EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCSAVG00000011071 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Ciona_savignyi
Status: putative
Strand: Plus strand
Length: 5674 bases
Position: chrreftig_64:92468-98141
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCSAVP00000018844	PTS_2-RNA	PF01885.16	7.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCSAVT00000019050	-	1368	-	ENSCSAVP00000018844	315 (aa)	-	H2ZMM8

Gene Model

Click here to download ENSCSAVG00000011071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCSAVG00000011071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCSAVG00000011071	-	64	42.593	ENSCSAVG00000003949	-	97	42.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCSAVG00000011071	-	64	41.546	ENSG00000149743	TRPT1	95	39.130	Homo_sapiens
ENSCSAVG00000011071	-	60	44.845	ENSAPOG00000012925	trpt1	87	43.842	Acanthochromis_polyacanthus
ENSCSAVG00000011071	-	60	44.330	ENSAMEG00000018040	TRPT1	81	43.269	Ailuropoda_melanoleuca
ENSCSAVG00000011071	-	60	44.330	ENSACIG00000022413	trpt1	90	43.415	Amphilophus_citrinellus
ENSCSAVG00000011071	-	60	45.876	ENSAOCG00000001163	trpt1	76	44.828	Amphiprion_ocellaris
ENSCSAVG00000011071	-	60	45.876	ENSAPEG00000009873	trpt1	88	44.828	Amphiprion_percula
ENSCSAVG00000011071	-	60	45.596	ENSATEG00000014371	trpt1	88	43.842	Anabas_testudineus
ENSCSAVG00000011071	-	61	43.077	ENSACAG00000000696	TRPT1	88	42.574	Anolis_carolinensis
ENSCSAVG00000011071	-	64	42.995	ENSANAG00000019580	TRPT1	94	37.727	Aotus_nancymaae
ENSCSAVG00000011071	-	60	43.005	ENSACLG00000016893	trpt1	87	41.872	Astatotilapia_calliptera
ENSCSAVG00000011071	-	67	42.009	ENSAMXG00000010533	trpt1	87	43.000	Astyanax_mexicanus
ENSCSAVG00000011071	-	73	39.574	ENSBTAG00000016555	TRPT1	79	43.636	Bos_taurus
ENSCSAVG00000011071	-	61	44.162	ENSCJAG00000018169	TRPT1	76	44.162	Callithrix_jacchus
ENSCSAVG00000011071	-	60	44.271	ENSCAFG00000014591	TRPT1	82	42.654	Canis_familiaris
ENSCSAVG00000011071	-	60	44.271	ENSCAFG00020014101	TRPT1	85	42.654	Canis_lupus_dingo
ENSCSAVG00000011071	-	64	42.308	ENSCHIG00000021308	TRPT1	81	42.308	Capra_hircus
ENSCSAVG00000011071	-	51	46.341	ENSTSYG00000026766	TRPT1	88	42.857	Carlito_syrichta
ENSCSAVG00000011071	-	63	42.788	ENSCAPG00000016934	TRPT1	85	42.788	Cavia_aperea
ENSCSAVG00000011071	-	64	42.857	ENSCPOG00000002923	TRPT1	82	42.857	Cavia_porcellus
ENSCSAVG00000011071	-	51	45.732	ENSCCAG00000025683	TRPT1	81	45.732	Cebus_capucinus
ENSCSAVG00000011071	-	64	41.627	ENSCATG00000031563	TRPT1	81	41.627	Cercocebus_atys
ENSCSAVG00000011071	-	64	42.029	ENSCLAG00000016380	TRPT1	81	42.029	Chinchilla_lanigera
ENSCSAVG00000011071	-	64	42.308	ENSCSAG00000006952	TRPT1	81	42.308	Chlorocebus_sabaeus
ENSCSAVG00000011071	-	56	63.128	ENSCING00000002405	-	97	63.128	Ciona_intestinalis
ENSCSAVG00000011071	-	60	45.876	ENSCING00000024241	-	83	44.608	Ciona_intestinalis
ENSCSAVG00000011071	-	64	42.584	ENSCANG00000042980	TRPT1	81	42.584	Colobus_angolensis_palliatus
ENSCSAVG00000011071	-	65	40.952	ENSCGRG00001008474	Trpt1	83	40.952	Cricetulus_griseus_chok1gshd
ENSCSAVG00000011071	-	65	40.952	ENSCGRG00000009793	Trpt1	83	40.952	Cricetulus_griseus_crigri
ENSCSAVG00000011071	-	65	42.925	ENSCSEG00000005840	trpt1	94	41.629	Cynoglossus_semilaevis
ENSCSAVG00000011071	-	64	42.718	ENSCVAG00000006318	trpt1	94	42.718	Cyprinodon_variegatus
ENSCSAVG00000011071	-	61	44.670	ENSDARG00000037628	trpt1	88	44.279	Danio_rerio
ENSCSAVG00000011071	-	69	34.513	ENSDNOG00000044923	TRPT1	79	34.513	Dasypus_novemcinctus
ENSCSAVG00000011071	-	70	40.529	ENSDORG00000001624	Trpt1	91	40.529	Dipodomys_ordii
ENSCSAVG00000011071	-	59	36.788	FBgn0053057	CG33057	88	36.788	Drosophila_melanogaster
ENSCSAVG00000011071	-	65	44.907	ENSEBUG00000012569	-	88	48.214	Eptatretus_burgeri
ENSCSAVG00000011071	-	63	42.857	ENSEASG00005019983	TRPT1	79	42.857	Equus_asinus_asinus
ENSCSAVG00000011071	-	63	42.365	ENSECAG00000009917	TRPT1	82	43.850	Equus_caballus
ENSCSAVG00000011071	-	67	41.935	ENSEEUG00000012739	TRPT1	85	41.935	Erinaceus_europaeus
ENSCSAVG00000011071	-	60	43.005	ENSELUG00000007385	trpt1	83	43.005	Esox_lucius
ENSCSAVG00000011071	-	64	41.546	ENSFCAG00000024621	TRPT1	79	43.636	Felis_catus
ENSCSAVG00000011071	-	68	40.367	ENSFDAG00000002738	TRPT1	85	40.367	Fukomys_damarensis
ENSCSAVG00000011071	-	63	41.827	ENSFHEG00000002434	trpt1	93	40.930	Fundulus_heteroclitus
ENSCSAVG00000011071	-	64	37.379	ENSGMOG00000008716	trpt1	99	37.379	Gadus_morhua
ENSCSAVG00000011071	-	60	43.455	ENSGALG00000050256	TRPT1	63	43.455	Gallus_gallus
ENSCSAVG00000011071	-	60	43.077	ENSGAFG00000016762	trpt1	91	41.748	Gambusia_affinis
ENSCSAVG00000011071	-	63	41.951	ENSGACG00000016927	trpt1	90	42.771	Gasterosteus_aculeatus
ENSCSAVG00000011071	-	64	42.029	ENSGGOG00000012163	TRPT1	81	42.029	Gorilla_gorilla
ENSCSAVG00000011071	-	60	43.523	ENSHBUG00000012772	trpt1	87	42.365	Haplochromis_burtoni
ENSCSAVG00000011071	-	64	40.580	ENSHGLG00000013748	TRPT1	81	40.580	Heterocephalus_glaber_female
ENSCSAVG00000011071	-	64	40.580	ENSHGLG00100013048	TRPT1	81	40.580	Heterocephalus_glaber_male
ENSCSAVG00000011071	-	66	38.967	ENSHCOG00000000218	trpt1	87	39.512	Hippocampus_comes
ENSCSAVG00000011071	-	61	40.609	ENSIPUG00000002573	trpt1	85	40.609	Ictalurus_punctatus
ENSCSAVG00000011071	-	64	40.097	ENSSTOG00000014285	TRPT1	81	40.097	Ictidomys_tridecemlineatus
ENSCSAVG00000011071	-	64	42.995	ENSJJAG00000010855	Trpt1	81	42.995	Jaculus_jaculus
ENSCSAVG00000011071	-	65	42.180	ENSKMAG00000004214	trpt1	88	43.902	Kryptolebias_marmoratus
ENSCSAVG00000011071	-	60	42.487	ENSLBEG00000005640	trpt1	90	40.670	Labrus_bergylta
ENSCSAVG00000011071	-	60	46.632	ENSLACG00000016922	TRPT1	88	43.721	Latimeria_chalumnae
ENSCSAVG00000011071	-	63	40.594	ENSLOCG00000001345	trpt1	84	40.000	Lepisosteus_oculatus
ENSCSAVG00000011071	-	63	41.827	ENSLAFG00000009075	TRPT1	81	41.827	Loxodonta_africana
ENSCSAVG00000011071	-	64	41.627	ENSMFAG00000036828	TRPT1	81	41.627	Macaca_fascicularis
ENSCSAVG00000011071	-	64	42.029	ENSMMUG00000012940	TRPT1	81	42.029	Macaca_mulatta
ENSCSAVG00000011071	-	64	41.627	ENSMNEG00000033348	TRPT1	81	41.627	Macaca_nemestrina
ENSCSAVG00000011071	-	64	41.627	ENSMLEG00000031438	TRPT1	81	41.627	Mandrillus_leucophaeus
ENSCSAVG00000011071	-	60	45.361	ENSMAMG00000021617	trpt1	87	44.335	Mastacembelus_armatus
ENSCSAVG00000011071	-	60	43.523	ENSMZEG00005004773	trpt1	87	42.365	Maylandia_zebra
ENSCSAVG00000011071	-	50	44.444	ENSMAUG00000014107	Trpt1	77	44.444	Mesocricetus_auratus
ENSCSAVG00000011071	-	64	42.512	ENSMICG00000016950	TRPT1	81	42.512	Microcebus_murinus
ENSCSAVG00000011071	-	65	42.381	ENSMOCG00000021342	Trpt1	83	42.381	Microtus_ochrogaster
ENSCSAVG00000011071	-	60	42.487	ENSMMOG00000002896	trpt1	86	41.379	Mola_mola
ENSCSAVG00000011071	-	65	41.706	ENSMODG00000010226	TRPT1	95	41.706	Monodelphis_domestica
ENSCSAVG00000011071	-	60	43.005	ENSMALG00000012208	trpt1	81	42.365	Monopterus_albus
ENSCSAVG00000011071	-	65	40.000	MGP_CAROLIEiJ_G0022627	Trpt1	83	40.000	Mus_caroli
ENSCSAVG00000011071	-	65	40.000	ENSMUSG00000047656	Trpt1	83	40.000	Mus_musculus
ENSCSAVG00000011071	-	65	40.000	MGP_PahariEiJ_G0014121	Trpt1	83	40.000	Mus_pahari
ENSCSAVG00000011071	-	65	40.000	MGP_SPRETEiJ_G0023537	Trpt1	83	40.000	Mus_spretus
ENSCSAVG00000011071	-	63	42.365	ENSMPUG00000013272	TRPT1	73	42.365	Mustela_putorius_furo
ENSCSAVG00000011071	-	60	44.845	ENSMLUG00000024858	TRPT1	81	43.478	Myotis_lucifugus
ENSCSAVG00000011071	-	53	42.262	ENSNGAG00000007665	Trpt1	80	42.262	Nannospalax_galili
ENSCSAVG00000011071	-	60	40.097	ENSNBRG00000001528	trpt1	88	39.171	Neolamprologus_brichardi
ENSCSAVG00000011071	-	64	33.654	ENSNLEG00000033525	-	80	33.654	Nomascus_leucogenys
ENSCSAVG00000011071	-	60	42.268	ENSMEUG00000000943	TRPT1	82	40.952	Notamacropus_eugenii
ENSCSAVG00000011071	-	67	43.981	ENSOPRG00000015917	TRPT1	84	43.981	Ochotona_princeps
ENSCSAVG00000011071	-	64	42.857	ENSODEG00000015724	TRPT1	83	42.857	Octodon_degus
ENSCSAVG00000011071	-	60	43.005	ENSONIG00000005333	trpt1	87	41.872	Oreochromis_niloticus
ENSCSAVG00000011071	-	61	41.919	ENSOANG00000010375	TRPT1	93	40.465	Ornithorhynchus_anatinus
ENSCSAVG00000011071	-	64	42.512	ENSOCUG00000022244	TRPT1	81	42.512	Oryctolagus_cuniculus
ENSCSAVG00000011071	-	64	40.291	ENSORLG00000025159	trpt1	91	40.291	Oryzias_latipes
ENSCSAVG00000011071	-	64	41.262	ENSORLG00020018944	trpt1	91	41.262	Oryzias_latipes_hni
ENSCSAVG00000011071	-	55	41.714	ENSORLG00015017108	trpt1	76	41.714	Oryzias_latipes_hsok
ENSCSAVG00000011071	-	64	40.291	ENSOMEG00000018645	trpt1	91	40.291	Oryzias_melastigma
ENSCSAVG00000011071	-	64	42.718	ENSOGAG00000007134	TRPT1	81	42.718	Otolemur_garnettii
ENSCSAVG00000011071	-	64	42.308	ENSOARG00000004961	TRPT1	81	42.308	Ovis_aries
ENSCSAVG00000011071	-	52	43.030	ENSPPAG00000027600	TRPT1	79	43.030	Pan_paniscus
ENSCSAVG00000011071	-	52	43.636	ENSPPRG00000022870	TRPT1	79	43.636	Panthera_pardus
ENSCSAVG00000011071	-	51	43.902	ENSPTIG00000018872	TRPT1	79	43.902	Panthera_tigris_altaica
ENSCSAVG00000011071	-	52	43.030	ENSPTRG00000003822	TRPT1	79	43.030	Pan_troglodytes
ENSCSAVG00000011071	-	64	41.148	ENSPANG00000011001	TRPT1	81	41.148	Papio_anubis
ENSCSAVG00000011071	-	60	40.000	ENSPKIG00000008323	trpt1	87	38.725	Paramormyrops_kingsleyae
ENSCSAVG00000011071	-	74	39.583	ENSPSIG00000009910	TRPT1	97	39.583	Pelodiscus_sinensis
ENSCSAVG00000011071	-	63	43.204	ENSPMGG00000005037	trpt1	87	43.204	Periophthalmus_magnuspinnatus
ENSCSAVG00000011071	-	78	40.000	ENSPEMG00000013720	Trpt1	93	40.000	Peromyscus_maniculatus_bairdii
ENSCSAVG00000011071	-	60	43.299	ENSPMAG00000001449	trpt1	90	43.299	Petromyzon_marinus
ENSCSAVG00000011071	-	60	43.005	ENSPCIG00000008060	TRPT1	80	42.000	Phascolarctos_cinereus
ENSCSAVG00000011071	-	60	42.051	ENSPFOG00000009475	trpt1	90	40.777	Poecilia_formosa
ENSCSAVG00000011071	-	61	41.327	ENSPMEG00000003682	trpt1	90	40.291	Poecilia_mexicana
ENSCSAVG00000011071	-	60	42.564	ENSPREG00000015408	trpt1	90	41.262	Poecilia_reticulata
ENSCSAVG00000011071	-	60	43.814	ENSPPYG00000003116	TRPT1	81	42.512	Pongo_abelii
ENSCSAVG00000011071	-	61	42.051	ENSPCAG00000000762	TRPT1	76	42.051	Procavia_capensis
ENSCSAVG00000011071	-	67	41.475	ENSPCOG00000010370	TRPT1	85	41.475	Propithecus_coquereli
ENSCSAVG00000011071	-	60	39.614	ENSPNYG00000014805	trpt1	88	38.710	Pundamilia_nyererei
ENSCSAVG00000011071	-	60	43.523	ENSPNAG00000008548	trpt1	85	42.857	Pygocentrus_nattereri
ENSCSAVG00000011071	-	65	39.524	ENSRNOG00000023023	Trpt1	83	39.524	Rattus_norvegicus
ENSCSAVG00000011071	-	64	41.546	ENSRBIG00000040432	TRPT1	81	41.546	Rhinopithecus_bieti
ENSCSAVG00000011071	-	64	42.512	ENSRROG00000044905	TRPT1	81	42.512	Rhinopithecus_roxellana
ENSCSAVG00000011071	-	57	36.559	YOL102C	TPT1	80	36.559	Saccharomyces_cerevisiae
ENSCSAVG00000011071	-	64	42.029	ENSSBOG00000021466	TRPT1	81	42.029	Saimiri_boliviensis_boliviensis
ENSCSAVG00000011071	-	60	40.415	ENSSFOG00015005844	trpt1	88	39.109	Scleropages_formosus
ENSCSAVG00000011071	-	60	45.596	ENSSMAG00000017744	trpt1	88	44.335	Scophthalmus_maximus
ENSCSAVG00000011071	-	60	41.969	ENSSDUG00000017106	trpt1	88	40.887	Seriola_dumerili
ENSCSAVG00000011071	-	59	42.932	ENSSLDG00000015957	trpt1	86	41.584	Seriola_lalandi_dorsalis
ENSCSAVG00000011071	-	52	45.783	ENSSPAG00000007557	trpt1	66	45.783	Stegastes_partitus
ENSCSAVG00000011071	-	64	42.029	ENSSSCG00000013040	TRPT1	78	42.029	Sus_scrofa
ENSCSAVG00000011071	-	60	41.026	ENSTRUG00000023723	trpt1	90	39.623	Takifugu_rubripes
ENSCSAVG00000011071	-	59	41.361	ENSTNIG00000003381	trpt1	89	40.385	Tetraodon_nigroviridis
ENSCSAVG00000011071	-	61	41.538	ENSTBEG00000006023	TRPT1	76	41.538	Tupaia_belangeri
ENSCSAVG00000011071	-	64	42.029	ENSTTRG00000010252	TRPT1	81	42.029	Tursiops_truncatus
ENSCSAVG00000011071	-	63	43.350	ENSUAMG00000015208	TRPT1	79	43.350	Ursus_americanus
ENSCSAVG00000011071	-	63	43.350	ENSUMAG00000001410	TRPT1	79	43.350	Ursus_maritimus
ENSCSAVG00000011071	-	63	43.269	ENSVVUG00000029774	TRPT1	84	43.269	Vulpes_vulpes
ENSCSAVG00000011071	-	63	39.901	ENSXETG00000007196	trpt1	87	39.901	Xenopus_tropicalis
ENSCSAVG00000011071	-	61	41.117	ENSXCOG00000001614	trpt1	94	41.038	Xiphophorus_couchianus
ENSCSAVG00000011071	-	60	42.564	ENSXMAG00000003142	trpt1	89	42.233	Xiphophorus_maculatus