EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 8996 bases
Position: chrreftig_64:31860-40855
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018811	ResIII	PF04851.15	5.5e-06	1	1
ENSCSAVP00000018811	DEAD	PF00270.29	4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019017	-	2048	-	ENSCSAVP00000018811	575 (aa)	-	H2ZMJ5

Gene Model

Click here to download ENSCSAVG00000011052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011052	-	71	34.023	ENSCSAVG00000004094	-	99	34.023
ENSCSAVG00000011052	-	98	53.833	ENSCSAVG00000007521	-	98	53.833

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011052	-	89	45.543	ENSG00000004700	RECQL	95	42.328	Homo_sapiens
ENSCSAVG00000011052	-	99	41.115	ENSAMEG00000016233	RECQL	87	41.115	Ailuropoda_melanoleuca
ENSCSAVG00000011052	-	99	41.397	ENSACIG00000020781	recql	90	41.397	Amphilophus_citrinellus
ENSCSAVG00000011052	-	89	44.747	ENSAOCG00000010244	recql	91	41.216	Amphiprion_ocellaris
ENSCSAVG00000011052	-	89	44.402	ENSAPEG00000002040	recql	79	44.402	Amphiprion_percula
ENSCSAVG00000011052	-	99	41.837	ENSATEG00000023342	recql	90	41.852	Anabas_testudineus
ENSCSAVG00000011052	-	99	43.826	ENSAPLG00000003404	RECQL	87	43.826	Anas_platyrhynchos
ENSCSAVG00000011052	-	77	48.758	ENSACAG00000017383	RECQL	98	48.758	Anolis_carolinensis
ENSCSAVG00000011052	-	99	42.683	ENSANAG00000035372	RECQL	87	42.683	Aotus_nancymaae
ENSCSAVG00000011052	-	99	41.809	ENSACLG00000021416	recql	90	40.226	Astatotilapia_calliptera
ENSCSAVG00000011052	-	99	41.941	ENSAMXG00000014249	recql	86	41.941	Astyanax_mexicanus
ENSCSAVG00000011052	-	99	42.509	ENSBTAG00000021083	RECQL	87	42.509	Bos_taurus
ENSCSAVG00000011052	-	99	43.643	WBGene00019334	K02F3.12	93	43.643	Caenorhabditis_elegans
ENSCSAVG00000011052	-	99	42.683	ENSCJAG00000044420	RECQL	87	42.683	Callithrix_jacchus
ENSCSAVG00000011052	-	99	41.638	ENSCAFG00000012221	RECQL	87	41.638	Canis_familiaris
ENSCSAVG00000011052	-	99	41.638	ENSCAFG00020007872	RECQL	87	41.638	Canis_lupus_dingo
ENSCSAVG00000011052	-	99	42.160	ENSCHIG00000024281	RECQL	89	42.160	Capra_hircus
ENSCSAVG00000011052	-	99	42.857	ENSTSYG00000009224	RECQL	87	42.857	Carlito_syrichta
ENSCSAVG00000011052	-	99	41.986	ENSCPOG00000024644	RECQL	87	41.986	Cavia_porcellus
ENSCSAVG00000011052	-	99	42.334	ENSCCAG00000028085	RECQL	87	42.334	Cebus_capucinus
ENSCSAVG00000011052	-	89	45.543	ENSCATG00000036038	RECQL	89	42.370	Cercocebus_atys
ENSCSAVG00000011052	-	99	41.986	ENSCLAG00000014618	RECQL	87	41.986	Chinchilla_lanigera
ENSCSAVG00000011052	-	89	45.543	ENSCSAG00000007974	RECQL	87	42.509	Chlorocebus_sabaeus
ENSCSAVG00000011052	-	87	40.401	ENSCHOG00000002452	RECQL	76	40.401	Choloepus_hoffmanni
ENSCSAVG00000011052	-	99	43.902	ENSCPBG00000009109	RECQL	86	43.902	Chrysemys_picta_bellii
ENSCSAVG00000011052	-	100	72.617	ENSCING00000004012	-	92	73.993	Ciona_intestinalis
ENSCSAVG00000011052	-	89	45.155	ENSCANG00000035259	RECQL	87	42.160	Colobus_angolensis_palliatus
ENSCSAVG00000011052	-	99	42.683	ENSCGRG00001015141	Recql	87	42.683	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011052	-	99	42.683	ENSCGRG00000003545	Recql	87	42.683	Cricetulus_griseus_crigri
ENSCSAVG00000011052	-	98	39.966	ENSCSEG00000015932	recql	91	40.652	Cynoglossus_semilaevis
ENSCSAVG00000011052	-	99	41.237	ENSCVAG00000014613	recql	90	41.237	Cyprinodon_variegatus
ENSCSAVG00000011052	-	99	40.690	ENSDARG00000007175	recql	89	40.690	Danio_rerio
ENSCSAVG00000011052	-	81	47.548	ENSDNOG00000013557	RECQL	96	47.548	Dasypus_novemcinctus
ENSCSAVG00000011052	-	99	41.986	ENSDORG00000015884	Recql	94	40.127	Dipodomys_ordii
ENSCSAVG00000011052	-	98	38.986	ENSETEG00000018631	-	87	38.986	Echinops_telfairi
ENSCSAVG00000011052	-	99	42.361	ENSEASG00005014041	RECQL	90	45.684	Equus_asinus_asinus
ENSCSAVG00000011052	-	99	43.031	ENSECAG00000024762	RECQL	78	43.031	Equus_caballus
ENSCSAVG00000011052	-	90	44.253	ENSELUG00000011528	recql	90	41.227	Esox_lucius
ENSCSAVG00000011052	-	99	41.812	ENSFCAG00000030888	RECQL	87	41.812	Felis_catus
ENSCSAVG00000011052	-	97	42.679	ENSFALG00000002635	RECQL	86	42.679	Ficedula_albicollis
ENSCSAVG00000011052	-	99	41.986	ENSFDAG00000019693	RECQL	87	41.986	Fukomys_damarensis
ENSCSAVG00000011052	-	99	42.215	ENSFHEG00000014563	recql	88	42.215	Fundulus_heteroclitus
ENSCSAVG00000011052	-	88	39.139	ENSGMOG00000010504	recql	99	39.139	Gadus_morhua
ENSCSAVG00000011052	-	99	43.728	ENSGALG00000013174	RECQL	85	43.728	Gallus_gallus
ENSCSAVG00000011052	-	89	44.163	ENSGACG00000001005	recql	84	44.163	Gasterosteus_aculeatus
ENSCSAVG00000011052	-	99	42.683	ENSGAGG00000025428	RECQL	86	42.683	Gopherus_agassizii
ENSCSAVG00000011052	-	89	45.349	ENSGGOG00000010985	RECQL	87	42.334	Gorilla_gorilla
ENSCSAVG00000011052	-	99	41.809	ENSHBUG00000001341	recql	90	42.491	Haplochromis_burtoni
ENSCSAVG00000011052	-	99	42.509	ENSHGLG00000009712	RECQL	88	42.509	Heterocephalus_glaber_female
ENSCSAVG00000011052	-	99	42.683	ENSHGLG00100015306	RECQL	88	42.683	Heterocephalus_glaber_male
ENSCSAVG00000011052	-	99	43.154	ENSHCOG00000012735	recql	90	43.154	Hippocampus_comes
ENSCSAVG00000011052	-	89	44.380	ENSIPUG00000024092	recql	89	38.907	Ictalurus_punctatus
ENSCSAVG00000011052	-	99	39.547	ENSSTOG00000006328	RECQL	87	39.547	Ictidomys_tridecemlineatus
ENSCSAVG00000011052	-	99	40.767	ENSJJAG00000017339	Recql	94	40.767	Jaculus_jaculus
ENSCSAVG00000011052	-	99	40.572	ENSKMAG00000011232	recql	89	40.747	Kryptolebias_marmoratus
ENSCSAVG00000011052	-	89	43.411	ENSLBEG00000023652	recql	78	43.411	Labrus_bergylta
ENSCSAVG00000011052	-	99	43.911	ENSLACG00000011482	RECQL	88	43.911	Latimeria_chalumnae
ENSCSAVG00000011052	-	99	35.223	ENSLOCG00000015393	recql	88	35.223	Lepisosteus_oculatus
ENSCSAVG00000011052	-	99	42.683	ENSLAFG00000000963	RECQL	87	42.683	Loxodonta_africana
ENSCSAVG00000011052	-	89	45.349	ENSMFAG00000031470	RECQL	87	42.334	Macaca_fascicularis
ENSCSAVG00000011052	-	89	45.349	ENSMMUG00000010857	RECQL	87	42.334	Macaca_mulatta
ENSCSAVG00000011052	-	89	45.349	ENSMNEG00000031827	RECQL	87	42.334	Macaca_nemestrina
ENSCSAVG00000011052	-	89	45.155	ENSMLEG00000039659	RECQL	94	42.160	Mandrillus_leucophaeus
ENSCSAVG00000011052	-	89	46.124	ENSMAMG00000023289	recql	89	43.077	Mastacembelus_armatus
ENSCSAVG00000011052	-	99	41.809	ENSMZEG00005016027	recql	90	42.491	Maylandia_zebra
ENSCSAVG00000011052	-	99	44.077	ENSMGAG00000013629	RECQL	85	44.077	Meleagris_gallopavo
ENSCSAVG00000011052	-	99	37.306	ENSMAUG00000010642	Recql	94	40.127	Mesocricetus_auratus
ENSCSAVG00000011052	-	99	44.348	ENSMICG00000002664	RECQL	87	44.348	Microcebus_murinus
ENSCSAVG00000011052	-	99	42.683	ENSMOCG00000007093	Recql	89	42.683	Microtus_ochrogaster
ENSCSAVG00000011052	-	97	41.338	ENSMMOG00000007279	recql	90	41.509	Mola_mola
ENSCSAVG00000011052	-	99	42.832	ENSMODG00000017805	RECQL	87	42.832	Monodelphis_domestica
ENSCSAVG00000011052	-	89	43.217	ENSMALG00000004415	recql	90	40.068	Monopterus_albus
ENSCSAVG00000011052	-	99	42.509	MGP_CAROLIEiJ_G0029030	Recql	94	40.127	Mus_caroli
ENSCSAVG00000011052	-	99	42.334	ENSMUSG00000030243	Recql	94	39.490	Mus_musculus
ENSCSAVG00000011052	-	99	42.857	MGP_PahariEiJ_G0022791	Recql	94	42.038	Mus_pahari
ENSCSAVG00000011052	-	99	42.334	MGP_SPRETEiJ_G0030085	Recql	96	41.615	Mus_spretus
ENSCSAVG00000011052	-	99	41.812	ENSMPUG00000000202	RECQL	87	41.812	Mustela_putorius_furo
ENSCSAVG00000011052	-	99	42.509	ENSMLUG00000005741	RECQL	87	42.509	Myotis_lucifugus
ENSCSAVG00000011052	-	94	35.450	ENSNGAG00000020417	-	81	35.450	Nannospalax_galili
ENSCSAVG00000011052	-	99	43.902	ENSNGAG00000010997	-	87	43.902	Nannospalax_galili
ENSCSAVG00000011052	-	99	41.809	ENSNBRG00000020825	recql	91	42.491	Neolamprologus_brichardi
ENSCSAVG00000011052	-	89	45.349	ENSNLEG00000004797	RECQL	87	42.334	Nomascus_leucogenys
ENSCSAVG00000011052	-	99	43.031	ENSOPRG00000007493	RECQL	94	43.031	Ochotona_princeps
ENSCSAVG00000011052	-	99	41.638	ENSODEG00000010240	RECQL	92	41.638	Octodon_degus
ENSCSAVG00000011052	-	99	41.809	ENSONIG00000001694	recql	90	42.491	Oreochromis_niloticus
ENSCSAVG00000011052	-	60	33.616	ENSOANG00000021930	-	100	34.203	Ornithorhynchus_anatinus
ENSCSAVG00000011052	-	99	42.683	ENSOCUG00000008787	RECQL	87	42.683	Oryctolagus_cuniculus
ENSCSAVG00000011052	-	99	40.504	ENSORLG00000012853	recql	91	39.806	Oryzias_latipes
ENSCSAVG00000011052	-	99	40.641	ENSORLG00020020245	recql	91	41.327	Oryzias_latipes_hni
ENSCSAVG00000011052	-	99	40.641	ENSORLG00015018708	recql	91	41.327	Oryzias_latipes_hsok
ENSCSAVG00000011052	-	89	43.822	ENSOMEG00000019484	recql	91	40.917	Oryzias_melastigma
ENSCSAVG00000011052	-	99	42.783	ENSOGAG00000004754	RECQL	87	42.783	Otolemur_garnettii
ENSCSAVG00000011052	-	99	42.334	ENSOARG00000020343	RECQL	87	42.334	Ovis_aries
ENSCSAVG00000011052	-	89	45.349	ENSPPAG00000030306	RECQL	80	45.349	Pan_paniscus
ENSCSAVG00000011052	-	99	41.638	ENSPPRG00000010371	RECQL	87	41.638	Panthera_pardus
ENSCSAVG00000011052	-	99	41.638	ENSPTIG00000008593	RECQL	87	41.638	Panthera_tigris_altaica
ENSCSAVG00000011052	-	89	45.349	ENSPTRG00000004758	RECQL	86	42.334	Pan_troglodytes
ENSCSAVG00000011052	-	89	45.543	ENSPANG00000003394	RECQL	87	42.509	Papio_anubis
ENSCSAVG00000011052	-	99	41.753	ENSPKIG00000008072	recql	88	41.753	Paramormyrops_kingsleyae
ENSCSAVG00000011052	-	99	42.509	ENSPSIG00000002979	RECQL	85	42.509	Pelodiscus_sinensis
ENSCSAVG00000011052	-	89	45.174	ENSPMGG00000011010	recql	89	41.638	Periophthalmus_magnuspinnatus
ENSCSAVG00000011052	-	99	42.783	ENSPEMG00000016418	Recql	93	42.783	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011052	-	100	41.267	ENSPMAG00000005495	recql	95	41.267	Petromyzon_marinus
ENSCSAVG00000011052	-	89	45.736	ENSPCIG00000022452	RECQL	86	43.206	Phascolarctos_cinereus
ENSCSAVG00000011052	-	99	41.451	ENSPFOG00000000940	recql	86	41.451	Poecilia_formosa
ENSCSAVG00000011052	-	99	41.278	ENSPLAG00000006194	recql	86	41.278	Poecilia_latipinna
ENSCSAVG00000011052	-	99	41.451	ENSPMEG00000013399	recql	86	41.451	Poecilia_mexicana
ENSCSAVG00000011052	-	89	43.992	ENSPREG00000012991	recql	79	43.992	Poecilia_reticulata
ENSCSAVG00000011052	-	89	45.155	ENSPPYG00000004352	RECQL	78	45.155	Pongo_abelii
ENSCSAVG00000011052	-	94	42.407	ENSPCOG00000027353	RECQL	86	42.407	Propithecus_coquereli
ENSCSAVG00000011052	-	89	45.825	ENSPVAG00000002457	RECQL	78	45.825	Pteropus_vampyrus
ENSCSAVG00000011052	-	99	41.980	ENSPNYG00000016013	recql	90	42.662	Pundamilia_nyererei
ENSCSAVG00000011052	-	89	44.380	ENSPNAG00000029317	recql	79	44.380	Pygocentrus_nattereri
ENSCSAVG00000011052	-	99	42.509	ENSRNOG00000012602	Recql	90	44.872	Rattus_norvegicus
ENSCSAVG00000011052	-	89	45.349	ENSRBIG00000034966	RECQL	87	42.334	Rhinopithecus_bieti
ENSCSAVG00000011052	-	89	45.349	ENSRROG00000010234	RECQL	87	42.334	Rhinopithecus_roxellana
ENSCSAVG00000011052	-	99	42.509	ENSSBOG00000005645	RECQL	87	42.509	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011052	-	89	45.155	ENSSHAG00000015815	RECQL	87	42.509	Sarcophilus_harrisii
ENSCSAVG00000011052	-	99	41.237	ENSSFOG00015002537	recql	88	41.237	Scleropages_formosus
ENSCSAVG00000011052	-	89	43.495	ENSSMAG00000014910	recql	90	40.238	Scophthalmus_maximus
ENSCSAVG00000011052	-	89	44.186	ENSSDUG00000019205	recql	90	40.917	Seriola_dumerili
ENSCSAVG00000011052	-	97	40.101	ENSSLDG00000013921	recql	90	40.271	Seriola_lalandi_dorsalis
ENSCSAVG00000011052	-	89	38.150	ENSSPUG00000018613	RECQL	87	36.937	Sphenodon_punctatus
ENSCSAVG00000011052	-	89	43.470	ENSSPAG00000008384	recql	88	36.348	Stegastes_partitus
ENSCSAVG00000011052	-	99	42.857	ENSSSCG00000000580	RECQL	86	45.417	Sus_scrofa
ENSCSAVG00000011052	-	99	42.981	ENSTGUG00000011730	RECQL	86	42.981	Taeniopygia_guttata
ENSCSAVG00000011052	-	88	45.010	ENSTRUG00000000534	recql	88	45.155	Takifugu_rubripes
ENSCSAVG00000011052	-	88	44.553	ENSTNIG00000007242	recql	90	41.087	Tetraodon_nigroviridis
ENSCSAVG00000011052	-	78	43.681	ENSTBEG00000004653	RECQL	68	43.681	Tupaia_belangeri
ENSCSAVG00000011052	-	87	40.401	ENSTTRG00000003296	RECQL	76	40.401	Tursiops_truncatus
ENSCSAVG00000011052	-	89	43.992	ENSUAMG00000003261	RECQL	79	43.992	Ursus_americanus
ENSCSAVG00000011052	-	99	41.115	ENSUMAG00000001523	RECQL	87	41.115	Ursus_maritimus
ENSCSAVG00000011052	-	88	45.597	ENSVPAG00000007546	RECQL	77	45.597	Vicugna_pacos
ENSCSAVG00000011052	-	99	41.463	ENSVVUG00000001101	RECQL	87	41.463	Vulpes_vulpes
ENSCSAVG00000011052	-	78	44.176	ENSXETG00000013524	recql	86	44.176	Xenopus_tropicalis
ENSCSAVG00000011052	-	89	43.798	ENSXMAG00000029316	recql	88	41.278	Xiphophorus_maculatus