EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCSAVG00000010981 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Ciona_savignyi
Status
putative
Strand
Plus strand
Length
19086 bases
Position
chrreftig_48:2887099-2906184
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCSAVP00000018685IBN_NPF03810.192.1e-1711
ENSCSAVP00000018683IBN_NPF03810.194.1e-1711
ENSCSAVP00000018684IBN_NPF03810.194.8e-1711
ENSCSAVP00000018686IBN_NPF03810.195.4e-1711
ENSCSAVP00000018687IBN_NPF03810.191.5e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCSAVT00000018892-2580-ENSCSAVP00000018687859 (aa)-H2ZM71
ENSCSAVT00000018890-1962-ENSCSAVP00000018685652 (aa)-H2ZM69
ENSCSAVT00000018891-2796-ENSCSAVP00000018686931 (aa)-H2ZM70
ENSCSAVT00000018889-3313-ENSCSAVP00000018684893 (aa)-H2ZM68
ENSCSAVT00000018888-2385-ENSCSAVP00000018683795 (aa)-H2ZM67
Gene Model
Click here to download ENSCSAVG00000010981's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000010981's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCSAVG00000010981-9975.421ENSG00000083312TNPO110076.166Homo_sapiens
ENSCSAVG00000010981-9976.094ENSAPOG00000003453tnpo19976.655Acanthochromis_polyacanthus
ENSCSAVG00000010981-9974.638ENSAMEG00000007147TNPO19974.750Ailuropoda_melanoleuca
ENSCSAVG00000010981-9972.124ENSACIG00000003711tnpo19975.871Amphilophus_citrinellus
ENSCSAVG00000010981-9976.094ENSAOCG00000008154tnpo19976.655Amphiprion_ocellaris
ENSCSAVG00000010981-9976.094ENSAPEG00000001112tnpo19976.655Amphiprion_percula
ENSCSAVG00000010981-9976.094ENSATEG00000010408tnpo19976.431Anabas_testudineus
ENSCSAVG00000010981-9972.758ENSAPLG00000009619-9972.534Anas_platyrhynchos
ENSCSAVG00000010981-9975.533ENSACAG00000009599TNPO19975.758Anolis_carolinensis
ENSCSAVG00000010981-9975.196ENSANAG00000022453-9975.196Aotus_nancymaae
ENSCSAVG00000010981-9968.616ENSANAG00000025351-9968.616Aotus_nancymaae
ENSCSAVG00000010981-9949.275ENSANAG00000027118-9950.836Aotus_nancymaae
ENSCSAVG00000010981-9975.084ENSACLG00000027223tnpo19975.084Astatotilapia_calliptera
ENSCSAVG00000010981-9976.148ENSAMXG00000009842tnpo19976.148Astyanax_mexicanus
ENSCSAVG00000010981-9975.533ENSBTAG00000007979TNPO19975.533Bos_taurus
ENSCSAVG00000010981-9975.196ENSCJAG00000016409TNPO19975.196Callithrix_jacchus
ENSCSAVG00000010981-9675.174ENSCAFG00000008081TNPO110075.174Canis_familiaris
ENSCSAVG00000010981-9973.625ENSCAFG00020017397TNPO19973.625Canis_lupus_dingo
ENSCSAVG00000010981-9975.421ENSCHIG00000023462TNPO19975.421Capra_hircus
ENSCSAVG00000010981-9972.809ENSTSYG00000001871TNPO19874.306Carlito_syrichta
ENSCSAVG00000010981-9975.084ENSCCAG00000026472TNPO19975.084Cebus_capucinus
ENSCSAVG00000010981-9975.421ENSCATG00000043792TNPO19975.421Cercocebus_atys
ENSCSAVG00000010981-9975.084ENSCLAG00000016191TNPO19975.084Chinchilla_lanigera
ENSCSAVG00000010981-9975.421ENSCSAG00000015616TNPO19975.421Chlorocebus_sabaeus
ENSCSAVG00000010981-9963.569ENSCHOG00000001746TNPO19966.548Choloepus_hoffmanni
ENSCSAVG00000010981-9975.533ENSCPBG00000000260TNPO19475.645Chrysemys_picta_bellii
ENSCSAVG00000010981-9975.421ENSCANG00000004353TNPO19975.421Colobus_angolensis_palliatus
ENSCSAVG00000010981-9975.421ENSCGRG00001016580Tnpo19975.758Cricetulus_griseus_chok1gshd
ENSCSAVG00000010981-9675.349ENSCGRG00000010366Tnpo110075.698Cricetulus_griseus_crigri
ENSCSAVG00000010981-9975.758ENSCSEG00000012674tnpo19975.982Cynoglossus_semilaevis
ENSCSAVG00000010981-9976.319ENSCVAG00000001010tnpo19976.543Cyprinodon_variegatus
ENSCSAVG00000010981-9976.009ENSDARG00000035390tnpo19976.009Danio_rerio
ENSCSAVG00000010981-9971.812ENSDNOG00000006647TNPO19971.812Dasypus_novemcinctus
ENSCSAVG00000010981-9774.313ENSDORG00000006476Tnpo110074.700Dipodomys_ordii
ENSCSAVG00000010981-10055.388FBgn0035693CG82199955.272Drosophila_melanogaster
ENSCSAVG00000010981-8676.030ENSETEG00000017805TNPO18976.030Echinops_telfairi
ENSCSAVG00000010981-9672.957ENSEBUG00000001895tnpo110073.191Eptatretus_burgeri
ENSCSAVG00000010981-9975.421ENSEASG00005018055TNPO19975.421Equus_asinus_asinus
ENSCSAVG00000010981-9975.421ENSECAG00000024424TNPO19975.421Equus_caballus
ENSCSAVG00000010981-9969.730ENSELUG00000002821tnpo19970.511Esox_lucius
ENSCSAVG00000010981-9975.421ENSFCAG00000013181TNPO19975.421Felis_catus
ENSCSAVG00000010981-9975.645ENSFALG00000010292TNPO19975.870Ficedula_albicollis
ENSCSAVG00000010981-9975.196ENSFDAG00000013345TNPO19975.196Fukomys_damarensis
ENSCSAVG00000010981-9975.897ENSFHEG00000019234tnpo19975.897Fundulus_heteroclitus
ENSCSAVG00000010981-9973.503ENSGMOG00000000347tnpo19974.273Gadus_morhua
ENSCSAVG00000010981-9974.860ENSGALG00000015014TNPO19975.421Gallus_gallus
ENSCSAVG00000010981-9976.148ENSGAFG00000000943tnpo19976.148Gambusia_affinis
ENSCSAVG00000010981-9975.758ENSGACG00000015841tnpo19975.982Gasterosteus_aculeatus
ENSCSAVG00000010981-9975.421ENSGAGG00000013419TNPO19975.533Gopherus_agassizii
ENSCSAVG00000010981-9975.421ENSGGOG00000026800TNPO19975.421Gorilla_gorilla
ENSCSAVG00000010981-9963.892ENSGGOG00000022535-9863.892Gorilla_gorilla
ENSCSAVG00000010981-9975.421ENSHBUG00000008068tnpo19976.094Haplochromis_burtoni
ENSCSAVG00000010981-9975.084ENSHGLG00000000970-9975.084Heterocephalus_glaber_female
ENSCSAVG00000010981-9674.913ENSHGLG00100017090-9974.913Heterocephalus_glaber_male
ENSCSAVG00000010981-9659.814ENSHGLG00100000963-9859.698Heterocephalus_glaber_male
ENSCSAVG00000010981-9975.309ENSJJAG00000010244Tnpo19675.758Jaculus_jaculus
ENSCSAVG00000010981-9975.645ENSKMAG00000018195tnpo19975.870Kryptolebias_marmoratus
ENSCSAVG00000010981-9970.845ENSLBEG00000009521tnpo19673.276Labrus_bergylta
ENSCSAVG00000010981-9672.486ENSLACG00000012199TNPO110072.486Latimeria_chalumnae
ENSCSAVG00000010981-9974.972ENSLOCG00000011092tnpo19776.094Lepisosteus_oculatus
ENSCSAVG00000010981-9774.856ENSLAFG00000011796TNPO110074.856Loxodonta_africana
ENSCSAVG00000010981-9975.421ENSMFAG00000003636TNPO19975.421Macaca_fascicularis
ENSCSAVG00000010981-9975.421ENSMMUG00000020923TNPO19975.421Macaca_mulatta
ENSCSAVG00000010981-9975.421ENSMNEG00000044581TNPO19975.421Macaca_nemestrina
ENSCSAVG00000010981-9975.421ENSMLEG00000030740TNPO19975.421Mandrillus_leucophaeus
ENSCSAVG00000010981-9976.094ENSMAMG00000001357tnpo19976.431Mastacembelus_armatus
ENSCSAVG00000010981-9976.094ENSMZEG00005004913tnpo19976.094Maylandia_zebra
ENSCSAVG00000010981-9975.421ENSMAUG00000020550Tnpo19975.758Mesocricetus_auratus
ENSCSAVG00000010981-9973.660ENSMICG00000008468TNPO19972.503Microcebus_murinus
ENSCSAVG00000010981-9975.421ENSMOCG00000009301Tnpo19875.758Microtus_ochrogaster
ENSCSAVG00000010981-9971.324ENSMMOG00000005551tnpo19975.161Mola_mola
ENSCSAVG00000010981-9977.953ENSMODG00000001721TNPO18276.582Monodelphis_domestica
ENSCSAVG00000010981-9975.084ENSMALG00000009782tnpo19975.645Monopterus_albus
ENSCSAVG00000010981-9975.533MGP_CAROLIEiJ_G0018826Tnpo19975.866Mus_caroli
ENSCSAVG00000010981-9975.421ENSMUSG00000009470Tnpo19975.866Mus_musculus
ENSCSAVG00000010981-9975.533MGP_PahariEiJ_G0015901Tnpo19975.990Mus_pahari
ENSCSAVG00000010981-9975.309MGP_SPRETEiJ_G0019708Tnpo19975.743Mus_spretus
ENSCSAVG00000010981-9975.421ENSMPUG00000014387TNPO19975.421Mustela_putorius_furo
ENSCSAVG00000010981-9675.116ENSMLUG00000016317TNPO110075.116Myotis_lucifugus
ENSCSAVG00000010981-9975.421ENSNGAG00000021263Tnpo19975.758Nannospalax_galili
ENSCSAVG00000010981-9972.124ENSNBRG00000009998tnpo19975.871Neolamprologus_brichardi
ENSCSAVG00000010981-9975.421ENSNLEG00000004572TNPO19975.421Nomascus_leucogenys
ENSCSAVG00000010981-9171.400ENSOPRG00000012390TNPO18971.400Ochotona_princeps
ENSCSAVG00000010981-9974.860ENSODEG00000001771TNPO19974.860Octodon_degus
ENSCSAVG00000010981-9974.916ENSONIG00000011151tnpo19975.585Oreochromis_niloticus
ENSCSAVG00000010981-9275.515ENSOANG00000015785TNPO110075.636Ornithorhynchus_anatinus
ENSCSAVG00000010981-9670.547ENSOCUG00000013318TNPO110070.314Oryctolagus_cuniculus
ENSCSAVG00000010981-10071.912ENSORLG00000003182tnpo19975.676Oryzias_latipes
ENSCSAVG00000010981-9976.596ENSORLG00020011559tnpo110076.596Oryzias_latipes_hni
ENSCSAVG00000010981-9975.924ENSORLG00015019113tnpo110076.484Oryzias_latipes_hsok
ENSCSAVG00000010981-9976.372ENSOMEG00000014567tnpo110076.708Oryzias_melastigma
ENSCSAVG00000010981-9975.421ENSOGAG00000000808TNPO19975.421Otolemur_garnettii
ENSCSAVG00000010981-9975.533ENSOARG00000005038TNPO18375.533Ovis_aries
ENSCSAVG00000010981-9975.421ENSPPAG00000042518TNPO19975.421Pan_paniscus
ENSCSAVG00000010981-9975.421ENSPPRG00000022336TNPO19975.421Panthera_pardus
ENSCSAVG00000010981-9975.421ENSPTIG00000018839TNPO19975.421Panthera_tigris_altaica
ENSCSAVG00000010981-9975.421ENSPTRG00000016972TNPO19975.421Pan_troglodytes
ENSCSAVG00000010981-9965.476ENSPTRG00000047731-9967.355Pan_troglodytes
ENSCSAVG00000010981-9975.421ENSPANG00000006074TNPO19975.421Papio_anubis
ENSCSAVG00000010981-9972.615ENSPKIG00000019795tnpo19972.727Paramormyrops_kingsleyae
ENSCSAVG00000010981-9975.533ENSPSIG00000014366TNPO19975.758Pelodiscus_sinensis
ENSCSAVG00000010981-9975.618ENSPMGG00000017014tnpo19975.618Periophthalmus_magnuspinnatus
ENSCSAVG00000010981-9972.394ENSPEMG00000007444Tnpo110075.698Peromyscus_maniculatus_bairdii
ENSCSAVG00000010981-9975.645ENSPCIG00000026080TNPO19975.645Phascolarctos_cinereus
ENSCSAVG00000010981-9975.499ENSPFOG00000011447tnpo19976.286Poecilia_formosa
ENSCSAVG00000010981-9975.499ENSPLAG00000018696tnpo19976.286Poecilia_latipinna
ENSCSAVG00000010981-9976.655ENSPMEG00000024121tnpo19976.880Poecilia_mexicana
ENSCSAVG00000010981-9976.260ENSPREG00000020705tnpo19976.260Poecilia_reticulata
ENSCSAVG00000010981-9975.309ENSPPYG00000015545TNPO19975.309Pongo_abelii
ENSCSAVG00000010981-9975.421ENSPCOG00000004254TNPO19975.421Propithecus_coquereli
ENSCSAVG00000010981-9975.533ENSPVAG00000013051TNPO19975.533Pteropus_vampyrus
ENSCSAVG00000010981-9975.224ENSPNYG00000001522tnpo19975.224Pundamilia_nyererei
ENSCSAVG00000010981-9975.812ENSPNAG00000021484tnpo19975.812Pygocentrus_nattereri
ENSCSAVG00000010981-9975.533ENSRNOG00000014999Tnpo19975.645Rattus_norvegicus
ENSCSAVG00000010981-9975.421ENSRBIG00000021642TNPO19975.421Rhinopithecus_bieti
ENSCSAVG00000010981-9975.421ENSRROG00000035271TNPO19975.421Rhinopithecus_roxellana
ENSCSAVG00000010981-9975.196ENSSBOG00000029256TNPO19975.196Saimiri_boliviensis_boliviensis
ENSCSAVG00000010981-9675.698ENSSHAG00000007120TNPO19975.698Sarcophilus_harrisii
ENSCSAVG00000010981-9976.121ENSSFOG00015015448tnpo19976.121Scleropages_formosus
ENSCSAVG00000010981-9675.842ENSSMAG00000011202tnpo19776.190Scophthalmus_maximus
ENSCSAVG00000010981-9975.982ENSSDUG00000007943tnpo19976.543Seriola_dumerili
ENSCSAVG00000010981-9975.982ENSSLDG00000014578tnpo19976.543Seriola_lalandi_dorsalis
ENSCSAVG00000010981-9975.196ENSSPUG00000000149TNPO19975.421Sphenodon_punctatus
ENSCSAVG00000010981-9976.094ENSSPAG00000000258tnpo19976.655Stegastes_partitus
ENSCSAVG00000010981-9975.421ENSSSCG00000027293TNPO19975.421Sus_scrofa
ENSCSAVG00000010981-9974.000ENSTGUG00000005729TNPO19974.222Taeniopygia_guttata
ENSCSAVG00000010981-9976.207ENSTRUG00000018491tnpo19976.207Takifugu_rubripes
ENSCSAVG00000010981-8870.083ENSTNIG00000007483tnpo19873.597Tetraodon_nigroviridis
ENSCSAVG00000010981-8880.000ENSTBEG00000007848TNPO18680.000Tupaia_belangeri
ENSCSAVG00000010981-9672.093ENSTTRG00000000209TNPO19572.093Tursiops_truncatus
ENSCSAVG00000010981-9975.421ENSUMAG00000007635TNPO19975.421Ursus_maritimus
ENSCSAVG00000010981-9972.166ENSVPAG00000009601TNPO19972.166Vicugna_pacos
ENSCSAVG00000010981-9975.421ENSVVUG00000007338TNPO19975.421Vulpes_vulpes
ENSCSAVG00000010981-9975.141ENSXETG00000016812tnpo19974.578Xenopus_tropicalis
ENSCSAVG00000010981-9976.345ENSXMAG00000005440tnpo19976.233Xiphophorus_maculatus

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