EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011041 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 4960 bases
Position: chrreftig_48:2937282-2942241
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018792	eIF2A	PF08662.11	3.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000018998	-	1297	-	ENSCSAVP00000018792	316 (aa)	-	H2ZMH6

Gene Model

Click here to download ENSCSAVG00000011041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011041's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011041	-	71	30.736	ENSCSAVG00000002027	-	53	30.736
ENSCSAVG00000011041	-	94	30.000	ENSCSAVG00000008477	-	82	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011041	-	99	66.246	ENSG00000051596	THOC3	84	74.468	Homo_sapiens
ENSCSAVG00000011041	-	99	68.254	ENSAPOG00000010591	thoc3	98	68.254	Acanthochromis_polyacanthus
ENSCSAVG00000011041	-	99	66.246	ENSAMEG00000006936	THOC3	90	66.246	Ailuropoda_melanoleuca
ENSCSAVG00000011041	-	99	69.206	ENSACIG00000010364	thoc3	98	69.206	Amphilophus_citrinellus
ENSCSAVG00000011041	-	99	67.937	ENSAOCG00000013548	thoc3	98	67.937	Amphiprion_ocellaris
ENSCSAVG00000011041	-	99	67.937	ENSAPEG00000003216	thoc3	98	67.937	Amphiprion_percula
ENSCSAVG00000011041	-	99	68.889	ENSATEG00000017937	thoc3	98	68.889	Anabas_testudineus
ENSCSAVG00000011041	-	99	66.246	ENSANAG00000036291	THOC3	90	66.246	Aotus_nancymaae
ENSCSAVG00000011041	-	99	68.889	ENSACLG00000017219	thoc3	98	68.889	Astatotilapia_calliptera
ENSCSAVG00000011041	-	99	67.619	ENSAMXG00000010750	thoc3	98	67.619	Astyanax_mexicanus
ENSCSAVG00000011041	-	99	66.246	ENSBTAG00000035174	THOC3	90	66.246	Bos_taurus
ENSCSAVG00000011041	-	99	65.931	ENSCJAG00000046031	THOC3	85	65.931	Callithrix_jacchus
ENSCSAVG00000011041	-	99	66.246	ENSCAFG00000014320	THOC3	90	66.246	Canis_familiaris
ENSCSAVG00000011041	-	99	66.246	ENSCAFG00020011477	THOC3	90	66.246	Canis_lupus_dingo
ENSCSAVG00000011041	-	99	66.246	ENSCHIG00000021665	THOC3	90	66.246	Capra_hircus
ENSCSAVG00000011041	-	97	50.323	ENSTSYG00000009507	-	91	51.290	Carlito_syrichta
ENSCSAVG00000011041	-	99	52.848	ENSCPOG00000025805	THOC3	88	55.696	Cavia_porcellus
ENSCSAVG00000011041	-	99	66.246	ENSCATG00000029038	THOC3	90	66.246	Cercocebus_atys
ENSCSAVG00000011041	-	99	66.139	ENSCLAG00000015924	THOC3	90	66.139	Chinchilla_lanigera
ENSCSAVG00000011041	-	99	66.246	ENSCSAG00000009454	THOC3	90	66.246	Chlorocebus_sabaeus
ENSCSAVG00000011041	-	83	68.182	ENSCPBG00000022672	THOC3	81	68.182	Chrysemys_picta_bellii
ENSCSAVG00000011041	-	99	66.246	ENSCANG00000008964	THOC3	90	66.246	Colobus_angolensis_palliatus
ENSCSAVG00000011041	-	99	66.246	ENSCGRG00001022944	Thoc3	83	66.246	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011041	-	99	66.246	ENSCGRG00000012133	Thoc3	90	66.246	Cricetulus_griseus_crigri
ENSCSAVG00000011041	-	99	68.254	ENSCVAG00000006941	thoc3	98	68.254	Cyprinodon_variegatus
ENSCSAVG00000011041	-	99	66.667	ENSDARG00000056517	thoc3	98	66.667	Danio_rerio
ENSCSAVG00000011041	-	99	66.246	ENSDNOG00000037214	THOC3	90	66.246	Dasypus_novemcinctus
ENSCSAVG00000011041	-	80	69.141	ENSDORG00000014084	Thoc3	87	69.141	Dipodomys_ordii
ENSCSAVG00000011041	-	98	60.577	FBgn0037569	tex	98	60.577	Drosophila_melanogaster
ENSCSAVG00000011041	-	98	65.924	ENSETEG00000020137	THOC3	89	65.924	Echinops_telfairi
ENSCSAVG00000011041	-	99	66.144	ENSEBUG00000004516	thoc3	98	66.144	Eptatretus_burgeri
ENSCSAVG00000011041	-	99	66.246	ENSEASG00005011970	THOC3	90	66.246	Equus_asinus_asinus
ENSCSAVG00000011041	-	99	66.246	ENSECAG00000011555	THOC3	90	66.246	Equus_caballus
ENSCSAVG00000011041	-	99	68.254	ENSELUG00000022058	thoc3	98	68.254	Esox_lucius
ENSCSAVG00000011041	-	99	66.562	ENSFALG00000008536	THOC3	94	66.562	Ficedula_albicollis
ENSCSAVG00000011041	-	99	66.139	ENSFDAG00000015062	THOC3	90	66.139	Fukomys_damarensis
ENSCSAVG00000011041	-	99	69.841	ENSFHEG00000019958	thoc3	98	69.841	Fundulus_heteroclitus
ENSCSAVG00000011041	-	99	67.937	ENSGMOG00000019136	-	98	67.937	Gadus_morhua
ENSCSAVG00000011041	-	98	65.605	ENSGALG00000024172	THOC3	82	65.605	Gallus_gallus
ENSCSAVG00000011041	-	99	69.524	ENSGAFG00000016531	thoc3	95	69.524	Gambusia_affinis
ENSCSAVG00000011041	-	99	68.254	ENSGACG00000016353	thoc3	98	68.254	Gasterosteus_aculeatus
ENSCSAVG00000011041	-	99	66.246	ENSGAGG00000013237	THOC3	98	66.246	Gopherus_agassizii
ENSCSAVG00000011041	-	99	66.246	ENSGGOG00000012127	-	90	66.246	Gorilla_gorilla
ENSCSAVG00000011041	-	99	68.889	ENSHBUG00000023812	thoc3	98	68.889	Haplochromis_burtoni
ENSCSAVG00000011041	-	99	65.931	ENSHGLG00000008773	THOC3	90	65.931	Heterocephalus_glaber_female
ENSCSAVG00000011041	-	99	65.931	ENSHGLG00100013354	THOC3	90	65.931	Heterocephalus_glaber_male
ENSCSAVG00000011041	-	98	68.153	ENSHCOG00000003522	thoc3	98	68.153	Hippocampus_comes
ENSCSAVG00000011041	-	99	67.619	ENSIPUG00000001292	thoc3	93	67.619	Ictalurus_punctatus
ENSCSAVG00000011041	-	99	65.300	ENSJJAG00000010704	Thoc3	90	65.300	Jaculus_jaculus
ENSCSAVG00000011041	-	99	68.571	ENSKMAG00000017815	thoc3	98	68.571	Kryptolebias_marmoratus
ENSCSAVG00000011041	-	99	67.937	ENSLBEG00000006512	thoc3	98	67.937	Labrus_bergylta
ENSCSAVG00000011041	-	99	66.877	ENSLACG00000014556	THOC3	98	66.877	Latimeria_chalumnae
ENSCSAVG00000011041	-	98	68.471	ENSLOCG00000011610	thoc3	97	68.471	Lepisosteus_oculatus
ENSCSAVG00000011041	-	99	65.931	ENSLAFG00000016609	THOC3	90	65.931	Loxodonta_africana
ENSCSAVG00000011041	-	99	66.246	ENSMFAG00000034476	THOC3	90	66.246	Macaca_fascicularis
ENSCSAVG00000011041	-	99	66.246	ENSMMUG00000018737	THOC3	90	66.246	Macaca_mulatta
ENSCSAVG00000011041	-	99	66.246	ENSMNEG00000043023	THOC3	90	66.246	Macaca_nemestrina
ENSCSAVG00000011041	-	99	66.246	ENSMLEG00000002508	THOC3	90	66.246	Mandrillus_leucophaeus
ENSCSAVG00000011041	-	100	68.025	ENSMAMG00000013229	thoc3	100	68.025	Mastacembelus_armatus
ENSCSAVG00000011041	-	99	68.889	ENSMZEG00005020327	thoc3	98	68.889	Maylandia_zebra
ENSCSAVG00000011041	-	83	68.061	ENSMGAG00000004766	THOC3	99	68.061	Meleagris_gallopavo
ENSCSAVG00000011041	-	99	66.246	ENSMAUG00000011225	Thoc3	90	66.246	Mesocricetus_auratus
ENSCSAVG00000011041	-	99	57.729	ENSMICG00000031354	-	90	57.729	Microcebus_murinus
ENSCSAVG00000011041	-	99	65.931	ENSMICG00000028441	-	90	65.931	Microcebus_murinus
ENSCSAVG00000011041	-	99	66.246	ENSMOCG00000015290	Thoc3	90	66.246	Microtus_ochrogaster
ENSCSAVG00000011041	-	99	68.889	ENSMMOG00000000373	thoc3	98	68.889	Mola_mola
ENSCSAVG00000011041	-	99	66.246	ENSMODG00000005339	THOC3	90	66.246	Monodelphis_domestica
ENSCSAVG00000011041	-	99	60.635	ENSMODG00000025275	-	96	60.635	Monodelphis_domestica
ENSCSAVG00000011041	-	99	68.571	ENSMALG00000002645	thoc3	98	68.571	Monopterus_albus
ENSCSAVG00000011041	-	99	66.246	MGP_CAROLIEiJ_G0018534	Thoc3	90	66.246	Mus_caroli
ENSCSAVG00000011041	-	99	66.246	ENSMUSG00000025872	Thoc3	90	66.246	Mus_musculus
ENSCSAVG00000011041	-	99	66.246	MGP_PahariEiJ_G0019599	Thoc3	90	66.246	Mus_pahari
ENSCSAVG00000011041	-	99	66.246	MGP_SPRETEiJ_G0019414	Thoc3	90	66.246	Mus_spretus
ENSCSAVG00000011041	-	91	62.543	ENSMPUG00000012598	THOC3	82	62.543	Mustela_putorius_furo
ENSCSAVG00000011041	-	99	63.407	ENSMLUG00000026903	-	92	63.407	Myotis_lucifugus
ENSCSAVG00000011041	-	98	65.287	ENSMLUG00000027411	-	92	65.287	Myotis_lucifugus
ENSCSAVG00000011041	-	99	66.246	ENSMLUG00000005412	-	90	66.246	Myotis_lucifugus
ENSCSAVG00000011041	-	99	66.246	ENSNGAG00000010934	-	90	66.246	Nannospalax_galili
ENSCSAVG00000011041	-	99	68.889	ENSNBRG00000013917	thoc3	92	68.889	Neolamprologus_brichardi
ENSCSAVG00000011041	-	99	65.931	ENSNLEG00000000593	THOC3	90	65.931	Nomascus_leucogenys
ENSCSAVG00000011041	-	99	66.246	ENSMEUG00000001068	THOC3	91	66.246	Notamacropus_eugenii
ENSCSAVG00000011041	-	98	57.325	ENSMEUG00000013439	-	97	57.325	Notamacropus_eugenii
ENSCSAVG00000011041	-	99	66.139	ENSODEG00000010186	THOC3	90	66.139	Octodon_degus
ENSCSAVG00000011041	-	99	69.206	ENSONIG00000004291	thoc3	98	69.206	Oreochromis_niloticus
ENSCSAVG00000011041	-	99	66.246	ENSOCUG00000016387	THOC3	90	66.246	Oryctolagus_cuniculus
ENSCSAVG00000011041	-	99	68.889	ENSORLG00000030384	thoc3	90	68.889	Oryzias_latipes
ENSCSAVG00000011041	-	99	68.889	ENSORLG00020016372	thoc3	98	68.889	Oryzias_latipes_hni
ENSCSAVG00000011041	-	99	68.889	ENSORLG00015000336	thoc3	98	68.889	Oryzias_latipes_hsok
ENSCSAVG00000011041	-	99	68.571	ENSOMEG00000021977	thoc3	98	68.571	Oryzias_melastigma
ENSCSAVG00000011041	-	99	66.246	ENSOGAG00000003503	THOC3	90	66.246	Otolemur_garnettii
ENSCSAVG00000011041	-	99	65.615	ENSOARG00000016600	THOC3	90	65.615	Ovis_aries
ENSCSAVG00000011041	-	99	66.246	ENSPPAG00000006020	THOC3	90	66.246	Pan_paniscus
ENSCSAVG00000011041	-	99	66.246	ENSPPRG00000020316	THOC3	90	66.246	Panthera_pardus
ENSCSAVG00000011041	-	80	69.531	ENSPTIG00000011325	THOC3	73	69.531	Panthera_tigris_altaica
ENSCSAVG00000011041	-	99	66.246	ENSPTRG00000017594	THOC3	90	66.246	Pan_troglodytes
ENSCSAVG00000011041	-	99	66.246	ENSPANG00000012114	THOC3	90	66.246	Papio_anubis
ENSCSAVG00000011041	-	99	66.984	ENSPKIG00000000208	thoc3	98	66.984	Paramormyrops_kingsleyae
ENSCSAVG00000011041	-	98	67.516	ENSPMGG00000017949	thoc3	98	67.516	Periophthalmus_magnuspinnatus
ENSCSAVG00000011041	-	99	66.246	ENSPEMG00000003118	Thoc3	90	66.246	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011041	-	98	70.382	ENSPMAG00000007069	thoc3	98	70.382	Petromyzon_marinus
ENSCSAVG00000011041	-	99	69.206	ENSPFOG00000007685	thoc3	90	69.206	Poecilia_formosa
ENSCSAVG00000011041	-	99	69.206	ENSPLAG00000003581	thoc3	95	69.206	Poecilia_latipinna
ENSCSAVG00000011041	-	99	69.206	ENSPMEG00000005565	thoc3	95	69.206	Poecilia_mexicana
ENSCSAVG00000011041	-	99	69.206	ENSPREG00000014916	thoc3	90	69.206	Poecilia_reticulata
ENSCSAVG00000011041	-	99	66.246	ENSPPYG00000016066	THOC3	90	66.246	Pongo_abelii
ENSCSAVG00000011041	-	99	66.246	ENSPCOG00000023245	THOC3	90	66.246	Propithecus_coquereli
ENSCSAVG00000011041	-	99	65.931	ENSPVAG00000012450	THOC3	90	65.931	Pteropus_vampyrus
ENSCSAVG00000011041	-	99	68.889	ENSPNYG00000016612	thoc3	98	68.889	Pundamilia_nyererei
ENSCSAVG00000011041	-	99	67.302	ENSPNAG00000005252	thoc3	98	67.302	Pygocentrus_nattereri
ENSCSAVG00000011041	-	99	66.246	ENSRNOG00000000104	Thoc3	90	66.246	Rattus_norvegicus
ENSCSAVG00000011041	-	99	66.246	ENSRBIG00000039571	THOC3	90	66.246	Rhinopithecus_bieti
ENSCSAVG00000011041	-	99	66.246	ENSRROG00000031032	THOC3	90	66.246	Rhinopithecus_roxellana
ENSCSAVG00000011041	-	99	66.246	ENSSBOG00000022663	THOC3	90	66.246	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011041	-	98	59.744	ENSSHAG00000013075	-	89	59.744	Sarcophilus_harrisii
ENSCSAVG00000011041	-	98	65.605	ENSSHAG00000010757	THOC3	88	65.605	Sarcophilus_harrisii
ENSCSAVG00000011041	-	98	68.790	ENSSFOG00015001867	thoc3	91	68.790	Scleropages_formosus
ENSCSAVG00000011041	-	99	69.524	ENSSMAG00000006786	thoc3	98	69.524	Scophthalmus_maximus
ENSCSAVG00000011041	-	99	68.889	ENSSDUG00000008924	thoc3	98	68.889	Seriola_dumerili
ENSCSAVG00000011041	-	99	68.889	ENSSLDG00000019128	thoc3	98	68.889	Seriola_lalandi_dorsalis
ENSCSAVG00000011041	-	99	67.192	ENSSPUG00000006652	THOC3	98	67.192	Sphenodon_punctatus
ENSCSAVG00000011041	-	99	68.571	ENSSPAG00000014229	thoc3	98	68.571	Stegastes_partitus
ENSCSAVG00000011041	-	99	66.246	ENSSSCG00000014061	THOC3	90	66.246	Sus_scrofa
ENSCSAVG00000011041	-	97	65.161	ENSTGUG00000000557	THOC3	98	65.161	Taeniopygia_guttata
ENSCSAVG00000011041	-	99	67.619	ENSTRUG00000002925	thoc3	91	67.619	Takifugu_rubripes
ENSCSAVG00000011041	-	99	67.302	ENSTNIG00000012958	thoc3	98	67.302	Tetraodon_nigroviridis
ENSCSAVG00000011041	-	80	69.531	ENSTTRG00000014865	THOC3	98	69.531	Tursiops_truncatus
ENSCSAVG00000011041	-	99	66.246	ENSUAMG00000010691	THOC3	90	66.246	Ursus_americanus
ENSCSAVG00000011041	-	99	66.246	ENSUMAG00000024511	THOC3	92	66.246	Ursus_maritimus
ENSCSAVG00000011041	-	99	68.652	ENSXETG00000022316	thoc3	99	68.652	Xenopus_tropicalis
ENSCSAVG00000011041	-	99	69.206	ENSXCOG00000001378	thoc3	98	69.206	Xiphophorus_couchianus
ENSCSAVG00000011041	-	99	69.206	ENSXMAG00000003232	thoc3	95	69.206	Xiphophorus_maculatus