EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCSAVG00000010904 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 6046 bases
Position: chrreftig_48:2685407-2691452
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018565	RNase_HII	PF01351.18	4.9e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018767	-	1044	-	ENSCSAVP00000018565	292 (aa)	-	H2ZLU9

Gene Model

Click here to download ENSCSAVG00000010904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010904's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000010904	-	100	51.333	ENSG00000104889	RNASEH2A	100	51.333	Homo_sapiens
ENSCSAVG00000010904	-	100	51.623	ENSAPOG00000004101	rnaseh2a	100	51.623	Acanthochromis_polyacanthus
ENSCSAVG00000010904	-	100	51.171	ENSAMEG00000012323	RNASEH2A	100	51.171	Ailuropoda_melanoleuca
ENSCSAVG00000010904	-	87	57.647	ENSACIG00000002658	rnaseh2a	100	57.647	Amphilophus_citrinellus
ENSCSAVG00000010904	-	100	50.974	ENSAOCG00000009217	rnaseh2a	100	50.974	Amphiprion_ocellaris
ENSCSAVG00000010904	-	100	50.974	ENSAPEG00000022937	rnaseh2a	100	50.974	Amphiprion_percula
ENSCSAVG00000010904	-	100	50.649	ENSATEG00000000908	rnaseh2a	100	50.649	Anabas_testudineus
ENSCSAVG00000010904	-	92	54.710	ENSACAG00000003338	RNASEH2A	92	54.710	Anolis_carolinensis
ENSCSAVG00000010904	-	88	43.866	ENSANAG00000037932	RNASEH2A	87	43.866	Aotus_nancymaae
ENSCSAVG00000010904	-	100	51.299	ENSACLG00000009169	rnaseh2a	100	51.299	Astatotilapia_calliptera
ENSCSAVG00000010904	-	100	45.000	ENSAMXG00000000436	rnaseh2a	100	45.000	Astyanax_mexicanus
ENSCSAVG00000010904	-	100	52.508	ENSBTAG00000009661	RNASEH2A	100	52.508	Bos_taurus
ENSCSAVG00000010904	-	85	48.425	WBGene00004383	rnh-2	85	48.425	Caenorhabditis_elegans
ENSCSAVG00000010904	-	100	50.667	ENSCJAG00000004873	RNASEH2A	100	50.667	Callithrix_jacchus
ENSCSAVG00000010904	-	100	51.839	ENSCAFG00000017159	RNASEH2A	100	51.839	Canis_familiaris
ENSCSAVG00000010904	-	100	51.839	ENSCAFG00020005190	RNASEH2A	60	51.839	Canis_lupus_dingo
ENSCSAVG00000010904	-	100	52.843	ENSCHIG00000014460	RNASEH2A	100	52.843	Capra_hircus
ENSCSAVG00000010904	-	100	51.163	ENSTSYG00000025418	RNASEH2A	100	51.163	Carlito_syrichta
ENSCSAVG00000010904	-	62	53.723	ENSCAPG00000003411	RNASEH2A	99	53.723	Cavia_aperea
ENSCSAVG00000010904	-	100	51.007	ENSCPOG00000038877	RNASEH2A	100	51.007	Cavia_porcellus
ENSCSAVG00000010904	-	100	51.667	ENSCCAG00000030453	RNASEH2A	100	51.667	Cebus_capucinus
ENSCSAVG00000010904	-	100	52.000	ENSCATG00000029609	RNASEH2A	100	52.000	Cercocebus_atys
ENSCSAVG00000010904	-	100	51.678	ENSCLAG00000014930	RNASEH2A	100	51.678	Chinchilla_lanigera
ENSCSAVG00000010904	-	100	52.000	ENSCSAG00000006567	RNASEH2A	100	52.000	Chlorocebus_sabaeus
ENSCSAVG00000010904	-	100	51.351	ENSCPBG00000023909	RNASEH2A	100	51.351	Chrysemys_picta_bellii
ENSCSAVG00000010904	-	100	77.397	ENSCING00000006190	-	100	77.397	Ciona_intestinalis
ENSCSAVG00000010904	-	100	51.333	ENSCANG00000027433	RNASEH2A	100	51.333	Colobus_angolensis_palliatus
ENSCSAVG00000010904	-	100	50.993	ENSCGRG00001005021	Rnaseh2a	100	50.993	Cricetulus_griseus_chok1gshd
ENSCSAVG00000010904	-	100	50.993	ENSCGRG00000016602	Rnaseh2a	100	50.993	Cricetulus_griseus_crigri
ENSCSAVG00000010904	-	98	51.000	ENSCSEG00000009842	rnaseh2a	98	51.000	Cynoglossus_semilaevis
ENSCSAVG00000010904	-	92	47.080	ENSCVAG00000021203	rnaseh2a	98	45.051	Cyprinodon_variegatus
ENSCSAVG00000010904	-	100	51.792	ENSDARG00000018891	rnaseh2a	100	51.792	Danio_rerio
ENSCSAVG00000010904	-	85	53.755	ENSDNOG00000036532	RNASEH2A	100	53.755	Dasypus_novemcinctus
ENSCSAVG00000010904	-	100	51.667	ENSDORG00000009008	Rnaseh2a	100	51.667	Dipodomys_ordii
ENSCSAVG00000010904	-	99	45.574	FBgn0031252	CG13690	88	45.574	Drosophila_melanogaster
ENSCSAVG00000010904	-	73	42.723	ENSETEG00000001956	-	100	42.723	Echinops_telfairi
ENSCSAVG00000010904	-	79	56.223	ENSEBUG00000003380	rnaseh2a	75	54.251	Eptatretus_burgeri
ENSCSAVG00000010904	-	88	55.253	ENSEASG00005004118	RNASEH2A	93	55.253	Equus_asinus_asinus
ENSCSAVG00000010904	-	100	50.836	ENSECAG00000007013	RNASEH2A	100	50.836	Equus_caballus
ENSCSAVG00000010904	-	100	49.664	ENSEEUG00000008222	RNASEH2A	100	49.664	Erinaceus_europaeus
ENSCSAVG00000010904	-	98	51.333	ENSELUG00000023079	rnaseh2a	96	52.033	Esox_lucius
ENSCSAVG00000010904	-	100	51.505	ENSFCAG00000000474	RNASEH2A	100	51.505	Felis_catus
ENSCSAVG00000010904	-	91	54.579	ENSFDAG00000003595	RNASEH2A	88	59.389	Fukomys_damarensis
ENSCSAVG00000010904	-	100	50.492	ENSFHEG00000007682	rnaseh2a	100	50.492	Fundulus_heteroclitus
ENSCSAVG00000010904	-	100	49.675	ENSGMOG00000005650	rnaseh2a	100	49.675	Gadus_morhua
ENSCSAVG00000010904	-	95	50.352	ENSGALG00000052002	RNASEH2A	69	50.352	Gallus_gallus
ENSCSAVG00000010904	-	98	52.174	ENSGAFG00000009624	rnaseh2a	98	52.174	Gambusia_affinis
ENSCSAVG00000010904	-	100	50.980	ENSGACG00000016019	rnaseh2a	100	50.980	Gasterosteus_aculeatus
ENSCSAVG00000010904	-	100	50.502	ENSGAGG00000013859	RNASEH2A	100	50.502	Gopherus_agassizii
ENSCSAVG00000010904	-	100	51.667	ENSGGOG00000005846	RNASEH2A	100	51.667	Gorilla_gorilla
ENSCSAVG00000010904	-	93	54.480	ENSHBUG00000005267	rnaseh2a	96	54.480	Haplochromis_burtoni
ENSCSAVG00000010904	-	100	50.502	ENSHGLG00000018801	RNASEH2A	100	50.502	Heterocephalus_glaber_female
ENSCSAVG00000010904	-	100	50.836	ENSHGLG00100015773	RNASEH2A	100	50.836	Heterocephalus_glaber_male
ENSCSAVG00000010904	-	100	52.131	ENSHCOG00000016593	rnaseh2a	100	52.131	Hippocampus_comes
ENSCSAVG00000010904	-	100	50.163	ENSIPUG00000024299	rnaseh2a	100	50.163	Ictalurus_punctatus
ENSCSAVG00000010904	-	100	52.174	ENSSTOG00000006224	RNASEH2A	99	55.294	Ictidomys_tridecemlineatus
ENSCSAVG00000010904	-	100	52.333	ENSJJAG00000017547	Rnaseh2a	100	52.333	Jaculus_jaculus
ENSCSAVG00000010904	-	100	50.492	ENSKMAG00000019829	rnaseh2a	100	50.492	Kryptolebias_marmoratus
ENSCSAVG00000010904	-	100	51.299	ENSLBEG00000020494	rnaseh2a	100	51.299	Labrus_bergylta
ENSCSAVG00000010904	-	87	48.235	ENSLACG00000007789	RNASEH2A	99	48.235	Latimeria_chalumnae
ENSCSAVG00000010904	-	100	52.117	ENSLOCG00000007890	rnaseh2a	99	52.117	Lepisosteus_oculatus
ENSCSAVG00000010904	-	100	51.342	ENSLAFG00000015571	RNASEH2A	100	51.342	Loxodonta_africana
ENSCSAVG00000010904	-	100	52.000	ENSMFAG00000002011	RNASEH2A	100	52.000	Macaca_fascicularis
ENSCSAVG00000010904	-	100	51.667	ENSMMUG00000005690	RNASEH2A	100	51.667	Macaca_mulatta
ENSCSAVG00000010904	-	100	52.000	ENSMNEG00000033054	RNASEH2A	100	52.000	Macaca_nemestrina
ENSCSAVG00000010904	-	100	52.000	ENSMLEG00000043654	RNASEH2A	100	52.000	Mandrillus_leucophaeus
ENSCSAVG00000010904	-	100	50.000	ENSMAMG00000003062	rnaseh2a	98	53.047	Mastacembelus_armatus
ENSCSAVG00000010904	-	100	50.974	ENSMZEG00005023857	rnaseh2a	100	50.974	Maylandia_zebra
ENSCSAVG00000010904	-	53	53.988	ENSMAUG00000021740	-	100	53.988	Mesocricetus_auratus
ENSCSAVG00000010904	-	100	51.495	ENSMICG00000016430	RNASEH2A	100	51.495	Microcebus_murinus
ENSCSAVG00000010904	-	100	51.163	ENSMOCG00000017408	Rnaseh2a	100	51.163	Microtus_ochrogaster
ENSCSAVG00000010904	-	87	57.647	ENSMMOG00000008447	rnaseh2a	100	57.647	Mola_mola
ENSCSAVG00000010904	-	100	49.186	ENSMODG00000006997	RNASEH2A	100	49.186	Monodelphis_domestica
ENSCSAVG00000010904	-	100	50.649	ENSMALG00000021607	rnaseh2a	100	52.734	Monopterus_albus
ENSCSAVG00000010904	-	100	37.667	MGP_CAROLIEiJ_G0031319	-	100	49.640	Mus_caroli
ENSCSAVG00000010904	-	100	50.831	ENSMUSG00000052926	Rnaseh2a	99	55.731	Mus_musculus
ENSCSAVG00000010904	-	100	50.836	MGP_PahariEiJ_G0022924	Rnaseh2a	99	55.731	Mus_pahari
ENSCSAVG00000010904	-	100	51.163	MGP_SPRETEiJ_G0032438	Rnaseh2a	100	51.163	Mus_spretus
ENSCSAVG00000010904	-	100	52.174	ENSMPUG00000004586	RNASEH2A	100	52.174	Mustela_putorius_furo
ENSCSAVG00000010904	-	100	52.508	ENSMLUG00000012723	RNASEH2A	100	52.508	Myotis_lucifugus
ENSCSAVG00000010904	-	100	52.667	ENSNGAG00000017988	Rnaseh2a	100	52.667	Nannospalax_galili
ENSCSAVG00000010904	-	100	51.299	ENSNBRG00000018731	rnaseh2a	100	51.299	Neolamprologus_brichardi
ENSCSAVG00000010904	-	100	51.667	ENSNLEG00000012806	RNASEH2A	100	51.667	Nomascus_leucogenys
ENSCSAVG00000010904	-	73	53.991	ENSMEUG00000006001	RNASEH2A	100	53.991	Notamacropus_eugenii
ENSCSAVG00000010904	-	92	46.545	ENSOPRG00000004811	RNASEH2A	93	46.545	Ochotona_princeps
ENSCSAVG00000010904	-	100	52.013	ENSODEG00000009772	RNASEH2A	100	52.013	Octodon_degus
ENSCSAVG00000010904	-	100	50.649	ENSONIG00000018033	rnaseh2a	99	50.649	Oreochromis_niloticus
ENSCSAVG00000010904	-	85	50.584	ENSOANG00000009079	RNASEH2A	86	50.584	Ornithorhynchus_anatinus
ENSCSAVG00000010904	-	100	51.307	ENSORLG00000004042	rnaseh2a	100	51.307	Oryzias_latipes
ENSCSAVG00000010904	-	100	51.307	ENSORLG00020009483	rnaseh2a	100	51.307	Oryzias_latipes_hni
ENSCSAVG00000010904	-	100	51.307	ENSORLG00015007548	rnaseh2a	100	51.307	Oryzias_latipes_hsok
ENSCSAVG00000010904	-	100	50.327	ENSOMEG00000016454	rnaseh2a	96	55.422	Oryzias_melastigma
ENSCSAVG00000010904	-	100	50.498	ENSOGAG00000012214	RNASEH2A	100	50.498	Otolemur_garnettii
ENSCSAVG00000010904	-	100	52.843	ENSOARG00000010721	RNASEH2A	100	52.843	Ovis_aries
ENSCSAVG00000010904	-	100	51.667	ENSPPAG00000028092	RNASEH2A	100	51.667	Pan_paniscus
ENSCSAVG00000010904	-	100	51.839	ENSPPRG00000010585	RNASEH2A	100	51.839	Panthera_pardus
ENSCSAVG00000010904	-	100	51.839	ENSPTIG00000013366	RNASEH2A	100	51.839	Panthera_tigris_altaica
ENSCSAVG00000010904	-	100	51.667	ENSPTRG00000010542	RNASEH2A	100	51.667	Pan_troglodytes
ENSCSAVG00000010904	-	100	52.000	ENSPANG00000034495	RNASEH2A	100	52.000	Papio_anubis
ENSCSAVG00000010904	-	100	50.495	ENSPKIG00000009756	rnaseh2a	100	50.495	Paramormyrops_kingsleyae
ENSCSAVG00000010904	-	64	52.062	ENSPSIG00000012039	RNASEH2A	100	52.062	Pelodiscus_sinensis
ENSCSAVG00000010904	-	87	56.863	ENSPMGG00000023392	rnaseh2a	100	56.863	Periophthalmus_magnuspinnatus
ENSCSAVG00000010904	-	100	50.993	ENSPEMG00000018009	Rnaseh2a	100	50.993	Peromyscus_maniculatus_bairdii
ENSCSAVG00000010904	-	98	50.000	ENSPMAG00000009060	rnaseh2a	98	51.000	Petromyzon_marinus
ENSCSAVG00000010904	-	100	49.837	ENSPCIG00000014119	RNASEH2A	100	49.837	Phascolarctos_cinereus
ENSCSAVG00000010904	-	100	50.164	ENSPFOG00000012627	rnaseh2a	100	49.675	Poecilia_formosa
ENSCSAVG00000010904	-	66	48.058	ENSPLAG00000018723	-	90	48.058	Poecilia_latipinna
ENSCSAVG00000010904	-	87	55.686	ENSPLAG00000015901	rnaseh2a	100	55.686	Poecilia_latipinna
ENSCSAVG00000010904	-	66	49.029	ENSPMEG00000009032	-	93	49.029	Poecilia_mexicana
ENSCSAVG00000010904	-	87	56.471	ENSPMEG00000000647	rnaseh2a	100	56.471	Poecilia_mexicana
ENSCSAVG00000010904	-	100	48.693	ENSPREG00000015015	rnaseh2a	100	48.693	Poecilia_reticulata
ENSCSAVG00000010904	-	100	50.498	ENSPPYG00000009608	RNASEH2A	100	50.498	Pongo_abelii
ENSCSAVG00000010904	-	100	52.013	ENSPCAG00000015319	RNASEH2A	100	52.013	Procavia_capensis
ENSCSAVG00000010904	-	100	50.667	ENSPCOG00000003686	RNASEH2A	100	50.667	Propithecus_coquereli
ENSCSAVG00000010904	-	99	42.088	ENSPVAG00000014703	RNASEH2A	99	42.088	Pteropus_vampyrus
ENSCSAVG00000010904	-	100	47.249	ENSPNYG00000023986	rnaseh2a	100	47.249	Pundamilia_nyererei
ENSCSAVG00000010904	-	100	50.654	ENSPNAG00000021017	rnaseh2a	100	50.654	Pygocentrus_nattereri
ENSCSAVG00000010904	-	100	50.831	ENSRNOG00000003504	Rnaseh2a	100	50.831	Rattus_norvegicus
ENSCSAVG00000010904	-	100	52.000	ENSRBIG00000023554	RNASEH2A	100	52.000	Rhinopithecus_bieti
ENSCSAVG00000010904	-	100	52.000	ENSRROG00000043799	RNASEH2A	100	52.000	Rhinopithecus_roxellana
ENSCSAVG00000010904	-	78	42.259	YNL072W	RNH201	77	42.259	Saccharomyces_cerevisiae
ENSCSAVG00000010904	-	100	51.000	ENSSBOG00000033164	RNASEH2A	100	51.000	Saimiri_boliviensis_boliviensis
ENSCSAVG00000010904	-	100	47.896	ENSSHAG00000015552	RNASEH2A	100	47.896	Sarcophilus_harrisii
ENSCSAVG00000010904	-	100	51.148	ENSSFOG00015009692	rnaseh2a	100	51.148	Scleropages_formosus
ENSCSAVG00000010904	-	89	55.556	ENSSMAG00000013986	rnaseh2a	89	55.556	Scophthalmus_maximus
ENSCSAVG00000010904	-	89	55.556	ENSSDUG00000005280	rnaseh2a	89	55.556	Seriola_dumerili
ENSCSAVG00000010904	-	100	50.000	ENSSLDG00000023766	rnaseh2a	100	50.000	Seriola_lalandi_dorsalis
ENSCSAVG00000010904	-	100	51.299	ENSSPAG00000012769	rnaseh2a	100	51.299	Stegastes_partitus
ENSCSAVG00000010904	-	100	51.163	ENSSSCG00000013737	RNASEH2A	100	51.163	Sus_scrofa
ENSCSAVG00000010904	-	100	50.323	ENSTRUG00000000049	rnaseh2a	100	50.968	Takifugu_rubripes
ENSCSAVG00000010904	-	100	50.000	ENSTNIG00000004533	rnaseh2a	99	50.000	Tetraodon_nigroviridis
ENSCSAVG00000010904	-	73	53.991	ENSTTRG00000003592	RNASEH2A	100	53.991	Tursiops_truncatus
ENSCSAVG00000010904	-	100	51.505	ENSUAMG00000019593	RNASEH2A	100	51.505	Ursus_americanus
ENSCSAVG00000010904	-	79	55.603	ENSUMAG00000006254	-	73	55.603	Ursus_maritimus
ENSCSAVG00000010904	-	98	52.542	ENSXETG00000004762	rnaseh2a	97	52.542	Xenopus_tropicalis
ENSCSAVG00000010904	-	100	51.148	ENSXCOG00000013485	rnaseh2a	100	51.148	Xiphophorus_couchianus
ENSCSAVG00000010904	-	100	50.820	ENSXMAG00000006953	rnaseh2a	100	50.820	Xiphophorus_maculatus