7	83	56.349	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010868	-	55	59.504	ENSSHAG00000015970	-	82	56.349	Sarcophilus_harrisii
ENSCSAVG00000010868	-	55	56.911	ENSSFOG00015007348	SRSF7	54	54.676	Scleropages_formosus
ENSCSAVG00000010868	-	60	57.252	ENSSDUG00000021338	srsf7b	80	53.968	Seriola_dumerili
ENSCSAVG00000010868	-	57	57.600	ENSSLDG00000021463	srsf7b	64	56.000	Seriola_lalandi_dorsalis
ENSCSAVG00000010868	-	57	56.800	ENSSPAG00000017204	srsf7b	81	54.762	Stegastes_partitus
ENSCSAVG00000010868	-	59	53.846	ENSSPAG00000022192	srsf7a	88	54.400	Stegastes_partitus
ENSCSAVG00000010868	-	55	59.016	ENSSSCG00000008484	SRSF7	83	56.349	Sus_scrofa
ENSCSAVG00000010868	-	55	59.504	ENSTBEG00000004604	SRSF7	50	56.800	Tupaia_belangeri
ENSCSAVG00000010868	-	55	57.025	ENSTTRG00000014324	SRSF7	56	54.412	Tursiops_truncatus
ENSCSAVG00000010868	-	63	42.143	ENSUAMG00000018039	SRSF3	87	37.059	Ursus_americanus
ENSCSAVG00000010868	-	55	59.016	ENSUAMG00000025051	-	83	56.349	Ursus_americanus
ENSCSAVG00000010868	-	54	47.899	ENSUMAG00000023107	-	60	62.069	Ursus_maritimus
ENSCSAVG00000010868	-	55	59.504	ENSVPAG00000003316	SRSF7	50	56.800	Vicugna_pacos
ENSCSAVG00000010868	-	55	59.016	ENSVVUG00000018767	-	83	56.349	Vulpes_vulpes
ENSCSAVG00000010868	-	74	39.024	ENSVVUG00000006092	-	78	36.538	Vulpes_vulpes
ENSCSAVG00000010868	-	58	49.219	ENSXCOG00000010843	srsf7b	77	52.000	Xiphophorus_couchianus
ENSCSAVG00000010868	-	59	54.615	ENSXCOG00000009381	srsf7a	90	53.488	Xiphophorus_couchianus
ENSCSAVG00000010868	-	71	40.764	ENSXMAG00000001097	srsf3b	64	58.750	Xiphophorus_maculatus